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The map label for this gene is ydiU [C]

Identifier: 124025991

GI number: 124025991

Start: 1093809

End: 1095503

Strand: Direct

Name: ydiU [C]

Synonym: NATL1_12841

Alternate gene names: 124025991

Gene position: 1093809-1095503 (Clockwise)

Preceding gene: 124025990

Following gene: 124025993

Centisome position: 58.66

GC content: 42.71

Gene sequence:

>1695_bases
ATGAGCAGTACTGAAGCTATGCCGAAAACAAGAACTTTTTCTGAGTTTGCGAAACAGGCTGACTACTCACTCATGGATTC
ACTCGAAGCTGACCCTCAGGCAACTGACGATGGTGACGACCACCTAACACGAGAAGTCTTTTCTGGTCACTATGTACCTG
TCACACCAACACCGATTTCAAAGCCGGAATATGTTACGCACAGTAAAACATTATTTAACGAATTAGGTCTTAGTCAGGAA
CTTGCTCTAGATGAACTTTTTCGTCGTCTATTTTCAGGCGATATAAGCGTTGCGACAGCACCTATGCGACCAGTTGGTTG
GGCTACTGGTTACGCACTATCGATCTATGGAACTGAATATACTCAGCAGTGTCCATTTGGGACAGGTAACGGCTATGGAG
ATGGTAGAGCAATTTCAGTATTTGAAGGTCTATTTAATGGCAAAAGATGGGAGATGCAACTTAAGGGAGGAGGCCCTACA
CCATACTGCAGAGGAGCTGATGGACGAGCAGTTCTACGTTCAAGTGTTCGAGAGTTTTTAGCGCAGGATTATATGCAGTC
ACTCGGAGTACCAACATCACGATCTCTCACACTATATGCCTCTAGAGCTGAAACAGTCCGCAGGCCTTGGTATACAAAAG
ACTCAAATTCAATCAATCCAGACATATTGGTAGAGACCCCAGCCGCAATCTCAACACGAGTCGCACCATCATTTTTACGG
GTAGGTCAGATAGAACTCTTTGCACGTCGAGTACGCAACAATGAGCATCAAGATGCAATGAAAGAGCTTGAAATGATTGT
GAAGCACTTAATTGTTAGAAATTATAAGAAAGAAATTGATCCGACTCTTAGCTTGAGCAATCAAGTCGTTGAGCTTTCAA
ATTCTTTCCGAGAACGACTAACATCATTAGTAGCCAATTGGATGCGGGTCGGCTACTGCCAAGGAAATTTCAACAGTGAT
AACTGTGCTGCAGGTGGTTTCACCCTCGATTATGGTCCATTTGGATTTTGCGAACTCTTCGATCCAAGATTCCAACCTTG
GACAGGAGGTGGTGAACATTTTGCATTCTTCAACCAACAAGTTGCAGCCGAAACAAATTTTCAAATGTTTTGTGGGGCTC
TTCGACCTTTGCTTAATGGCAACGCAGAGTCACTGGAGAGGCTCGATAGTATCCGTAATGGTTTTACTACAGTCATGAAT
CAGAAAATGGAGAGAATGTGGGCAAAGAAATTAGGCCTAGTCACCTATGACGCACCTTTAGTAAATGAAATGCTACGGCT
CATGGTTCACACAAAGGTGGACTACACAATCTTTTTCCGAAAACTTTCAAGTATTCCAAACAAACTTACGGACTTAAAAG
ATAGTTTCTATCTACCAATTTCAGAAGAGACTGAGAGCAAGTGGATCAGTTGGCTACAAAGATGGCGGGAGCAAGTAATA
AGCAAAGGTGATCAAAATGAAATTTCGGCAAAGATGAAAAGCATTAATCCTAAATACACTTGGCGGGAATGGCTCATTAC
ACCAGCATACGAAAAGGCAGAGGAAGGCGATTATGGCCTCATAAAAGAGCTACAAGCTGTTTTAGATAAACCTTACGAGG
AGCAATCATCAAAAGTACAGAAAAAATATGACAGACTTAAGCCCAAGAAATTCTTTGGAGCTGGGGGAGTTTCCCATTAC
AGCTGTTCATCATGA

Upstream 100 bases:

>100_bases
AAAATAAAATTTTTCAACATTAAAGCTACGGATCTATGCTACAAATATAAATGAAAGAATCTTCAAATTTAAATACTTAA
GTAACCACCAATAGGTCTGA

Downstream 100 bases:

>100_bases
AATAAAACCAAAATTCAAATTCTACGTAGCAAGGGTTGCGAATTAAAAAAAAGCTTAATTATCCTCAATAGGAAAAGCAA
ACATAAAAAGATTCTTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 563

Protein sequence:

>564_residues
MSSTEAMPKTRTFSEFAKQADYSLMDSLEADPQATDDGDDHLTREVFSGHYVPVTPTPISKPEYVTHSKTLFNELGLSQE
LALDELFRRLFSGDISVATAPMRPVGWATGYALSIYGTEYTQQCPFGTGNGYGDGRAISVFEGLFNGKRWEMQLKGGGPT
PYCRGADGRAVLRSSVREFLAQDYMQSLGVPTSRSLTLYASRAETVRRPWYTKDSNSINPDILVETPAAISTRVAPSFLR
VGQIELFARRVRNNEHQDAMKELEMIVKHLIVRNYKKEIDPTLSLSNQVVELSNSFRERLTSLVANWMRVGYCQGNFNSD
NCAAGGFTLDYGPFGFCELFDPRFQPWTGGGEHFAFFNQQVAAETNFQMFCGALRPLLNGNAESLERLDSIRNGFTTVMN
QKMERMWAKKLGLVTYDAPLVNEMLRLMVHTKVDYTIFFRKLSSIPNKLTDLKDSFYLPISEETESKWISWLQRWREQVI
SKGDQNEISAKMKSINPKYTWREWLITPAYEKAEEGDYGLIKELQAVLDKPYEEQSSKVQKKYDRLKPKKFFGAGGVSHY
SCSS

Sequences:

>Translated_564_residues
MSSTEAMPKTRTFSEFAKQADYSLMDSLEADPQATDDGDDHLTREVFSGHYVPVTPTPISKPEYVTHSKTLFNELGLSQE
LALDELFRRLFSGDISVATAPMRPVGWATGYALSIYGTEYTQQCPFGTGNGYGDGRAISVFEGLFNGKRWEMQLKGGGPT
PYCRGADGRAVLRSSVREFLAQDYMQSLGVPTSRSLTLYASRAETVRRPWYTKDSNSINPDILVETPAAISTRVAPSFLR
VGQIELFARRVRNNEHQDAMKELEMIVKHLIVRNYKKEIDPTLSLSNQVVELSNSFRERLTSLVANWMRVGYCQGNFNSD
NCAAGGFTLDYGPFGFCELFDPRFQPWTGGGEHFAFFNQQVAAETNFQMFCGALRPLLNGNAESLERLDSIRNGFTTVMN
QKMERMWAKKLGLVTYDAPLVNEMLRLMVHTKVDYTIFFRKLSSIPNKLTDLKDSFYLPISEETESKWISWLQRWREQVI
SKGDQNEISAKMKSINPKYTWREWLITPAYEKAEEGDYGLIKELQAVLDKPYEEQSSKVQKKYDRLKPKKFFGAGGVSHY
SCSS
>Mature_563_residues
SSTEAMPKTRTFSEFAKQADYSLMDSLEADPQATDDGDDHLTREVFSGHYVPVTPTPISKPEYVTHSKTLFNELGLSQEL
ALDELFRRLFSGDISVATAPMRPVGWATGYALSIYGTEYTQQCPFGTGNGYGDGRAISVFEGLFNGKRWEMQLKGGGPTP
YCRGADGRAVLRSSVREFLAQDYMQSLGVPTSRSLTLYASRAETVRRPWYTKDSNSINPDILVETPAAISTRVAPSFLRV
GQIELFARRVRNNEHQDAMKELEMIVKHLIVRNYKKEIDPTLSLSNQVVELSNSFRERLTSLVANWMRVGYCQGNFNSDN
CAAGGFTLDYGPFGFCELFDPRFQPWTGGGEHFAFFNQQVAAETNFQMFCGALRPLLNGNAESLERLDSIRNGFTTVMNQ
KMERMWAKKLGLVTYDAPLVNEMLRLMVHTKVDYTIFFRKLSSIPNKLTDLKDSFYLPISEETESKWISWLQRWREQVIS
KGDQNEISAKMKSINPKYTWREWLITPAYEKAEEGDYGLIKELQAVLDKPYEEQSSKVQKKYDRLKPKKFFGAGGVSHYS
CSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=429, Percent_Identity=32.6340326340326, Blast_Score=160, Evalue=4e-39,
Organism=Escherichia coli, GI1787999, Length=503, Percent_Identity=30.4174950298211, Blast_Score=187, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6325034, Length=411, Percent_Identity=26.5206812652068, Blast_Score=126, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 64006; Mature: 63875

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTEAMPKTRTFSEFAKQADYSLMDSLEADPQATDDGDDHLTREVFSGHYVPVTPTPIS
CCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCC
KPEYVTHSKTLFNELGLSQELALDELFRRLFSGDISVATAPMRPVGWATGYALSIYGTEY
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCH
TQQCPFGTGNGYGDGRAISVFEGLFNGKRWEMQLKGGGPTPYCRGADGRAVLRSSVREFL
HCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
AQDYMQSLGVPTSRSLTLYASRAETVRRPWYTKDSNSINPDILVETPAAISTRVAPSFLR
HHHHHHHCCCCCCCCEEEEECHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHCHHHHH
VGQIELFARRVRNNEHQDAMKELEMIVKHLIVRNYKKEIDPTLSLSNQVVELSNSFRERL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
TSLVANWMRVGYCQGNFNSDNCAAGGFTLDYGPFGFCELFDPRFQPWTGGGEHFAFFNQQ
HHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCEEHHHHHH
VAAETNFQMFCGALRPLLNGNAESLERLDSIRNGFTTVMNQKMERMWAKKLGLVTYDAPL
HHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHH
VNEMLRLMVHTKVDYTIFFRKLSSIPNKLTDLKDSFYLPISEETESKWISWLQRWREQVI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHH
SKGDQNEISAKMKSINPKYTWREWLITPAYEKAEEGDYGLIKELQAVLDKPYEEQSSKVQ
CCCCHHHHHHHHHHCCCCCCHHHHEECCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHH
KKYDRLKPKKFFGAGGVSHYSCSS
HHHHHCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SSTEAMPKTRTFSEFAKQADYSLMDSLEADPQATDDGDDHLTREVFSGHYVPVTPTPIS
CCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCC
KPEYVTHSKTLFNELGLSQELALDELFRRLFSGDISVATAPMRPVGWATGYALSIYGTEY
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCH
TQQCPFGTGNGYGDGRAISVFEGLFNGKRWEMQLKGGGPTPYCRGADGRAVLRSSVREFL
HCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
AQDYMQSLGVPTSRSLTLYASRAETVRRPWYTKDSNSINPDILVETPAAISTRVAPSFLR
HHHHHHHCCCCCCCCEEEEECHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHCHHHHH
VGQIELFARRVRNNEHQDAMKELEMIVKHLIVRNYKKEIDPTLSLSNQVVELSNSFRERL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
TSLVANWMRVGYCQGNFNSDNCAAGGFTLDYGPFGFCELFDPRFQPWTGGGEHFAFFNQQ
HHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCEEHHHHHH
VAAETNFQMFCGALRPLLNGNAESLERLDSIRNGFTTVMNQKMERMWAKKLGLVTYDAPL
HHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHH
VNEMLRLMVHTKVDYTIFFRKLSSIPNKLTDLKDSFYLPISEETESKWISWLQRWREQVI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHH
SKGDQNEISAKMKSINPKYTWREWLITPAYEKAEEGDYGLIKELQAVLDKPYEEQSSKVQ
CCCCHHHHHHHHHHCCCCCCHHHHEECCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHH
KKYDRLKPKKFFGAGGVSHYSCSS
HHHHHCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA