Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124025882

Identifier: 124025882

GI number: 124025882

Start: 1042144

End: 1042554

Strand: Direct

Name: 124025882

Synonym: NATL1_11751

Alternate gene names: NA

Gene position: 1042144-1042554 (Clockwise)

Preceding gene: 124025881

Following gene: 124025883

Centisome position: 55.89

GC content: 33.58

Gene sequence:

>411_bases
ATGGCAGCAATAAAAAAAGACTCAGAGCCTCTAGATAACTTATCCAGTCAAGAGATAGAGGATATTGTCAGATCAAACGA
AATTTTGGATCAAGAAAATGAAAGACTAATCAAAGAAGAAGAAATAGAGGCACAAAGATTCTCAAAGACAAAATCTACAA
AAAGATTGCTTAGACGATTAAGAAGATCTCCACTTGAAGTGATAAATCGATCACTCTTTTTTGTATTCATTGGTAGTTTT
ATCTTCTCCTTTGTCTCTGTGTACTCAATCAACAAGTTGTGGTTTGTTTTTTATGTCATCAGTGCCTTCTCATGTGTTTT
ATACACTCCAAATAGACAAGCCCTCAAGGAACTAATTGCAGCATGGCCAAATATCGAAGATCTTTTAAAAAAAAGAAGTC
TATGGAAATAA

Upstream 100 bases:

>100_bases
TTTCCTTTTCCACCTGGCCTAGGCAATTAATCAAAACGCAAACATTCGCTTTAGTAAGGTAGATACAGATAACTATCTAA
CTTTTAAGTTTGTTGAACTA

Downstream 100 bases:

>100_bases
ATTATTTAGACTTATAGACCATTGAAGTGAAAATTATTTACTGAGGTAAGTCTCAACTATTCTAAATTCAAAATTGATTA
AAAGGTAATGGATAAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MAAIKKDSEPLDNLSSQEIEDIVRSNEILDQENERLIKEEEIEAQRFSKTKSTKRLLRRLRRSPLEVINRSLFFVFIGSF
IFSFVSVYSINKLWFVFYVISAFSCVLYTPNRQALKELIAAWPNIEDLLKKRSLWK

Sequences:

>Translated_136_residues
MAAIKKDSEPLDNLSSQEIEDIVRSNEILDQENERLIKEEEIEAQRFSKTKSTKRLLRRLRRSPLEVINRSLFFVFIGSF
IFSFVSVYSINKLWFVFYVISAFSCVLYTPNRQALKELIAAWPNIEDLLKKRSLWK
>Mature_135_residues
AAIKKDSEPLDNLSSQEIEDIVRSNEILDQENERLIKEEEIEAQRFSKTKSTKRLLRRLRRSPLEVINRSLFFVFIGSFI
FSFVSVYSINKLWFVFYVISAFSCVLYTPNRQALKELIAAWPNIEDLLKKRSLWK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16093; Mature: 15962

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAIKKDSEPLDNLSSQEIEDIVRSNEILDQENERLIKEEEIEAQRFSKTKSTKRLLRRL
CCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRSPLEVINRSLFFVFIGSFIFSFVSVYSINKLWFVFYVISAFSCVLYTPNRQALKELIA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AWPNIEDLLKKRSLWK
HCCCHHHHHHHHCCCC
>Mature Secondary Structure 
AAIKKDSEPLDNLSSQEIEDIVRSNEILDQENERLIKEEEIEAQRFSKTKSTKRLLRRL
CCCCCCCCCHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRSPLEVINRSLFFVFIGSFIFSFVSVYSINKLWFVFYVISAFSCVLYTPNRQALKELIA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AWPNIEDLLKKRSLWK
HCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA