| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is 124025954
Identifier: 124025954
GI number: 124025954
Start: 1078475
End: 1078942
Strand: Reverse
Name: 124025954
Synonym: NATL1_12471
Alternate gene names: NA
Gene position: 1078942-1078475 (Counterclockwise)
Preceding gene: 124025955
Following gene: 124025952
Centisome position: 57.86
GC content: 28.42
Gene sequence:
>468_bases ATGAATATCGCTCAAACATCGCCCTTGTATGAATATTGGAATTCTGAGCAAGACGAGAATGATGAAAAAAAGAGACTGTT AAAGCTTAATCCAAAGGAACCGGCTTCTAATCTTTTTAGTAGTGAACCATACAAGTGGGAGAATCTTTATCAAAGCGTTC TTAGAAACGTTATCGATGGAGATGAATCATCATTAAAAGGGTTGATGGTTTTATTGTCTACAATCAGTAAAAAGGAGAAA GTTATAGTCCTTAACTCTCTAGAGACTTTTTTAAATAAGCATACAATTTATAAATTGAGAAATGAAAATTATTATGATCT AAAGTCCAGTAAAAATTTTTATACTACGTTAAGAATATTCTTGACTATTTTTATCAATCCATATGAATTAGAATTAAAAA AAGAACCAAAACATCTTTATGAGAAAACTGGAATGTTTTTTTATAAACTTAGAAAGTTGTTTTATTAA
Upstream 100 bases:
>100_bases AGGTGAACATGCACTGCACTGGTGTGAAAATGGATACCCTGATTTGTGTAATTGCTAATTATCTATTTCTCCTTGTTAAT TATCGCTTAGCTAAATTCGC
Downstream 100 bases:
>100_bases ATAAGTGAGACTTCAATTGCTGATGAAAGATTGCAAATCATAAAATATCAATTCCAAGAAGGATAACTAATGGAGAGAAA ATTTTTCTATTAATTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MNIAQTSPLYEYWNSEQDENDEKKRLLKLNPKEPASNLFSSEPYKWENLYQSVLRNVIDGDESSLKGLMVLLSTISKKEK VIVLNSLETFLNKHTIYKLRNENYYDLKSSKNFYTTLRIFLTIFINPYELELKKEPKHLYEKTGMFFYKLRKLFY
Sequences:
>Translated_155_residues MNIAQTSPLYEYWNSEQDENDEKKRLLKLNPKEPASNLFSSEPYKWENLYQSVLRNVIDGDESSLKGLMVLLSTISKKEK VIVLNSLETFLNKHTIYKLRNENYYDLKSSKNFYTTLRIFLTIFINPYELELKKEPKHLYEKTGMFFYKLRKLFY >Mature_155_residues MNIAQTSPLYEYWNSEQDENDEKKRLLKLNPKEPASNLFSSEPYKWENLYQSVLRNVIDGDESSLKGLMVLLSTISKKEK VIVLNSLETFLNKHTIYKLRNENYYDLKSSKNFYTTLRIFLTIFINPYELELKKEPKHLYEKTGMFFYKLRKLFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18631; Mature: 18631
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIAQTSPLYEYWNSEQDENDEKKRLLKLNPKEPASNLFSSEPYKWENLYQSVLRNVIDG CCCCCCCCHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCC DESSLKGLMVLLSTISKKEKVIVLNSLETFLNKHTIYKLRNENYYDLKSSKNFYTTLRIF CHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHEEEECCCCEEECCCCCCHHHHHHHH LTIFINPYELELKKEPKHLYEKTGMFFYKLRKLFY HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNIAQTSPLYEYWNSEQDENDEKKRLLKLNPKEPASNLFSSEPYKWENLYQSVLRNVIDG CCCCCCCCHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCC DESSLKGLMVLLSTISKKEKVIVLNSLETFLNKHTIYKLRNENYYDLKSSKNFYTTLRIF CHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHEEEECCCCEEECCCCCCHHHHHHHH LTIFINPYELELKKEPKHLYEKTGMFFYKLRKLFY HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA