| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025975
Identifier: 124025975
GI number: 124025975
Start: 1087440
End: 1087655
Strand: Reverse
Name: 124025975
Synonym: NATL1_12681
Alternate gene names: NA
Gene position: 1087655-1087440 (Counterclockwise)
Preceding gene: 124025977
Following gene: 124025974
Centisome position: 58.33
GC content: 36.57
Gene sequence:
>216_bases ATGGGCAAATGGACTCCGTCACAAAAGCAAAAGTCAGGTTTAATTAGCAGAACATTCGATTTCTTTATTGATGAATTAGC TGAATTGCAGGAGGAACTCGATTGCCCAGATGAATTCATATGTGATTTTCTTGAAATTGTCAAAAATCGTTGGTCACCAG ATAGTTGTCATTCAAAGGCAAGACAGCATAAAAGAGATAATCCAATCTCCTACTAA
Upstream 100 bases:
>100_bases TAATAAACCTTCCCGTTTTTCTTTTAATAGCAGGTGTTTACCAAATTGGCTCTGCGGTAATAGTTTAGATAACTACTTTA CATAATATTTTTTATTAGTT
Downstream 100 bases:
>100_bases AAATGCAACATGAAAGTTGGCTTGTGAAGAAAGATCGTGGCTGGGCAATGAGGTTTTTTCAAGACAAACACTCTGATGAA GACGGAACTACATATATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: DDT Domain-Containing Protein-Like
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MGKWTPSQKQKSGLISRTFDFFIDELAELQEELDCPDEFICDFLEIVKNRWSPDSCHSKARQHKRDNPISY
Sequences:
>Translated_71_residues MGKWTPSQKQKSGLISRTFDFFIDELAELQEELDCPDEFICDFLEIVKNRWSPDSCHSKARQHKRDNPISY >Mature_70_residues GKWTPSQKQKSGLISRTFDFFIDELAELQEELDCPDEFICDFLEIVKNRWSPDSCHSKARQHKRDNPISY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8406; Mature: 8275
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKWTPSQKQKSGLISRTFDFFIDELAELQEELDCPDEFICDFLEIVKNRWSPDSCHSKA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHH RQHKRDNPISY HHHHCCCCCCC >Mature Secondary Structure GKWTPSQKQKSGLISRTFDFFIDELAELQEELDCPDEFICDFLEIVKNRWSPDSCHSKA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHH RQHKRDNPISY HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA