| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025598
Identifier: 124025598
GI number: 124025598
Start: 827868
End: 828503
Strand: Reverse
Name: 124025598
Synonym: NATL1_08911
Alternate gene names: NA
Gene position: 828503-827868 (Counterclockwise)
Preceding gene: 124025602
Following gene: 124025597
Centisome position: 44.43
GC content: 40.41
Gene sequence:
>636_bases ATGAGCGAACTACAGCGCCTAAAAGGGCTGCTGCCACCAGAAAACCAAAGCTGGGTATTCATTGAAGCCGCAGCAGCAAT AGATCCACCTCTAATCACGCTTGAAGAAATCGGGCGCGATGAAGTGGAGATTCAAGTTGACCTTGAACAATGGGACTATT TAGCTCAAGATCATAGAAATCTATTGTTTTGGCATGAGGTGGGACGCATTCAAAATGACACCATCCCAAGAGATGGCTGG GAAATGGCTGCTCTTGCAATAGGTCTGGGTGGTGCTATTGGAGAATTATGGGTTCAAGATGGATTGCTACTTTTAATGGC ACTCGGATTGTCAGGTTTTGCAGGTTATAGGCTTTACTTAAAAAATAATTCAGAAAAACGATTACAAGATGCAATATCTG CTGATGAAAGAGCTATAGATTTAGCATGCAGATTTGGATATAGCGTTCCAAATGCTTATAAGAGTCTTGGCGGTGCTTTA AAAGATTTAGTTGAAAAATCTAGAAAGAAAAAAAAGCGCACATTCTATGAAGATAGATTAGAAGCTCTAAGAAAGAGTGC TGAAAGAGCTCGCGCAGAAATGGCATCTCAAGAAGGATCTCAAAAATCAGTTACTAGTGAAAATGTTTATGGATAG
Upstream 100 bases:
>100_bases ATTTATGTCACGCATTCTAGGTATCTGTTTATCATCTACTGTCTAGATCGGCAAACTACCATTAAAGTTTAACTAACTTT CCGAATAAGAAACAAAGAGT
Downstream 100 bases:
>100_bases TAATAGGTTAGTTGAACTAGCTGCAGTTGCTTGCGATGATAGAAAAGCTGGTGATATAAAACTTTTAAAAGTTGATAAAG TATCAAGTATTGCTGATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSELQRLKGLLPPENQSWVFIEAAAAIDPPLITLEEIGRDEVEIQVDLEQWDYLAQDHRNLLFWHEVGRIQNDTIPRDGW EMAALAIGLGGAIGELWVQDGLLLLMALGLSGFAGYRLYLKNNSEKRLQDAISADERAIDLACRFGYSVPNAYKSLGGAL KDLVEKSRKKKKRTFYEDRLEALRKSAERARAEMASQEGSQKSVTSENVYG
Sequences:
>Translated_211_residues MSELQRLKGLLPPENQSWVFIEAAAAIDPPLITLEEIGRDEVEIQVDLEQWDYLAQDHRNLLFWHEVGRIQNDTIPRDGW EMAALAIGLGGAIGELWVQDGLLLLMALGLSGFAGYRLYLKNNSEKRLQDAISADERAIDLACRFGYSVPNAYKSLGGAL KDLVEKSRKKKKRTFYEDRLEALRKSAERARAEMASQEGSQKSVTSENVYG >Mature_210_residues SELQRLKGLLPPENQSWVFIEAAAAIDPPLITLEEIGRDEVEIQVDLEQWDYLAQDHRNLLFWHEVGRIQNDTIPRDGWE MAALAIGLGGAIGELWVQDGLLLLMALGLSGFAGYRLYLKNNSEKRLQDAISADERAIDLACRFGYSVPNAYKSLGGALK DLVEKSRKKKKRTFYEDRLEALRKSAERARAEMASQEGSQKSVTSENVYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021751 [H]
Pfam domain/function: PF11780 DUF3318 [H]
EC number: NA
Molecular weight: Translated: 23727; Mature: 23596
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELQRLKGLLPPENQSWVFIEAAAAIDPPLITLEEIGRDEVEIQVDLEQWDYLAQDHRN CCHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEHHHCCCCCEEEEEEHHHHHHHHHHCCC LLFWHEVGRIQNDTIPRDGWEMAALAIGLGGAIGELWVQDGLLLLMALGLSGFAGYRLYL EEHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE KNNSEKRLQDAISADERAIDLACRFGYSVPNAYKSLGGALKDLVEKSRKKKKRTFYEDRL ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALRKSAERARAEMASQEGSQKSVTSENVYG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SELQRLKGLLPPENQSWVFIEAAAAIDPPLITLEEIGRDEVEIQVDLEQWDYLAQDHRN CHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEHHHCCCCCEEEEEEHHHHHHHHHHCCC LLFWHEVGRIQNDTIPRDGWEMAALAIGLGGAIGELWVQDGLLLLMALGLSGFAGYRLYL EEHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE KNNSEKRLQDAISADERAIDLACRFGYSVPNAYKSLGGALKDLVEKSRKKKKRTFYEDRL ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALRKSAERARAEMASQEGSQKSVTSENVYG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]