| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025953
Identifier: 124025953
GI number: 124025953
Start: 1078124
End: 1078408
Strand: Direct
Name: 124025953
Synonym: NATL1_12461
Alternate gene names: NA
Gene position: 1078124-1078408 (Clockwise)
Preceding gene: 124025949
Following gene: 124025958
Centisome position: 57.82
GC content: 30.88
Gene sequence:
>285_bases ATGTCTTTAGAACTTACAGAAATAGTCAAAGATTTTATAGCAACAAAACTCCTCTCAAAAGTTGAACTAGATTTTTTAGA GAGTGAACTGTGGGAAACACTCGAACATATCGATGAAATAACTTCTTTAACCTCTGCTCCAATTGATATTTCAAAAGAAT TAAAATTAAAAGATGGTTCATCATGGCATTTATGTTGTGCAGTAATACTTGATGCTGCAAGGCCACAAAAAAACTCTCGC TCTGAAAAACTTAAAAAATTAATAGAAAAATTTTCTCTCCATTAG
Upstream 100 bases:
>100_bases AATAAATAATTTAGAAAAGTGCTATCCTCAAAATAAAATAACTTTATACACACTACATGTCTTTTAAACCTATGAATTTG TCAATTAGATTAAATTAAAG
Downstream 100 bases:
>100_bases TTATCCTTCTTGGAATTGATATTTTATGATTTGCAATCTTTCATCAGCAATTGAAGTCTCACTTATTTAATAAAACAACT TTCTAAGTTTATAAAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MSLELTEIVKDFIATKLLSKVELDFLESELWETLEHIDEITSLTSAPIDISKELKLKDGSSWHLCCAVILDAARPQKNSR SEKLKKLIEKFSLH
Sequences:
>Translated_94_residues MSLELTEIVKDFIATKLLSKVELDFLESELWETLEHIDEITSLTSAPIDISKELKLKDGSSWHLCCAVILDAARPQKNSR SEKLKKLIEKFSLH >Mature_93_residues SLELTEIVKDFIATKLLSKVELDFLESELWETLEHIDEITSLTSAPIDISKELKLKDGSSWHLCCAVILDAARPQKNSRS EKLKKLIEKFSLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10740; Mature: 10608
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLELTEIVKDFIATKLLSKVELDFLESELWETLEHIDEITSLTSAPIDISKELKLKDGS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SWHLCCAVILDAARPQKNSRSEKLKKLIEKFSLH CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SLELTEIVKDFIATKLLSKVELDFLESELWETLEHIDEITSLTSAPIDISKELKLKDGS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SWHLCCAVILDAARPQKNSRSEKLKKLIEKFSLH CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA