| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025940
Identifier: 124025940
GI number: 124025940
Start: 1074158
End: 1074550
Strand: Direct
Name: 124025940
Synonym: NATL1_12331
Alternate gene names: NA
Gene position: 1074158-1074550 (Clockwise)
Preceding gene: 124025939
Following gene: 124025941
Centisome position: 57.6
GC content: 37.4
Gene sequence:
>393_bases ATGTCTTCTAAAGAAGAAATCCTCTCCATACTCGAAGCGTTTGCCTCTACAGAGAGAATGGGATCATTCTTTTTAGACAA TGCAACCGCCGACTTTTTGTTTATAAGACCAAGTGGGAATCCCTTAGATGCAAAAGGTTTTGAAAACATGTGGTCCTCAG GAGATCTTGTATTAGAAAGCGCAGAAATCACAAAGGTACACAAATTTGAACTCTTAGGTTCAAATGCTGCAATATGTGTT TTCACACTAGGCTCAAAATTTACTTATAAAGGGACTCAAAATGATGACCTCCCCACAGTTACTTCGATTTTTAAAAAGAT TGATGAAAAATGGAAAGTAGCATGGATGCAAAGATCCTCAGGCCAATCAGATATGACTTTATGGAACGAATAA
Upstream 100 bases:
>100_bases GGGTTAATTCTTTTTGTTAGTACAACAAGAAAAGATGACCAAAGAATCATCCAATATTGAGCAAATATGTAATCCTAATT TTATTGTATTTAATTGATAA
Downstream 100 bases:
>100_bases TTTATATTTCCTTCTTAATGGTTAAGTATTCGTAAATTCTATTTATATCCTTACGTCTGAAGTAATCATTCAAACATAGA GATAATTTAAAAGAGAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSSKEEILSILEAFASTERMGSFFLDNATADFLFIRPSGNPLDAKGFENMWSSGDLVLESAEITKVHKFELLGSNAAICV FTLGSKFTYKGTQNDDLPTVTSIFKKIDEKWKVAWMQRSSGQSDMTLWNE
Sequences:
>Translated_130_residues MSSKEEILSILEAFASTERMGSFFLDNATADFLFIRPSGNPLDAKGFENMWSSGDLVLESAEITKVHKFELLGSNAAICV FTLGSKFTYKGTQNDDLPTVTSIFKKIDEKWKVAWMQRSSGQSDMTLWNE >Mature_129_residues SSKEEILSILEAFASTERMGSFFLDNATADFLFIRPSGNPLDAKGFENMWSSGDLVLESAEITKVHKFELLGSNAAICVF TLGSKFTYKGTQNDDLPTVTSIFKKIDEKWKVAWMQRSSGQSDMTLWNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14575; Mature: 14443
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKEEILSILEAFASTERMGSFFLDNATADFLFIRPSGNPLDAKGFENMWSSGDLVLES CCCHHHHHHHHHHHHHHHHHHHEHCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCEEEEC AEITKVHKFELLGSNAAICVFTLGSKFTYKGTQNDDLPTVTSIFKKIDEKWKVAWMQRSS CCCCEEEEEEEECCCCEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEECCC GQSDMTLWNE CCCCCEECCC >Mature Secondary Structure SSKEEILSILEAFASTERMGSFFLDNATADFLFIRPSGNPLDAKGFENMWSSGDLVLES CCHHHHHHHHHHHHHHHHHHHEHCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCEEEEC AEITKVHKFELLGSNAAICVFTLGSKFTYKGTQNDDLPTVTSIFKKIDEKWKVAWMQRSS CCCCEEEEEEEECCCCEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEECCC GQSDMTLWNE CCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA