| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025921
Identifier: 124025921
GI number: 124025921
Start: 1062953
End: 1063513
Strand: Direct
Name: 124025921
Synonym: NATL1_12141
Alternate gene names: NA
Gene position: 1062953-1063513 (Clockwise)
Preceding gene: 124025920
Following gene: 124025922
Centisome position: 57.0
GC content: 36.54
Gene sequence:
>561_bases ATGCCTGAGCTAGAAAAAGTCGTTTCATCCAATGACTTTGATGATTGGTTTTCATTGAACGACACCATCATGGGTGGCTC AAGCAAGGCAGTTTGCAGAGCCTCCTCAAAAGGCCTCTCGCTAGAAGGTGTTGTAGTTGAAGAAAAAGGTGGTTTTGTTA GTTGCAAATCCCCAATATTTTCACCTCTTCTAAATTTATCGAGTTATCAAGGTTTTGAATTAAAAATTGAAGGTAAAGGT CGAACTTTAAAATTTGGAGTTTCCTGTAAGTACGGAATTTTAGGCTTAAAAGAATTTTTCTTAAACAAGTCACCTGGTGG GCTCAGATGGGTAGCAGAAATAGATACAAAAAGATTTGGGACAACTACTATCAAAGTTCCTTTTGAGAGTCTTGAACCAA CTGTTCTTGCAAAAAAAATCTCGTTACCAATCAAATTCAAATCAGACTCTATAAGCCAATTTCAATTACTACATTCTAAA TTCGGCAGACCAGGAGAACTTAACCCAGGCTTTAAGCCTGGAAAGATAAATTTCCTATTGCAATCAATTAGTGTTTATTA G
Upstream 100 bases:
>100_bases TGCACTTCAGAGATGAATTTCTTTATCTGGTGAAATCTACATTTTCGAACTCATGATTAATAAAAAAATTTTATAGAGTT AAAAAAAACCGCTGATAAAA
Downstream 100 bases:
>100_bases AATTATCAGGAACGCATTCAAACTTATATATTTCTGATTTCTAAGTTAATACAGGACAACTTACGTAATAAAAATTATTT CTCAAGAAAAGGAACAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MPELEKVVSSNDFDDWFSLNDTIMGGSSKAVCRASSKGLSLEGVVVEEKGGFVSCKSPIFSPLLNLSSYQGFELKIEGKG RTLKFGVSCKYGILGLKEFFLNKSPGGLRWVAEIDTKRFGTTTIKVPFESLEPTVLAKKISLPIKFKSDSISQFQLLHSK FGRPGELNPGFKPGKINFLLQSISVY
Sequences:
>Translated_186_residues MPELEKVVSSNDFDDWFSLNDTIMGGSSKAVCRASSKGLSLEGVVVEEKGGFVSCKSPIFSPLLNLSSYQGFELKIEGKG RTLKFGVSCKYGILGLKEFFLNKSPGGLRWVAEIDTKRFGTTTIKVPFESLEPTVLAKKISLPIKFKSDSISQFQLLHSK FGRPGELNPGFKPGKINFLLQSISVY >Mature_185_residues PELEKVVSSNDFDDWFSLNDTIMGGSSKAVCRASSKGLSLEGVVVEEKGGFVSCKSPIFSPLLNLSSYQGFELKIEGKGR TLKFGVSCKYGILGLKEFFLNKSPGGLRWVAEIDTKRFGTTTIKVPFESLEPTVLAKKISLPIKFKSDSISQFQLLHSKF GRPGELNPGFKPGKINFLLQSISVY
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20439; Mature: 20308
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELEKVVSSNDFDDWFSLNDTIMGGSSKAVCRASSKGLSLEGVVVEEKGGFVSCKSPIF CCHHHHHHCCCCCCHHCCCCCEEECCCCCEEEEECCCCCEEEEEEEECCCCEEEECCHHH SPLLNLSSYQGFELKIEGKGRTLKFGVSCKYGILGLKEFFLNKSPGGLRWVAEIDTKRFG HHHHCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCC TTTIKVPFESLEPTVLAKKISLPIKFKSDSISQFQLLHSKFGRPGELNPGFKPGKINFLL CEEEEEEHHHCCCEEEEHEECCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHEEEE QSISVY EEECCC >Mature Secondary Structure PELEKVVSSNDFDDWFSLNDTIMGGSSKAVCRASSKGLSLEGVVVEEKGGFVSCKSPIF CHHHHHHCCCCCCHHCCCCCEEECCCCCEEEEECCCCCEEEEEEEECCCCEEEECCHHH SPLLNLSSYQGFELKIEGKGRTLKFGVSCKYGILGLKEFFLNKSPGGLRWVAEIDTKRFG HHHHCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCC TTTIKVPFESLEPTVLAKKISLPIKFKSDSISQFQLLHSKFGRPGELNPGFKPGKINFLL CEEEEEEHHHCCCEEEEHEECCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHEEEE QSISVY EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA