| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025884
Identifier: 124025884
GI number: 124025884
Start: 1043077
End: 1043925
Strand: Direct
Name: 124025884
Synonym: NATL1_11771
Alternate gene names: NA
Gene position: 1043077-1043925 (Clockwise)
Preceding gene: 124025883
Following gene: 124025885
Centisome position: 55.94
GC content: 37.34
Gene sequence:
>849_bases ATGAGTTCACAAAATAGGAGTGACGATCTAGATCTGGTCAGCAAAAACCTTGAATTAATTATTAGTTCGAGTAACTACCA ATTAGCCCATGAAGATAGAAAGTTACTCAATAGTGATGAAATGAGAGGCGTGCGAATGCTTCTAGAAATAAATAAACCAG AAAAAATCTTGGAAGAGCAGAATATTTTATCAACAATCATCGTCTTTGGAGGGGCAAGTTTATCTGATAAAAGCTCTATA GATCGCAGAATTGAACTAGTTAAGAACTCTCTCACGAAAGATCCAAGCTCATCAAATTTAGATAGAGAATTAACACGACT AAAGAATTTACAGTCAATCTCTCATTACTACGACTCTGCTAGAGAATTCGCGAAGATTGTCTCCAGACAAAACCAAAAAG AGCATTGCAATTCACATGTAATTGTCACTGGTGGTGGTCCAGGGATTATGGAGGCTGCCAATCGAGGTGCTTTTGATGCG GACTGTAAATCAATAGGATTAAACATAAGTCTCCCAAACGAGCAACATCCAAATGCATATATCACTCCTGGACTTTGCTT CAAATTTAATTATTTCGCCTTACGAAAATTTCATTTTGTGATGCGATCAGTTGCAGCTGTCTTTTTCCCTGGGGGATTTG GAACATTTGATGAACTCTTCGAATTACTCACTCTTCGTCAAACAGGAATGAAAACAGAAATTCCAATTATTCTTTTTGGT CGAGATTATTGGTCGAAAGTGATCAACTTTCAATTCCTTTCAGATCACGGACTTATCTCAGATGAACACATGAAACTCTT TCAATACGCCGATAGTGCTTCAGAAGCATGGGACATAATCAAACAATAG
Upstream 100 bases:
>100_bases AATGTAGATAGTGGCATCAAACACCTCACTATTCATTTCATATAAATGTATGAATTGATCAAATAATTAATAGCATTAAA ACTTTAGGAGGCATATTCAA
Downstream 100 bases:
>100_bases TCCTATCATCGGGAAATGGATTGGAAGACATCACTAGATTGGTATTGCTCAGGTAACATTCTTGAAAAAGAAGATGTCGA CCTTTTAGAGGAACACTATC
Product: Rossmann fold nucleotide-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSSQNRSDDLDLVSKNLELIISSSNYQLAHEDRKLLNSDEMRGVRMLLEINKPEKILEEQNILSTIIVFGGASLSDKSSI DRRIELVKNSLTKDPSSSNLDRELTRLKNLQSISHYYDSAREFAKIVSRQNQKEHCNSHVIVTGGGPGIMEAANRGAFDA DCKSIGLNISLPNEQHPNAYITPGLCFKFNYFALRKFHFVMRSVAAVFFPGGFGTFDELFELLTLRQTGMKTEIPIILFG RDYWSKVINFQFLSDHGLISDEHMKLFQYADSASEAWDIIKQ
Sequences:
>Translated_282_residues MSSQNRSDDLDLVSKNLELIISSSNYQLAHEDRKLLNSDEMRGVRMLLEINKPEKILEEQNILSTIIVFGGASLSDKSSI DRRIELVKNSLTKDPSSSNLDRELTRLKNLQSISHYYDSAREFAKIVSRQNQKEHCNSHVIVTGGGPGIMEAANRGAFDA DCKSIGLNISLPNEQHPNAYITPGLCFKFNYFALRKFHFVMRSVAAVFFPGGFGTFDELFELLTLRQTGMKTEIPIILFG RDYWSKVINFQFLSDHGLISDEHMKLFQYADSASEAWDIIKQ >Mature_281_residues SSQNRSDDLDLVSKNLELIISSSNYQLAHEDRKLLNSDEMRGVRMLLEINKPEKILEEQNILSTIIVFGGASLSDKSSID RRIELVKNSLTKDPSSSNLDRELTRLKNLQSISHYYDSAREFAKIVSRQNQKEHCNSHVIVTGGGPGIMEAANRGAFDAD CKSIGLNISLPNEQHPNAYITPGLCFKFNYFALRKFHFVMRSVAAVFFPGGFGTFDELFELLTLRQTGMKTEIPIILFGR DYWSKVINFQFLSDHGLISDEHMKLFQYADSASEAWDIIKQ
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31993; Mature: 31862
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQNRSDDLDLVSKNLELIISSSNYQLAHEDRKLLNSDEMRGVRMLLEINKPEKILEEQ CCCCCCCCCHHHHHCCEEEEEECCCCEEHHHHHHHHCCHHHHHEEEEEECCCCHHHHHHH NILSTIIVFGGASLSDKSSIDRRIELVKNSLTKDPSSSNLDRELTRLKNLQSISHYYDSA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH REFAKIVSRQNQKEHCNSHVIVTGGGPGIMEAANRGAFDADCKSIGLNISLPNEQHPNAY HHHHHHHHCCCCHHHCCCEEEEECCCCCHHHHHCCCCCCCCHHHCCCEEECCCCCCCCEE ITPGLCFKFNYFALRKFHFVMRSVAAVFFPGGFGTFDELFELLTLRQTGMKTEIPIILFG ECCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEC RDYWSKVINFQFLSDHGLISDEHMKLFQYADSASEAWDIIKQ CHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure SSQNRSDDLDLVSKNLELIISSSNYQLAHEDRKLLNSDEMRGVRMLLEINKPEKILEEQ CCCCCCCCHHHHHCCEEEEEECCCCEEHHHHHHHHCCHHHHHEEEEEECCCCHHHHHHH NILSTIIVFGGASLSDKSSIDRRIELVKNSLTKDPSSSNLDRELTRLKNLQSISHYYDSA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH REFAKIVSRQNQKEHCNSHVIVTGGGPGIMEAANRGAFDADCKSIGLNISLPNEQHPNAY HHHHHHHHCCCCHHHCCCEEEEECCCCCHHHHHCCCCCCCCHHHCCCEEECCCCCCCCEE ITPGLCFKFNYFALRKFHFVMRSVAAVFFPGGFGTFDELFELLTLRQTGMKTEIPIILFG ECCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEC RDYWSKVINFQFLSDHGLISDEHMKLFQYADSASEAWDIIKQ CHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA