| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025896
Identifier: 124025896
GI number: 124025896
Start: 1047690
End: 1048208
Strand: Reverse
Name: 124025896
Synonym: NATL1_11891
Alternate gene names: NA
Gene position: 1048208-1047690 (Counterclockwise)
Preceding gene: 124025897
Following gene: 124025892
Centisome position: 56.21
GC content: 43.16
Gene sequence:
>519_bases ATGTCTCAGTTATCCATCAAAGTTAGTGCTAAAGGTGATGCCTTGATCGCTACCTTGCAAAAGGAGATCTTTAACAGACG TCGTAAAAAGGTCACTGCTTCTCAAGTCGTTGAAACCCTTGTTGAAAGCGGAGCAAAATCTCAGTCTGATAAACGATACG CGGCTTCTTGGAAAAACCTAATTAAAGATATCGAAAAAGCAGCAAAAGTTTCTGAGGTTCATGGAAATAAGCCAGCAAAT ATTAGTGCTGATGAATGGGCTTTAATTCTTTCTCATCGGACACGTAAAGGAGCTGCTCCAAAAGCTACTGCAGCAAAAAA ATCAGTTGCTAAAAAGGCAACAGCAAAGAAGGCAGTTGCTAAAAAGGCTACAGCAAAGAAGTCAGTAGCTAAAAAGCCTG TAGCCAAAAAGGCTGCAGCCAAAGCTAAAGTCGAGGTTTCTGCGGTCGTCAAGCCAAGTGCTGGTAGGCCTGCTAGGCGT GCACGCAAAGCCAGAAAAGCACCTGAAGCTGCTAAATAA
Upstream 100 bases:
>100_bases ATTTGTTAGATATATGAAACATTAGTAGTCGATTAACCATTGACTATTGAATTTAATACCCTATATGTGATAGATGTATT AAGAAAGTAATTATTGAGTT
Downstream 100 bases:
>100_bases AACCTCACCAGACCGTCTAGGCGGCATGAGAGGTTCAATGCCTCTCACTGGCTTTTCATAGTTATTTTGAAAATATCTGT CCTAATTTGTCTTTTAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSQLSIKVSAKGDALIATLQKEIFNRRRKKVTASQVVETLVESGAKSQSDKRYAASWKNLIKDIEKAAKVSEVHGNKPAN ISADEWALILSHRTRKGAAPKATAAKKSVAKKATAKKAVAKKATAKKSVAKKPVAKKAAAKAKVEVSAVVKPSAGRPARR ARKARKAPEAAK
Sequences:
>Translated_172_residues MSQLSIKVSAKGDALIATLQKEIFNRRRKKVTASQVVETLVESGAKSQSDKRYAASWKNLIKDIEKAAKVSEVHGNKPAN ISADEWALILSHRTRKGAAPKATAAKKSVAKKATAKKAVAKKATAKKSVAKKPVAKKAAAKAKVEVSAVVKPSAGRPARR ARKARKAPEAAK >Mature_171_residues SQLSIKVSAKGDALIATLQKEIFNRRRKKVTASQVVETLVESGAKSQSDKRYAASWKNLIKDIEKAAKVSEVHGNKPANI SADEWALILSHRTRKGAAPKATAAKKSVAKKATAKKAVAKKATAKKSVAKKPVAKKAAAKAKVEVSAVVKPSAGRPARRA RKARKAPEAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18299; Mature: 18167
Theoretical pI: Translated: 11.64; Mature: 11.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLSIKVSAKGDALIATLQKEIFNRRRKKVTASQVVETLVESGAKSQSDKRYAASWKNL CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IKDIEKAAKVSEVHGNKPANISADEWALILSHRTRKGAAPKATAAKKSVAKKATAKKAVA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH KKATAKKSVAKKPVAKKAAAKAKVEVSAVVKPSAGRPARRARKARKAPEAAK HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure SQLSIKVSAKGDALIATLQKEIFNRRRKKVTASQVVETLVESGAKSQSDKRYAASWKNL CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IKDIEKAAKVSEVHGNKPANISADEWALILSHRTRKGAAPKATAAKKSVAKKATAKKAVA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH KKATAKKSVAKKPVAKKAAAKAKVEVSAVVKPSAGRPARRARKARKAPEAAK HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA