| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025586
Identifier: 124025586
GI number: 124025586
Start: 818586
End: 820397
Strand: Reverse
Name: 124025586
Synonym: NATL1_08791
Alternate gene names: NA
Gene position: 820397-818586 (Counterclockwise)
Preceding gene: 124025587
Following gene: 124025585
Centisome position: 44.0
GC content: 26.21
Gene sequence:
>1812_bases ATGGAATTCAATATTAATCTTAAAAATCTTATCTGTATCATAATAAGCTTATTTTACTCAATCGTAGGATTGAAGCTAAA TGCATATGAAGATAATTCTAAAAAAATTAAATGGGAAATAATTAGATCTAATAATCTTAAAGACTTAGATAAGTCAATAA AGTGGGAAATAATTAGATCAAATAATCTTAAAGACTTAGATAAGTCAATAAAGTGGAAAACAATTGATAAAACAAAAGAT AGAAAAAATATAAAAAATAAAATGAAGCAAACAAAAATTCAAAATGCAAGTAAAAGTTCAAAAAAGAAATTACTTCAGCT AGGTAAATCAGTACCAACTGCCAATACATTATCTAAAGGTGATCTCATATTGGAGACTAGCCATGTAAGTTCATATAATG GAGGTCAATCAGGTGGAATAGGGAATCAAAATTATTCAGGATTAATTCAATATGGATTTTTTAAAAATCTAACAATAAGC TCTTTTTATACTGAGGCTGATGATCCATTATTTAAAAAAATAGATACCACAGCTATTCAACCAGAAAATCTTTGGTCAAA CTATGGAATAGGTTTGAGATGGAATGTAATTAACAATAATACCTATAAACTATCAATAGATAGTTCTATAGAGAGGTGGC GAGTAGGTAGTGGTGGATGTTTCGGATATAATTGTAAGAATAAAAGTAACAATATATTTAATTCAGGTATAGAAAAAGTT CTAAATGATAATTTAATAAGTTCCTTATCTATTCCAATAACCTGGACAAAATTTAATAATTTAAATTTAACGTTTTCTCC AAGATTAGTTTTTTTACCAAAAAAACAAGGAAATGATATTGGATCAGGTCAATTTTATGGAAACAATTATGGAGTTGGAA TAGGAGGAAGTTACGAGCTAAGTAAAAGAATTAAATCATTTTACTCAGGCTATTTTCCAATAAATTCGACAAATACATTT GATAATAAGATTAAATTTAAACGTACAAATTTACATACGATTGGTCTGAACTATGAACTAGATTCAAGAACTTGGTTAGA AGGTTATGTAACAAATAGTTTTGGTCAAACACCAGCAACATCAATACTAACTATTCCAAGTAGTGAAGATATTATTTATG GAGGTAGGTTTATCTATGCACCAATATTAGAAAATAGAAACATAACAGAAGATAACAAAAAGAAATATAATTTGTTCAGG TTATTTCGTAAACAGATTAAAGTAGGAATGAATGGGAACGGAAGTTATTATAAAGGAATTCTAGGATTATCTGAATCATT TAATTTTGAAATAACAAATGAAACAATCTATAAACATATGGAGAAAAAAAAGAAAATAATAGATAGATATATTAAACCTG GAACTAATAGTATTAGAGGTGGTGGAACAGCAAACTTACTAAATATAGATAATGGGGATAAAATAAATCTATCTCTACGT TTAACATATGGTAGAGCGATGAGTAAAACAAGACCAGGATATTTATTTAGTGAATTAATAAATGATTGGATAATAAATGA TAATAATAGTATTAATTTTAGTCCAAAGATTGCATGGACAGGAACAAAGAATTTAATAGGTGTAGGAACAAGCTATAACT GGAAACTAAGCCCAAACTTTGAAATAATTCCAAAATACAATATTGGTATAACCAATTCACATAATAATTATAATATTATG TTAAAAACTAAAATAAAAAAATATTTAGAAATTGATTCATATTTAAGTAATACAATAAGTCAAAACGATATAGGTCAATT GATCAAATCATCATCGCCAGTATTTGGATTAAATTTAAATTTCAAACTTTAA
Upstream 100 bases:
>100_bases GATGAAGATCTACCAACATATTTATCTATTATTTATTTAGATGAGGCAATAACTCCTAAATTAGATATAGCATATAAAAA ATTAAAAGCATATTAGAGAT
Downstream 100 bases:
>100_bases AAACTATTAATATGATTCAAGGAAGAAAGCCTAATCACCAGATTGCTGTTAAATCGAAACTCCTCTGAATCAATGTAATT ATTTTTTACGCTAATCGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 603; Mature: 603
Protein sequence:
>603_residues MEFNINLKNLICIIISLFYSIVGLKLNAYEDNSKKIKWEIIRSNNLKDLDKSIKWEIIRSNNLKDLDKSIKWKTIDKTKD RKNIKNKMKQTKIQNASKSSKKKLLQLGKSVPTANTLSKGDLILETSHVSSYNGGQSGGIGNQNYSGLIQYGFFKNLTIS SFYTEADDPLFKKIDTTAIQPENLWSNYGIGLRWNVINNNTYKLSIDSSIERWRVGSGGCFGYNCKNKSNNIFNSGIEKV LNDNLISSLSIPITWTKFNNLNLTFSPRLVFLPKKQGNDIGSGQFYGNNYGVGIGGSYELSKRIKSFYSGYFPINSTNTF DNKIKFKRTNLHTIGLNYELDSRTWLEGYVTNSFGQTPATSILTIPSSEDIIYGGRFIYAPILENRNITEDNKKKYNLFR LFRKQIKVGMNGNGSYYKGILGLSESFNFEITNETIYKHMEKKKKIIDRYIKPGTNSIRGGGTANLLNIDNGDKINLSLR LTYGRAMSKTRPGYLFSELINDWIINDNNSINFSPKIAWTGTKNLIGVGTSYNWKLSPNFEIIPKYNIGITNSHNNYNIM LKTKIKKYLEIDSYLSNTISQNDIGQLIKSSSPVFGLNLNFKL
Sequences:
>Translated_603_residues MEFNINLKNLICIIISLFYSIVGLKLNAYEDNSKKIKWEIIRSNNLKDLDKSIKWEIIRSNNLKDLDKSIKWKTIDKTKD RKNIKNKMKQTKIQNASKSSKKKLLQLGKSVPTANTLSKGDLILETSHVSSYNGGQSGGIGNQNYSGLIQYGFFKNLTIS SFYTEADDPLFKKIDTTAIQPENLWSNYGIGLRWNVINNNTYKLSIDSSIERWRVGSGGCFGYNCKNKSNNIFNSGIEKV LNDNLISSLSIPITWTKFNNLNLTFSPRLVFLPKKQGNDIGSGQFYGNNYGVGIGGSYELSKRIKSFYSGYFPINSTNTF DNKIKFKRTNLHTIGLNYELDSRTWLEGYVTNSFGQTPATSILTIPSSEDIIYGGRFIYAPILENRNITEDNKKKYNLFR LFRKQIKVGMNGNGSYYKGILGLSESFNFEITNETIYKHMEKKKKIIDRYIKPGTNSIRGGGTANLLNIDNGDKINLSLR LTYGRAMSKTRPGYLFSELINDWIINDNNSINFSPKIAWTGTKNLIGVGTSYNWKLSPNFEIIPKYNIGITNSHNNYNIM LKTKIKKYLEIDSYLSNTISQNDIGQLIKSSSPVFGLNLNFKL >Mature_603_residues MEFNINLKNLICIIISLFYSIVGLKLNAYEDNSKKIKWEIIRSNNLKDLDKSIKWEIIRSNNLKDLDKSIKWKTIDKTKD RKNIKNKMKQTKIQNASKSSKKKLLQLGKSVPTANTLSKGDLILETSHVSSYNGGQSGGIGNQNYSGLIQYGFFKNLTIS SFYTEADDPLFKKIDTTAIQPENLWSNYGIGLRWNVINNNTYKLSIDSSIERWRVGSGGCFGYNCKNKSNNIFNSGIEKV LNDNLISSLSIPITWTKFNNLNLTFSPRLVFLPKKQGNDIGSGQFYGNNYGVGIGGSYELSKRIKSFYSGYFPINSTNTF DNKIKFKRTNLHTIGLNYELDSRTWLEGYVTNSFGQTPATSILTIPSSEDIIYGGRFIYAPILENRNITEDNKKKYNLFR LFRKQIKVGMNGNGSYYKGILGLSESFNFEITNETIYKHMEKKKKIIDRYIKPGTNSIRGGGTANLLNIDNGDKINLSLR LTYGRAMSKTRPGYLFSELINDWIINDNNSINFSPKIAWTGTKNLIGVGTSYNWKLSPNFEIIPKYNIGITNSHNNYNIM LKTKIKKYLEIDSYLSNTISQNDIGQLIKSSSPVFGLNLNFKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68523; Mature: 68523
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFNINLKNLICIIISLFYSIVGLKLNAYEDNSKKIKWEIIRSNNLKDLDKSIKWEIIRS CEEECCHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEEECCCHHHHCCCCEEEEEEC NNLKDLDKSIKWKTIDKTKDRKNIKNKMKQTKIQNASKSSKKKLLQLGKSVPTANTLSKG CCCHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC DLILETSHVSSYNGGQSGGIGNQNYSGLIQYGFFKNLTISSFYTEADDPLFKKIDTTAIQ CEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCHHHHHCCCCCCC PENLWSNYGIGLRWNVINNNTYKLSIDSSIERWRVGSGGCFGYNCKNKSNNIFNSGIEKV CHHHHHCCCCCEEEEEECCCEEEEEECCCCHHEECCCCCEEEECCCCCCCCHHHHHHHHH LNDNLISSLSIPITWTKFNNLNLTFSPRLVFLPKKQGNDIGSGQFYGNNYGVGIGGSYEL HCCCHHHHEECEEEEEEECCEEEEECCEEEEEECCCCCCCCCCEEECCCEEECCCCCHHH SKRIKSFYSGYFPINSTNTFDNKIKFKRTNLHTIGLNYELDSRTWLEGYVTNSFGQTPAT HHHHHHHHCCCCCCCCCCCCCCEEEEEECEEEEEEEEEEECCCEEEEEEEECCCCCCCCC SILTIPSSEDIIYGGRFIYAPILENRNITEDNKKKYNLFRLFRKQIKVGMNGNGSYYKGI EEEECCCCCCEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCEEEEE LGLSESFNFEITNETIYKHMEKKKKIIDRYIKPGTNSIRGGGTANLLNIDNGDKINLSLR EECCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEE LTYGRAMSKTRPGYLFSELINDWIINDNNSINFSPKIAWTGTKNLIGVGTSYNWKLSPNF EEECCHHCCCCCCHHHHHHHHHEEECCCCCEEECCEEEECCCCCEEECCCCEEEEECCCC EIIPKYNIGITNSHNNYNIMLKTKIKKYLEIDSYLSNTISQNDIGQLIKSSSPVFGLNLN EEEEEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEE FKL EEC >Mature Secondary Structure MEFNINLKNLICIIISLFYSIVGLKLNAYEDNSKKIKWEIIRSNNLKDLDKSIKWEIIRS CEEECCHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEEECCCHHHHCCCCEEEEEEC NNLKDLDKSIKWKTIDKTKDRKNIKNKMKQTKIQNASKSSKKKLLQLGKSVPTANTLSKG CCCHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC DLILETSHVSSYNGGQSGGIGNQNYSGLIQYGFFKNLTISSFYTEADDPLFKKIDTTAIQ CEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCHHHHHCCCCCCC PENLWSNYGIGLRWNVINNNTYKLSIDSSIERWRVGSGGCFGYNCKNKSNNIFNSGIEKV CHHHHHCCCCCEEEEEECCCEEEEEECCCCHHEECCCCCEEEECCCCCCCCHHHHHHHHH LNDNLISSLSIPITWTKFNNLNLTFSPRLVFLPKKQGNDIGSGQFYGNNYGVGIGGSYEL HCCCHHHHEECEEEEEEECCEEEEECCEEEEEECCCCCCCCCCEEECCCEEECCCCCHHH SKRIKSFYSGYFPINSTNTFDNKIKFKRTNLHTIGLNYELDSRTWLEGYVTNSFGQTPAT HHHHHHHHCCCCCCCCCCCCCCEEEEEECEEEEEEEEEEECCCEEEEEEEECCCCCCCCC SILTIPSSEDIIYGGRFIYAPILENRNITEDNKKKYNLFRLFRKQIKVGMNGNGSYYKGI EEEECCCCCCEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCEEEEE LGLSESFNFEITNETIYKHMEKKKKIIDRYIKPGTNSIRGGGTANLLNIDNGDKINLSLR EECCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEE LTYGRAMSKTRPGYLFSELINDWIINDNNSINFSPKIAWTGTKNLIGVGTSYNWKLSPNF EEECCHHCCCCCCHHHHHHHHHEEECCCCCEEECCEEEECCCCCEEECCCCEEEEECCCC EIIPKYNIGITNSHNNYNIMLKTKIKKYLEIDSYLSNTISQNDIGQLIKSSSPVFGLNLN EEEEEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEE FKL EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA