| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026035
Identifier: 124026035
GI number: 124026035
Start: 1113961
End: 1114500
Strand: Reverse
Name: 124026035
Synonym: NATL1_13281
Alternate gene names: NA
Gene position: 1114500-1113961 (Counterclockwise)
Preceding gene: 124026036
Following gene: 124026031
Centisome position: 59.77
GC content: 33.15
Gene sequence:
>540_bases ATGAATAGCATTTCAAAATTAATAGAAACTCTTGAGAAATCGCCTAAATCAAAAAAAATAGAAAAATTGATCAAATTATC GGAAATTGAATCTGCTGTAGACATACCAAATCAATTTGAGAAGCTTCTAGGAGTTTGGGAATTGAGGTGGAGTAGCTCGA AATCTCCTGTTCTAAATTATTCTCCGTTATTAAATAATTTTCAAATATTAGACCTAGACAAAAGCAGAGCACTTAACTTT CTGAGCCCTAAGGGATTTCTTGGCAAACTTTTATCGACTAATATCTTGGCAAAGTTGGATATTATTGATCAAAAACGCAT AAACGTTACCTTTGAAAAAGCAGGGATAATAGGACCACAGGTGTTTGGTAAAAATATGGTCTTTTTATCGGAAATTAAAA AAGCTCAAACGGGTTGGCTAGATACAACCGTTTTGACTGATAAATTGCGAGTATGTAGAGGTTATAAGGGGACAACGTTT GCGTTGCTAAAAAGAGAGGATCTTTTGATAGCCGATTTTTTTAATCCTATAAACAATTAA
Upstream 100 bases:
>100_bases CATTTGTTCAAGTAGAGAGACTGAAAAATTATTTCACTCTCTCTACTTCATAGAAGCAGTTTTATCATCATCTTTATTTT AATAATCAATGGGTTAAATT
Downstream 100 bases:
>100_bases GTACGTCTACCTTTTATATATGTTCTCATCAAAAACATATGTTGTCTTAAATTTTTGTTATTCGCCAAGTGCTAAAAAAA CCATTATTTGGTGGATTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MNSISKLIETLEKSPKSKKIEKLIKLSEIESAVDIPNQFEKLLGVWELRWSSSKSPVLNYSPLLNNFQILDLDKSRALNF LSPKGFLGKLLSTNILAKLDIIDQKRINVTFEKAGIIGPQVFGKNMVFLSEIKKAQTGWLDTTVLTDKLRVCRGYKGTTF ALLKREDLLIADFFNPINN
Sequences:
>Translated_179_residues MNSISKLIETLEKSPKSKKIEKLIKLSEIESAVDIPNQFEKLLGVWELRWSSSKSPVLNYSPLLNNFQILDLDKSRALNF LSPKGFLGKLLSTNILAKLDIIDQKRINVTFEKAGIIGPQVFGKNMVFLSEIKKAQTGWLDTTVLTDKLRVCRGYKGTTF ALLKREDLLIADFFNPINN >Mature_179_residues MNSISKLIETLEKSPKSKKIEKLIKLSEIESAVDIPNQFEKLLGVWELRWSSSKSPVLNYSPLLNNFQILDLDKSRALNF LSPKGFLGKLLSTNILAKLDIIDQKRINVTFEKAGIIGPQVFGKNMVFLSEIKKAQTGWLDTTVLTDKLRVCRGYKGTTF ALLKREDLLIADFFNPINN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20272; Mature: 20272
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSISKLIETLEKSPKSKKIEKLIKLSEIESAVDIPNQFEKLLGVWELRWSSSKSPVLNY CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCEEC SPLLNNFQILDLDKSRALNFLSPKGFLGKLLSTNILAKLDIIDQKRINVTFEKAGIIGPQ CCCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH VFGKNMVFLSEIKKAQTGWLDTTVLTDKLRVCRGYKGTTFALLKREDLLIADFFNPINN HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCC >Mature Secondary Structure MNSISKLIETLEKSPKSKKIEKLIKLSEIESAVDIPNQFEKLLGVWELRWSSSKSPVLNY CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCEEC SPLLNNFQILDLDKSRALNFLSPKGFLGKLLSTNILAKLDIIDQKRINVTFEKAGIIGPQ CCCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH VFGKNMVFLSEIKKAQTGWLDTTVLTDKLRVCRGYKGTTFALLKREDLLIADFFNPINN HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA