| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is 124025591
Identifier: 124025591
GI number: 124025591
Start: 822597
End: 823004
Strand: Reverse
Name: 124025591
Synonym: NATL1_08841
Alternate gene names: NA
Gene position: 823004-822597 (Counterclockwise)
Preceding gene: 124025592
Following gene: 124025590
Centisome position: 44.14
GC content: 36.03
Gene sequence:
>408_bases TTGCTAGTAAGCAGAACAAAAAGTTTGAAATGTCAGTTTAAATCTATGAATGAACAGTTAAGTATTAAGGATCTTCAGAA TTATCAAAATCTTCTTGCTAGACAATTCAACGAAATAGGAAGATCGTTAGTTCTGAATAATAAAGAGACATGGGCACTGT TTCTTGCACAGAAAGAATCAGACATAATTCCTAGAGATCATTTACCCGCAGTTGAAAGCATCTTACTTGGTAGCCCAATT ATCCCCATCGAGGAATTTAGGGATATAGCGACTGAGGTTTTAAAGAAACATAAATTTTGCACTATCATTCGCGTCCTCCA CAAGATGACAAACGGGAATTTAATGCCTGAACTTATTCATCACTCTTTGAAAATGACTGCTCTAGTCCTTACTCCCGAGG TTCAATAA
Upstream 100 bases:
>100_bases CGTTGCCCGGTGATGACAGCTTTTAGGACAATGAGTGATTTACCTATTGAAAGTGAGTTGTCACAAATAAAAAACGAGGC TGAGATGTACCTAGCCCATC
Downstream 100 bases:
>100_bases AATGAAAATGATTAGCAGCTTGATCTAAATCATTATTAAATTGACAACGACCTAAGTAGCAGATCAGATTTACAAAGGAA GGATCAGTTTTATTTGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MLVSRTKSLKCQFKSMNEQLSIKDLQNYQNLLARQFNEIGRSLVLNNKETWALFLAQKESDIIPRDHLPAVESILLGSPI IPIEEFRDIATEVLKKHKFCTIIRVLHKMTNGNLMPELIHHSLKMTALVLTPEVQ
Sequences:
>Translated_135_residues MLVSRTKSLKCQFKSMNEQLSIKDLQNYQNLLARQFNEIGRSLVLNNKETWALFLAQKESDIIPRDHLPAVESILLGSPI IPIEEFRDIATEVLKKHKFCTIIRVLHKMTNGNLMPELIHHSLKMTALVLTPEVQ >Mature_135_residues MLVSRTKSLKCQFKSMNEQLSIKDLQNYQNLLARQFNEIGRSLVLNNKETWALFLAQKESDIIPRDHLPAVESILLGSPI IPIEEFRDIATEVLKKHKFCTIIRVLHKMTNGNLMPELIHHSLKMTALVLTPEVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15547; Mature: 15547
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSRTKSLKCQFKSMNEQLSIKDLQNYQNLLARQFNEIGRSLVLNNKETWALFLAQKES CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC DIIPRDHLPAVESILLGSPIIPIEEFRDIATEVLKKHKFCTIIRVLHKMTNGNLMPELIH CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH HSLKMTALVLTPEVQ HHHHHHHEEECCCCC >Mature Secondary Structure MLVSRTKSLKCQFKSMNEQLSIKDLQNYQNLLARQFNEIGRSLVLNNKETWALFLAQKES CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC DIIPRDHLPAVESILLGSPIIPIEEFRDIATEVLKKHKFCTIIRVLHKMTNGNLMPELIH CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH HSLKMTALVLTPEVQ HHHHHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA