| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026078
Identifier: 124026078
GI number: 124026078
Start: 1131575
End: 1132333
Strand: Direct
Name: 124026078
Synonym: NATL1_13711
Alternate gene names: NA
Gene position: 1131575-1132333 (Clockwise)
Preceding gene: 124026077
Following gene: 124026080
Centisome position: 60.68
GC content: 38.21
Gene sequence:
>759_bases TTGAGTGCACCTTTATTTTCAAGTGTTAGGTCTGGAGATACCATTCTGGTTGGCGAGAATGAAATATGCAAAGTTCTTTC ATTTACTGGAGGTTCTAGAGATCCAGACGCTCCCTCACTATTCAAAGTGGCGAATGTTGATACAGGAGAAATTAAGCACG TTCATGCTGCTGAAGTGAAAGAGATAGTTTGCAGATGGGAGAAGGAAAGACTGAATCTTCCTGCTGAATTGCCACTAAGT AACTTCCTTCCAACGGTTGAAAACTATGAGAAAAAAGTAAGTAAAATGAAATTGAGAGGCAATGAGGAAAGCAAAGATTG GAAAGCCCTACATCATATAACTGAACCTGAAGTCCATCCAAAGAAATATTTTGACCAGATAGAGGTGTTTGGATCCATGG AGAAGCGTTCATGGATCCATGGTCCAAAGTCACCAAAAAGATTCTTTATAAATGAATCAAAATGTCCTGTAAGAAACCCC TTCGACAGAATCGATGGCGTAGTAAGGGAAGAGGGAATAAAAATGTTTGATGGTTTGGTTTGGCAGAGTTGGCATGAAGA TGGAAATATTCCAAAAGAAGCTAAAGAGTGGTTTGATGCAAGAGTGGAAGATTTTATAGCTGGAACAGATATTGATCTTG TTTGTAATTGTCGAAGATTTAGAGGTCAAGATGATTCTGTAGGTCTACAAGCTAAACACCCTTGCGATTGTCATGGCTAT ACATTGAAAAAATATATTGAATTTTTAGCTGACAATTAG
Upstream 100 bases:
>100_bases GGCACACATTCGAAGTTCACTTAGAAAGTTATTCCCGATTTATTCCAGGCGTAACTACTGATTGATACGCTAAAAAGAAT TAAGCCGCCAAAATCACAGT
Downstream 100 bases:
>100_bases GAACAAGAATTTCCTTTGCCTAGTCTTCAAGCCATAGACCACGGACTGACATTTTCATGTCAGTCGAAAACAAAATCAAA TCTCTGCCTATAAAGGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSAPLFSSVRSGDTILVGENEICKVLSFTGGSRDPDAPSLFKVANVDTGEIKHVHAAEVKEIVCRWEKERLNLPAELPLS NFLPTVENYEKKVSKMKLRGNEESKDWKALHHITEPEVHPKKYFDQIEVFGSMEKRSWIHGPKSPKRFFINESKCPVRNP FDRIDGVVREEGIKMFDGLVWQSWHEDGNIPKEAKEWFDARVEDFIAGTDIDLVCNCRRFRGQDDSVGLQAKHPCDCHGY TLKKYIEFLADN
Sequences:
>Translated_252_residues MSAPLFSSVRSGDTILVGENEICKVLSFTGGSRDPDAPSLFKVANVDTGEIKHVHAAEVKEIVCRWEKERLNLPAELPLS NFLPTVENYEKKVSKMKLRGNEESKDWKALHHITEPEVHPKKYFDQIEVFGSMEKRSWIHGPKSPKRFFINESKCPVRNP FDRIDGVVREEGIKMFDGLVWQSWHEDGNIPKEAKEWFDARVEDFIAGTDIDLVCNCRRFRGQDDSVGLQAKHPCDCHGY TLKKYIEFLADN >Mature_251_residues SAPLFSSVRSGDTILVGENEICKVLSFTGGSRDPDAPSLFKVANVDTGEIKHVHAAEVKEIVCRWEKERLNLPAELPLSN FLPTVENYEKKVSKMKLRGNEESKDWKALHHITEPEVHPKKYFDQIEVFGSMEKRSWIHGPKSPKRFFINESKCPVRNPF DRIDGVVREEGIKMFDGLVWQSWHEDGNIPKEAKEWFDARVEDFIAGTDIDLVCNCRRFRGQDDSVGLQAKHPCDCHGYT LKKYIEFLADN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28907; Mature: 28776
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPLFSSVRSGDTILVGENEICKVLSFTGGSRDPDAPSLFKVANVDTGEIKHVHAAEVK CCCCCCHHHCCCCEEEECCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHH EIVCRWEKERLNLPAELPLSNFLPTVENYEKKVSKMKLRGNEESKDWKALHHITEPEVHP HHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCH KKYFDQIEVFGSMEKRSWIHGPKSPKRFFINESKCPVRNPFDRIDGVVREEGIKMFDGLV HHHHHHHHHHHCHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH WQSWHEDGNIPKEAKEWFDARVEDFIAGTDIDLVCNCRRFRGQDDSVGLQAKHPCDCHGY HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHEEECHHHHCCCCCCCCCCCCCCCCCCCC TLKKYIEFLADN HHHHHHHHHCCC >Mature Secondary Structure SAPLFSSVRSGDTILVGENEICKVLSFTGGSRDPDAPSLFKVANVDTGEIKHVHAAEVK CCCCCHHHCCCCEEEECCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHH EIVCRWEKERLNLPAELPLSNFLPTVENYEKKVSKMKLRGNEESKDWKALHHITEPEVHP HHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCH KKYFDQIEVFGSMEKRSWIHGPKSPKRFFINESKCPVRNPFDRIDGVVREEGIKMFDGLV HHHHHHHHHHHCHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH WQSWHEDGNIPKEAKEWFDARVEDFIAGTDIDLVCNCRRFRGQDDSVGLQAKHPCDCHGY HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHEEECHHHHCCCCCCCCCCCCCCCCCCCC TLKKYIEFLADN HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA