| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is pstS [H]
Identifier: 124025859
GI number: 124025859
Start: 1029659
End: 1030630
Strand: Direct
Name: pstS [H]
Synonym: NATL1_11521
Alternate gene names: 124025859
Gene position: 1029659-1030630 (Clockwise)
Preceding gene: 124025855
Following gene: 124025860
Centisome position: 55.22
GC content: 42.7
Gene sequence:
>972_bases ATGACCTTCGCCAAGAAGGCCCTCATCTTTACTTCTTTGCTTGCAGTGGGCGCAGGCATGTCCGCAACTGCAGCTAGTCG TCTTAGTGGAGCAGGTGCATCCTTCCCCGCTAAAATCTACACTCGTTGGTTTTCCGATTTAGCAAAAGAGGGTGGTCCTC GTGTTAACTACCAAGCTGTTGGTTCAGGTTCTGGCCGTAAAGCATTCATTGATCAAACCGTAAACTTCGGTGCTTCTGAT GATCCAATGAAAGCAAAGGATATTGCAAAAGTTACTCGTGGATTAGTTCAAATCCCAATGGTTGGAGGCACAATTGCCTT TGGTTACAACTACGATTGCGACCTTAAACTTACTCAAGAGCAAGCTGTTCGCGTTGCTATGGGTAAAATCTCAAATTGGA AAGAAGTTGGTTGTCCAGCAGGAAAAATGACATGGGCACATCGCTCTGATGGCTCCGGTACAACCAAGGCTTTTTCAAAC TCTATGCAAGCTTTCTCTAAGACATGGAATTTAGGAACAGGTAAATCTATTGCTTGGCCTGCTGGTGTTGGTGGAAAAGG TAACGCTGGTGTTGCAGGCGTAATTCGTAATACTCCTGGTGCAATTGGTTATGTAAACCAGTCATATATTAAAGGAGAAA TCAAGGCTGCCGCTCTTCAAAACTTATCTGGAGAGTATTTAAAGCCATCTACTGAGTCAGGAGCTAAAGCTCTTAATGGA ATTAAGTTAGATGAAAATTTAGCAGGTAAAAACCCCAACCCAAAAGCTAAGGGTGCATACCCAATCGCTACGTTGACATG GATTCTTGCTTATGAAGAAGGCAATGGTAGAAATACTAAAGCCATTCAAAAATCACTTAACTACTTGCTAAGTGATAAAG CTCAGGCTAAGGCTCCTTCTCTTGGATTCGTACCTCTTAAAGGTGAAATTCTTAAAAAATCACGTGCTGCCGTAAAGCGT ATTGGTAAATAA
Upstream 100 bases:
>100_bases CACCAAGGAAAATTGATGAATTGCTAATTTGAATTTGAAATAAAAATAATTAGATCAATTAAATGCTATGAAATAAGAGC CAGTTTTTTTATTAGGCCTC
Downstream 100 bases:
>100_bases ATTATACTCATGATCTTAAAAAGGAGGCATTAGCCTCCTTTTTTTATTGTCTATTTTTTGCTTGCTAGTAACTTCTTAAC TTAAGCTTAAAAAATGCTCT
Product: ABC transporter, substrate binding protein, phosphate
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTFAKKALIFTSLLAVGAGMSATAASRLSGAGASFPAKIYTRWFSDLAKEGGPRVNYQAVGSGSGRKAFIDQTVNFGASD DPMKAKDIAKVTRGLVQIPMVGGTIAFGYNYDCDLKLTQEQAVRVAMGKISNWKEVGCPAGKMTWAHRSDGSGTTKAFSN SMQAFSKTWNLGTGKSIAWPAGVGGKGNAGVAGVIRNTPGAIGYVNQSYIKGEIKAAALQNLSGEYLKPSTESGAKALNG IKLDENLAGKNPNPKAKGAYPIATLTWILAYEEGNGRNTKAIQKSLNYLLSDKAQAKAPSLGFVPLKGEILKKSRAAVKR IGK
Sequences:
>Translated_323_residues MTFAKKALIFTSLLAVGAGMSATAASRLSGAGASFPAKIYTRWFSDLAKEGGPRVNYQAVGSGSGRKAFIDQTVNFGASD DPMKAKDIAKVTRGLVQIPMVGGTIAFGYNYDCDLKLTQEQAVRVAMGKISNWKEVGCPAGKMTWAHRSDGSGTTKAFSN SMQAFSKTWNLGTGKSIAWPAGVGGKGNAGVAGVIRNTPGAIGYVNQSYIKGEIKAAALQNLSGEYLKPSTESGAKALNG IKLDENLAGKNPNPKAKGAYPIATLTWILAYEEGNGRNTKAIQKSLNYLLSDKAQAKAPSLGFVPLKGEILKKSRAAVKR IGK >Mature_322_residues TFAKKALIFTSLLAVGAGMSATAASRLSGAGASFPAKIYTRWFSDLAKEGGPRVNYQAVGSGSGRKAFIDQTVNFGASDD PMKAKDIAKVTRGLVQIPMVGGTIAFGYNYDCDLKLTQEQAVRVAMGKISNWKEVGCPAGKMTWAHRSDGSGTTKAFSNS MQAFSKTWNLGTGKSIAWPAGVGGKGNAGVAGVIRNTPGAIGYVNQSYIKGEIKAAALQNLSGEYLKPSTESGAKALNGI KLDENLAGKNPNPKAKGAYPIATLTWILAYEEGNGRNTKAIQKSLNYLLSDKAQAKAPSLGFVPLKGEILKKSRAAVKRI GK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=319, Percent_Identity=32.2884012539185, Blast_Score=159, Evalue=2e-40,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 33919; Mature: 33788
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFAKKALIFTSLLAVGAGMSATAASRLSGAGASFPAKIYTRWFSDLAKEGGPRVNYQAV CCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE GSGSGRKAFIDQTVNFGASDDPMKAKDIAKVTRGLVQIPMVGGTIAFGYNYDCDLKLTQE CCCCCCEEEHHHHHCCCCCCCCCCHHHHHHHHHHHEEECEECCEEEECCCCCCCEEECHH QAVRVAMGKISNWKEVGCPAGKMTWAHRSDGSGTTKAFSNSMQAFSKTWNLGTGKSIAWP HHHHHHHHCCCCCHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC AGVGGKGNAGVAGVIRNTPGAIGYVNQSYIKGEIKAAALQNLSGEYLKPSTESGAKALNG CCCCCCCCCCEEEEEECCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC IKLDENLAGKNPNPKAKGAYPIATLTWILAYEEGNGRNTKAIQKSLNYLLSDKAQAKAPS CEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHCCCC LGFVPLKGEILKKSRAAVKRIGK CCEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TFAKKALIFTSLLAVGAGMSATAASRLSGAGASFPAKIYTRWFSDLAKEGGPRVNYQAV CCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE GSGSGRKAFIDQTVNFGASDDPMKAKDIAKVTRGLVQIPMVGGTIAFGYNYDCDLKLTQE CCCCCCEEEHHHHHCCCCCCCCCCHHHHHHHHHHHEEECEECCEEEECCCCCCCEEECHH QAVRVAMGKISNWKEVGCPAGKMTWAHRSDGSGTTKAFSNSMQAFSKTWNLGTGKSIAWP HHHHHHHHCCCCCHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC AGVGGKGNAGVAGVIRNTPGAIGYVNQSYIKGEIKAAALQNLSGEYLKPSTESGAKALNG CCCCCCCCCCEEEEEECCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC IKLDENLAGKNPNPKAKGAYPIATLTWILAYEEGNGRNTKAIQKSLNYLLSDKAQAKAPS CEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHCCCC LGFVPLKGEILKKSRAAVKRIGK CCEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]