| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025682
Identifier: 124025682
GI number: 124025682
Start: 895158
End: 895466
Strand: Reverse
Name: 124025682
Synonym: NATL1_09751
Alternate gene names: NA
Gene position: 895466-895158 (Counterclockwise)
Preceding gene: 124025683
Following gene: 124025681
Centisome position: 48.02
GC content: 35.92
Gene sequence:
>309_bases ATGCATGAACTATCTTTAGGAACATGGTTTATCCATATTGCGACTCTATTTGAGTGGGCAATTGCAATAATAATAATTGA CTATATTTCATCAATAACCAATAACAAGGCTTTGGGTTATTTTGCATTAGCAATGTTGCCAAATTTAGCTAGTGCTATGG CAGCAATCACATGGCATATATTCGACAACAGTATTGAATTAAAAGGATTAGTTGTACTACAGGCGGCTCTTACAACTGTA GGAAATATATGTCTTGCACTTGCTGCTTGGAACTTGTTTAGGTCTGAGTCATCACAATCGAACCAATGA
Upstream 100 bases:
>100_bases ATCAACCCAGAAGGTATAGTTGTATATAAATGGATAGGAGTAAGACCAATTGGACATGCTCAAGAAGTTTTAAAAGAGCT TACTAAACAACAAAAAATAT
Downstream 100 bases:
>100_bases ATATTTCAATTCTTAGTCTTGATTCAATAGCACGAATTGACCCAAGTCCATTTTTCGTCATTTCACTAATCCCTTATCTA GTATTTCTGCGTTACGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MHELSLGTWFIHIATLFEWAIAIIIIDYISSITNNKALGYFALAMLPNLASAMAAITWHIFDNSIELKGLVVLQAALTTV GNICLALAAWNLFRSESSQSNQ
Sequences:
>Translated_102_residues MHELSLGTWFIHIATLFEWAIAIIIIDYISSITNNKALGYFALAMLPNLASAMAAITWHIFDNSIELKGLVVLQAALTTV GNICLALAAWNLFRSESSQSNQ >Mature_102_residues MHELSLGTWFIHIATLFEWAIAIIIIDYISSITNNKALGYFALAMLPNLASAMAAITWHIFDNSIELKGLVVLQAALTTV GNICLALAAWNLFRSESSQSNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ycf49 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019634 [H]
Pfam domain/function: PF10693 DUF2499 [H]
EC number: NA
Molecular weight: Translated: 11210; Mature: 11210
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHELSLGTWFIHIATLFEWAIAIIIIDYISSITNNKALGYFALAMLPNLASAMAAITWHI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FDNSIELKGLVVLQAALTTVGNICLALAAWNLFRSESSQSNQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MHELSLGTWFIHIATLFEWAIAIIIIDYISSITNNKALGYFALAMLPNLASAMAAITWHI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FDNSIELKGLVVLQAALTTVGNICLALAAWNLFRSESSQSNQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]