Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124026001

Identifier: 124026001

GI number: 124026001

Start: 1098041

End: 1098499

Strand: Reverse

Name: 124026001

Synonym: NATL1_12941

Alternate gene names: NA

Gene position: 1098499-1098041 (Counterclockwise)

Preceding gene: 124026004

Following gene: 124026000

Centisome position: 58.91

GC content: 32.46

Gene sequence:

>459_bases
ATGATCAAAACAATAATAAGAGCGATGTATTCTGCTTTTATTTCTATTGTCTTAATCTCAATTATTCTGGCTGGCTGGAC
TTGTTTTGCATTTATTTCCCAACCCACAAAATCTGGGGAAATAATTAATTTGATACAAGATATGTATGAAGGTCAGAAGT
CGGTAATCATAAACGTTGTTGATCTTTCGAAATTACTAATAAAGGATAATAGTGAAAGAATAGCGAGCGAAGATAATAAT
CTTTTAACAGAATCAGAATTGCTGATTGATCAAGAAGACAATTCACTATTAGATGAGCCCTCAATTCTAGAAGACAATGG
TGATAATCCTCTTGGGATAGTTATTGAACCATCTTTACCTGAAGTAATCGAAGAAAATTTGCCTGAAATTAGTGAAGCAC
CATTAGATAATGATCAGAGTGAGGTTCCTATGAATGAAATGGAAATGGATATGAATTAA

Upstream 100 bases:

>100_bases
GAGTAAACCGCAAAGTATTTATACGCCTTTACAGGGTGTGAAGAGGTCGTTTTAAGTATCAAATGATGTGCCTAGATTTA
ACAATATCTAAAGTTCCCGA

Downstream 100 bases:

>100_bases
CTTAGTTAAACGGACTTTCTGAAAAGTGTTTAATATTGATTTGTTTCTTATTTGTACTTATGAATAAAATTCTTCCTTTA
ATACTAGCCTTTTCTGTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MIKTIIRAMYSAFISIVLISIILAGWTCFAFISQPTKSGEIINLIQDMYEGQKSVIINVVDLSKLLIKDNSERIASEDNN
LLTESELLIDQEDNSLLDEPSILEDNGDNPLGIVIEPSLPEVIEENLPEISEAPLDNDQSEVPMNEMEMDMN

Sequences:

>Translated_152_residues
MIKTIIRAMYSAFISIVLISIILAGWTCFAFISQPTKSGEIINLIQDMYEGQKSVIINVVDLSKLLIKDNSERIASEDNN
LLTESELLIDQEDNSLLDEPSILEDNGDNPLGIVIEPSLPEVIEENLPEISEAPLDNDQSEVPMNEMEMDMN
>Mature_152_residues
MIKTIIRAMYSAFISIVLISIILAGWTCFAFISQPTKSGEIINLIQDMYEGQKSVIINVVDLSKLLIKDNSERIASEDNN
LLTESELLIDQEDNSLLDEPSILEDNGDNPLGIVIEPSLPEVIEENLPEISEAPLDNDQSEVPMNEMEMDMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16969; Mature: 16969

Theoretical pI: Translated: 3.54; Mature: 3.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTIIRAMYSAFISIVLISIILAGWTCFAFISQPTKSGEIINLIQDMYEGQKSVIINVV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHEEEHHH
DLSKLLIKDNSERIASEDNNLLTESELLIDQEDNSLLDEPSILEDNGDNPLGIVIEPSLP
HHHHHHHCCCCHHHHCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCH
EVIEENLPEISEAPLDNDQSEVPMNEMEMDMN
HHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MIKTIIRAMYSAFISIVLISIILAGWTCFAFISQPTKSGEIINLIQDMYEGQKSVIINVV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHEEEHHH
DLSKLLIKDNSERIASEDNNLLTESELLIDQEDNSLLDEPSILEDNGDNPLGIVIEPSLP
HHHHHHHCCCCHHHHCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCH
EVIEENLPEISEAPLDNDQSEVPMNEMEMDMN
HHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA