| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026136
Identifier: 124026136
GI number: 124026136
Start: 1156846
End: 1157232
Strand: Direct
Name: 124026136
Synonym: NATL1_14291
Alternate gene names: NA
Gene position: 1156846-1157232 (Clockwise)
Preceding gene: 124026135
Following gene: 124026137
Centisome position: 62.04
GC content: 38.24
Gene sequence:
>387_bases ATGTCATTCGGAGCCGAGACGCCCTTTATTCTTCTTGCTCGTATTCAAGTTAAGCCAGACAAAGTTCAAGAATATTTATT ACTTGCAGCTAAAACTGATAAAGCTGTTGAAGATTCAGAACCAGGAATGATTCACCATACTTTTGATCAAGATCCTGAAG ATCCTCTTTGTTTTGTTTGGTCCGAAGTTTATAAAAATGACGAGGCTTTCCTTGCTCATCTAGCAAATCCACCTGTAGGA GAATATTTACAAGGTCATGCAGAACTTGGCGATAATTTCACTGTGGAAGTTTATGGAACTGTTGGAGATAAATGTAAAGC AGCTATGGAAGCAACTGGATTGCCATTAAAAATCTTTGAAAGCAAGCTTGGCTATAGCAGAGTCTAA
Upstream 100 bases:
>100_bases GGTAAATAAGTACTTTTGTTAGAAGAGCCTGAAGAGATGGCCTTCAATACTGAAACTTTAAGAGAAATATGTAATGGTGA GATTTAACTGAAATAAATTA
Downstream 100 bases:
>100_bases TTAAATGGAAAAACTATTTATTATTTGTACTTTTGACTGCTCGTTTGAGTACTACGAAGAAACTATAGAAAAGTTTGTCA AAGAATATGGAGATGGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSFGAETPFILLARIQVKPDKVQEYLLLAAKTDKAVEDSEPGMIHHTFDQDPEDPLCFVWSEVYKNDEAFLAHLANPPVG EYLQGHAELGDNFTVEVYGTVGDKCKAAMEATGLPLKIFESKLGYSRV
Sequences:
>Translated_128_residues MSFGAETPFILLARIQVKPDKVQEYLLLAAKTDKAVEDSEPGMIHHTFDQDPEDPLCFVWSEVYKNDEAFLAHLANPPVG EYLQGHAELGDNFTVEVYGTVGDKCKAAMEATGLPLKIFESKLGYSRV >Mature_127_residues SFGAETPFILLARIQVKPDKVQEYLLLAAKTDKAVEDSEPGMIHHTFDQDPEDPLCFVWSEVYKNDEAFLAHLANPPVGE YLQGHAELGDNFTVEVYGTVGDKCKAAMEATGLPLKIFESKLGYSRV
Specific function: Unknown
COG id: COG1359
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14205; Mature: 14074
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFGAETPFILLARIQVKPDKVQEYLLLAAKTDKAVEDSEPGMIHHTFDQDPEDPLCFVW CCCCCCCCEEEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE SEVYKNDEAFLAHLANPPVGEYLQGHAELGDNFTVEVYGTVGDKCKAAMEATGLPLKIFE HHHHCCCHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHH SKLGYSRV HCCCCCCC >Mature Secondary Structure SFGAETPFILLARIQVKPDKVQEYLLLAAKTDKAVEDSEPGMIHHTFDQDPEDPLCFVW CCCCCCCEEEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE SEVYKNDEAFLAHLANPPVGEYLQGHAELGDNFTVEVYGTVGDKCKAAMEATGLPLKIFE HHHHCCCHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHH SKLGYSRV HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA