| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is kch [C]
Identifier: 124025801
GI number: 124025801
Start: 999598
End: 1000638
Strand: Direct
Name: kch [C]
Synonym: NATL1_10941
Alternate gene names: 124025801
Gene position: 999598-1000638 (Clockwise)
Preceding gene: 124025799
Following gene: 124025802
Centisome position: 53.61
GC content: 35.25
Gene sequence:
>1041_bases TTGAATCTGATAAAAACAAATAAATTTAGAGGCTATTTAAAAGTTTGGGCAGCGCCAATATCTTTACTCATATTCTTATT TTTATTCGGTGCTTTAGGCTATCGATTTACAGAAGGTTGGGATTGGGGAGACTGTTTATGGATGGTACTGATAACCATTA CAACAATAGGCTTTGGTGAAGTTGAAGTTTTGAGTTCGGCTGGGCGGGTTATAACTTTTTTAATCATCGGAGGGGGATTA TTTGTAGTTCAATTAACTCTTCAAAGATTTATACAATTATCTGAACTAGGATATTTCATAAAATTAGAGGAACTCCGATT AAGGAGATTAATTAGAAGAATGAAAAATCATGTAATTATATGTGGATATGGTCGTACAGGTAAAGAAATTGCTGACCAAT TATATTCTGAAAAAATATCTACACTAATAATAGAAAACGACCCTACAAGAAAAACCGAAGCTGAGGAAAAAGGATTTAAC GTCTTATTAGCAGATGCAACAATGGACGAAACATTATTACTAGCAGGAGTAAGAAATTGTCGTAGCTTAGTGGTTACTCT TCCAAATGATGCAGCGAATTTATATGTTGTTCTTAGTGCAAAAGCTCTAAATAATAGTTGCAGATTGATCGCTAGGGCAG CGAACGAGGAAGCTGCTAGTAAATTAAAACTTGCAGGAGCTGATGCGGTAGTCAGTCCATATGTTGCGGCAGGGAGAACA ATGGCAGCCTCTGCATTAAGACCTATAGCTGTGGACTTTATAGATTTACTTGCAGGTTCAGATTGCGAAATAGAAGAATT TAAGCTTACTGAACATGTTGAAACAATTGAGACTTTCAGAAGTCAACATGAATATGTTTTTGAAATTTCAAAACGAGGCG AAGCACTACTTTTAGCAACTAAAGTCTCGGGTCAATTAATAGGTAATCCTAAAAACAAGGTATCTATCTCTCCAGGCATG ATTTTGATATTCCTTGGAAGTCAAGAGCAATTAAACAGGATTAGAGTTCACCTTAAAGAAGTTTTAGTAAAAACAACATA G
Upstream 100 bases:
>100_bases GATTATATAATAGGCTAGATTTATACCTATAGAAATAAAAACGAAAAAATATTTAATTCAATTTTCACTATACTATAAAA ATTAAGACTAAAGAATTAAA
Downstream 100 bases:
>100_bases TTAATCTTTGAAAACAATCCAGCGAGGGTTAACACTACAAGAAACACTTAACACCTTAAAAAAAAAATGATTAGAACAAA AGTGATTTAATTTTACGCGG
Product: hypothetical protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: MjK1 [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MNLIKTNKFRGYLKVWAAPISLLIFLFLFGALGYRFTEGWDWGDCLWMVLITITTIGFGEVEVLSSAGRVITFLIIGGGL FVVQLTLQRFIQLSELGYFIKLEELRLRRLIRRMKNHVIICGYGRTGKEIADQLYSEKISTLIIENDPTRKTEAEEKGFN VLLADATMDETLLLAGVRNCRSLVVTLPNDAANLYVVLSAKALNNSCRLIARAANEEAASKLKLAGADAVVSPYVAAGRT MAASALRPIAVDFIDLLAGSDCEIEEFKLTEHVETIETFRSQHEYVFEISKRGEALLLATKVSGQLIGNPKNKVSISPGM ILIFLGSQEQLNRIRVHLKEVLVKTT
Sequences:
>Translated_346_residues MNLIKTNKFRGYLKVWAAPISLLIFLFLFGALGYRFTEGWDWGDCLWMVLITITTIGFGEVEVLSSAGRVITFLIIGGGL FVVQLTLQRFIQLSELGYFIKLEELRLRRLIRRMKNHVIICGYGRTGKEIADQLYSEKISTLIIENDPTRKTEAEEKGFN VLLADATMDETLLLAGVRNCRSLVVTLPNDAANLYVVLSAKALNNSCRLIARAANEEAASKLKLAGADAVVSPYVAAGRT MAASALRPIAVDFIDLLAGSDCEIEEFKLTEHVETIETFRSQHEYVFEISKRGEALLLATKVSGQLIGNPKNKVSISPGM ILIFLGSQEQLNRIRVHLKEVLVKTT >Mature_346_residues MNLIKTNKFRGYLKVWAAPISLLIFLFLFGALGYRFTEGWDWGDCLWMVLITITTIGFGEVEVLSSAGRVITFLIIGGGL FVVQLTLQRFIQLSELGYFIKLEELRLRRLIRRMKNHVIICGYGRTGKEIADQLYSEKISTLIIENDPTRKTEAEEKGFN VLLADATMDETLLLAGVRNCRSLVVTLPNDAANLYVVLSAKALNNSCRLIARAANEEAASKLKLAGADAVVSPYVAAGRT MAASALRPIAVDFIDLLAGSDCEIEEFKLTEHVETIETFRSQHEYVFEISKRGEALLLATKVSGQLIGNPKNKVSISPGM ILIFLGSQEQLNRIRVHLKEVLVKTT
Specific function: Potassium channel protein. Seems to conduct potassium at low membrane potentials [H]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787503, Length=229, Percent_Identity=24.4541484716157, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786685, Length=126, Percent_Identity=32.5396825396825, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013099 - InterPro: IPR003280 - InterPro: IPR016040 - InterPro: IPR006037 - InterPro: IPR003148 [H]
Pfam domain/function: PF07885 Ion_trans_2; PF02080 TrkA_C; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 38444; Mature: 38444
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLIKTNKFRGYLKVWAAPISLLIFLFLFGALGYRFTEGWDWGDCLWMVLITITTIGFGE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHCCCCH VEVLSSAGRVITFLIIGGGLFVVQLTLQRFIQLSELGYFIKLEELRLRRLIRRMKNHVII HHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCEEE CGYGRTGKEIADQLYSEKISTLIIENDPTRKTEAEEKGFNVLLADATMDETLLLAGVRNC EECCCCCHHHHHHHHHHHHHEEEECCCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHHCC RSLVVTLPNDAANLYVVLSAKALNNSCRLIARAANEEAASKLKLAGADAVVSPYVAAGRT CEEEEECCCCCCEEEEEEEEHHCCCCHHEEEECCCHHHHHHEEECCCCHHHCCHHHCCCH MAASALRPIAVDFIDLLAGSDCEIEEFKLTEHVETIETFRSQHEYVFEISKRGEALLLAT HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEE KVSGQLIGNPKNKVSISPGMILIFLGSQEQLNRIRVHLKEVLVKTT ECCCEEECCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNLIKTNKFRGYLKVWAAPISLLIFLFLFGALGYRFTEGWDWGDCLWMVLITITTIGFGE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHCCCCH VEVLSSAGRVITFLIIGGGLFVVQLTLQRFIQLSELGYFIKLEELRLRRLIRRMKNHVII HHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCEEE CGYGRTGKEIADQLYSEKISTLIIENDPTRKTEAEEKGFNVLLADATMDETLLLAGVRNC EECCCCCHHHHHHHHHHHHHEEEECCCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHHCC RSLVVTLPNDAANLYVVLSAKALNNSCRLIARAANEEAASKLKLAGADAVVSPYVAAGRT CEEEEECCCCCCEEEEEEEEHHCCCCHHEEEECCCHHHHHHEEECCCCHHHCCHHHCCCH MAASALRPIAVDFIDLLAGSDCEIEEFKLTEHVETIETFRSQHEYVFEISKRGEALLLAT HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEE KVSGQLIGNPKNKVSISPGMILIFLGSQEQLNRIRVHLKEVLVKTT ECCCEEECCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]