Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124025931

Identifier: 124025931

GI number: 124025931

Start: 1068539

End: 1068871

Strand: Reverse

Name: 124025931

Synonym: NATL1_12241

Alternate gene names: NA

Gene position: 1068871-1068539 (Counterclockwise)

Preceding gene: 124025932

Following gene: 124025930

Centisome position: 57.32

GC content: 33.33

Gene sequence:

>333_bases
ATGACAGACTCTAAATCAGGTCTTAGTCCCTGTCTTAACCCTCTGAATTGCGTTTTTTTTCAGAAAGAATTTGAGGATGT
TGAAAAGACATTTGATCAACTTGTCACGATTGCTCAGAATATTCCTAGAACCAATGTTTTAGAGAGTAATGAAAATTATT
GGAAAGCCGTTTGTCGTAGTTTGATTTTCAGATTTCCAGATGACTTGGAGATTTTAAAAATCGGTAAGAAGATTCAAATT
AAATCGGCATCAAGATATGGTGGTGGAGATCTTGGAGTTAATGGAACTAGAGTGGGAAAATTATTAACTGCTTTAGAAAA
ATTAAATAGTTAA

Upstream 100 bases:

>100_bases
TAGAGAGAACTAGACATCACTGAGTAATAAATTTATGAAAAACATGACCACAAGGACGATAAACTTTTTGTGATGATCAA
TATGTGAACTCATAGAAAAT

Downstream 100 bases:

>100_bases
CTACCAAAACTTTCATAAAACAGTCAATTAGTTGTCGTTGGTAAATATCCTAGTTATTTTTAAATAGCCGTATTAATAAA
ATGAACAGAGCACAAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTDSKSGLSPCLNPLNCVFFQKEFEDVEKTFDQLVTIAQNIPRTNVLESNENYWKAVCRSLIFRFPDDLEILKIGKKIQI
KSASRYGGGDLGVNGTRVGKLLTALEKLNS

Sequences:

>Translated_110_residues
MTDSKSGLSPCLNPLNCVFFQKEFEDVEKTFDQLVTIAQNIPRTNVLESNENYWKAVCRSLIFRFPDDLEILKIGKKIQI
KSASRYGGGDLGVNGTRVGKLLTALEKLNS
>Mature_109_residues
TDSKSGLSPCLNPLNCVFFQKEFEDVEKTFDQLVTIAQNIPRTNVLESNENYWKAVCRSLIFRFPDDLEILKIGKKIQIK
SASRYGGGDLGVNGTRVGKLLTALEKLNS

Specific function: Unknown

COG id: COG4446

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12326; Mature: 12195

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSKSGLSPCLNPLNCVFFQKEFEDVEKTFDQLVTIAQNIPRTNVLESNENYWKAVCRS
CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
LIFRFPDDLEILKIGKKIQIKSASRYGGGDLGVNGTRVGKLLTALEKLNS
HHHHCCCCHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDSKSGLSPCLNPLNCVFFQKEFEDVEKTFDQLVTIAQNIPRTNVLESNENYWKAVCRS
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
LIFRFPDDLEILKIGKKIQIKSASRYGGGDLGVNGTRVGKLLTALEKLNS
HHHHCCCCHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA