| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025882
Identifier: 124025882
GI number: 124025882
Start: 1042144
End: 1042554
Strand: Direct
Name: 124025882
Synonym: NATL1_11751
Alternate gene names: NA
Gene position: 1042144-1042554 (Clockwise)
Preceding gene: 124025881
Following gene: 124025883
Centisome position: 55.89
GC content: 33.58
Gene sequence:
>411_bases ATGGCAGCAATAAAAAAAGACTCAGAGCCTCTAGATAACTTATCCAGTCAAGAGATAGAGGATATTGTCAGATCAAACGA AATTTTGGATCAAGAAAATGAAAGACTAATCAAAGAAGAAGAAATAGAGGCACAAAGATTCTCAAAGACAAAATCTACAA AAAGATTGCTTAGACGATTAAGAAGATCTCCACTTGAAGTGATAAATCGATCACTCTTTTTTGTATTCATTGGTAGTTTT ATCTTCTCCTTTGTCTCTGTGTACTCAATCAACAAGTTGTGGTTTGTTTTTTATGTCATCAGTGCCTTCTCATGTGTTTT ATACACTCCAAATAGACAAGCCCTCAAGGAACTAATTGCAGCATGGCCAAATATCGAAGATCTTTTAAAAAAAAGAAGTC TATGGAAATAA
Upstream 100 bases:
>100_bases TTTCCTTTTCCACCTGGCCTAGGCAATTAATCAAAACGCAAACATTCGCTTTAGTAAGGTAGATACAGATAACTATCTAA CTTTTAAGTTTGTTGAACTA
Downstream 100 bases:
>100_bases ATTATTTAGACTTATAGACCATTGAAGTGAAAATTATTTACTGAGGTAAGTCTCAACTATTCTAAATTCAAAATTGATTA AAAGGTAATGGATAAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MAAIKKDSEPLDNLSSQEIEDIVRSNEILDQENERLIKEEEIEAQRFSKTKSTKRLLRRLRRSPLEVINRSLFFVFIGSF IFSFVSVYSINKLWFVFYVISAFSCVLYTPNRQALKELIAAWPNIEDLLKKRSLWK
Sequences:
>Translated_136_residues MAAIKKDSEPLDNLSSQEIEDIVRSNEILDQENERLIKEEEIEAQRFSKTKSTKRLLRRLRRSPLEVINRSLFFVFIGSF IFSFVSVYSINKLWFVFYVISAFSCVLYTPNRQALKELIAAWPNIEDLLKKRSLWK >Mature_135_residues AAIKKDSEPLDNLSSQEIEDIVRSNEILDQENERLIKEEEIEAQRFSKTKSTKRLLRRLRRSPLEVINRSLFFVFIGSFI FSFVSVYSINKLWFVFYVISAFSCVLYTPNRQALKELIAAWPNIEDLLKKRSLWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16093; Mature: 15962
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAIKKDSEPLDNLSSQEIEDIVRSNEILDQENERLIKEEEIEAQRFSKTKSTKRLLRRL CCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRSPLEVINRSLFFVFIGSFIFSFVSVYSINKLWFVFYVISAFSCVLYTPNRQALKELIA HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AWPNIEDLLKKRSLWK HCCCHHHHHHHHCCCC >Mature Secondary Structure AAIKKDSEPLDNLSSQEIEDIVRSNEILDQENERLIKEEEIEAQRFSKTKSTKRLLRRL CCCCCCCCCHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRSPLEVINRSLFFVFIGSFIFSFVSVYSINKLWFVFYVISAFSCVLYTPNRQALKELIA HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AWPNIEDLLKKRSLWK HCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA