| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025578
Identifier: 124025578
GI number: 124025578
Start: 807555
End: 808775
Strand: Reverse
Name: 124025578
Synonym: NATL1_08711
Alternate gene names: NA
Gene position: 808775-807555 (Counterclockwise)
Preceding gene: 124025585
Following gene: 124025577
Centisome position: 43.37
GC content: 33.17
Gene sequence:
>1221_bases ATGGAATCACTTTATGGAACACCTGAAATAATTTGTTTTTGCAAAAATTGCGTAATATCAAATCAAAGACCTCGATCAAC AATTGAGTTTAAACATACAAGTTCTGACAAGAAACAAACTATGGGCTTTGATGAAAATGGTATTTGTGATGCGTGTAAAT ACAGTCAAGTAAAGGCAAACTTAATAGACTGGAAACTTAGAGAAAGCAAATTAATTGAATTATTAGATAAATACAGAAAA AACAATGGTCAATATGATGTTGTAGTACCAGGCAGTGGAGGTAAGGACAGTGCTTTTACATCTCACATACTAAAATACAA ATATGGAATGAATCCGCTAACTGTAACTTGGGCGCCACATTTATACACAGATATAGGATGGAAAAACTTCACAAACTGGT CCCATATTGGCGGACACGATAATTTATTATTCACCCCTAATGGAAAATTACATAGACACCTTACTCGATTAGCATTTTTA AACTTATTACATCCTTTTCAGCCTTTTATTGTTGGTCAAAGAATCATTGGTCCATTACTAGCAGCCAAACATGGTATCAG TTTAGTAATGTATGGAGAAAATCAAGCTGAATATGGAAATGATCCAAATGAAAACTTTGATCCAACAATGGACCAAAAGT TCTTTACAGAGGGTAATCCTCTAGAGATGAAACTTGGTGGTATTTCAATCAAGGATATAATTAAAAGTAGTGAATTCACG CTTCAAGATTTTTCACCTTATATTCCTCCATCTGCTGAATTCTTAGAGAAACAAAAGGTAGTGGTTCATTACCTAGGATA TTATCTCGAATGGGATCCACAAGAATGTTATTACTACGCTGTTGAAAATACAGGCTTTGAGGCGAATACGGAAAGAACAC CTGGCACATATTCTAAATATTCCAGTATTGATGACAAAATTGATATGTTTCACTATTACACAACATACATAAAATTTGGT ATTGGTAGGGCTACCTATGATGCATCACAAGAAATACGAAATGGGAAAATAACTAGAGAAGAGGGTGTGCATTTAGTAAA TAAGTATGATGCAGAATTTCCAGAAAAATACTTCAAAGATTTCTTAGAATATATTGATATAGATCGAGAAAAATTTATAG AGACAGTAGATAATGCCAGGTCACCTCACCTTTGGGAGAAAGTAAATAATGAATGGAAATTAAGGTATAAAGTTAGTAAT AAAAACCATTTTGATTCGTAG
Upstream 100 bases:
>100_bases AGAGCTAAAGCTTCATTTTGGAAGAGTTTTCAAAATTGAAAATATGCCACTAAACAGTCTAGACTTCTAGCTAAATAACT TATTAAGCTCAAATATTTTA
Downstream 100 bases:
>100_bases TAATTGTATTAAAAAAAATAAAATGGTCTTAAATTGTTTACATATAGCTAGTTTTACTGGGACATTGGAGACAATGCAAA TCATAAAGGATTCTATCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MESLYGTPEIICFCKNCVISNQRPRSTIEFKHTSSDKKQTMGFDENGICDACKYSQVKANLIDWKLRESKLIELLDKYRK NNGQYDVVVPGSGGKDSAFTSHILKYKYGMNPLTVTWAPHLYTDIGWKNFTNWSHIGGHDNLLFTPNGKLHRHLTRLAFL NLLHPFQPFIVGQRIIGPLLAAKHGISLVMYGENQAEYGNDPNENFDPTMDQKFFTEGNPLEMKLGGISIKDIIKSSEFT LQDFSPYIPPSAEFLEKQKVVVHYLGYYLEWDPQECYYYAVENTGFEANTERTPGTYSKYSSIDDKIDMFHYYTTYIKFG IGRATYDASQEIRNGKITREEGVHLVNKYDAEFPEKYFKDFLEYIDIDREKFIETVDNARSPHLWEKVNNEWKLRYKVSN KNHFDS
Sequences:
>Translated_406_residues MESLYGTPEIICFCKNCVISNQRPRSTIEFKHTSSDKKQTMGFDENGICDACKYSQVKANLIDWKLRESKLIELLDKYRK NNGQYDVVVPGSGGKDSAFTSHILKYKYGMNPLTVTWAPHLYTDIGWKNFTNWSHIGGHDNLLFTPNGKLHRHLTRLAFL NLLHPFQPFIVGQRIIGPLLAAKHGISLVMYGENQAEYGNDPNENFDPTMDQKFFTEGNPLEMKLGGISIKDIIKSSEFT LQDFSPYIPPSAEFLEKQKVVVHYLGYYLEWDPQECYYYAVENTGFEANTERTPGTYSKYSSIDDKIDMFHYYTTYIKFG IGRATYDASQEIRNGKITREEGVHLVNKYDAEFPEKYFKDFLEYIDIDREKFIETVDNARSPHLWEKVNNEWKLRYKVSN KNHFDS >Mature_406_residues MESLYGTPEIICFCKNCVISNQRPRSTIEFKHTSSDKKQTMGFDENGICDACKYSQVKANLIDWKLRESKLIELLDKYRK NNGQYDVVVPGSGGKDSAFTSHILKYKYGMNPLTVTWAPHLYTDIGWKNFTNWSHIGGHDNLLFTPNGKLHRHLTRLAFL NLLHPFQPFIVGQRIIGPLLAAKHGISLVMYGENQAEYGNDPNENFDPTMDQKFFTEGNPLEMKLGGISIKDIIKSSEFT LQDFSPYIPPSAEFLEKQKVVVHYLGYYLEWDPQECYYYAVENTGFEANTERTPGTYSKYSSIDDKIDMFHYYTTYIKFG IGRATYDASQEIRNGKITREEGVHLVNKYDAEFPEKYFKDFLEYIDIDREKFIETVDNARSPHLWEKVNNEWKLRYKVSN KNHFDS
Specific function: Unknown
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47193; Mature: 47193
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLYGTPEIICFCKNCVISNQRPRSTIEFKHTSSDKKQTMGFDENGICDACKYSQVKAN CCCCCCCHHHEEEEHHHHCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCHHHHHHHHHH LIDWKLRESKLIELLDKYRKNNGQYDVVVPGSGGKDSAFTSHILKYKYGMNPLTVTWAPH HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCH LYTDIGWKNFTNWSHIGGHDNLLFTPNGKLHRHLTRLAFLNLLHPFQPFIVGQRIIGPLL HHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAKHGISLVMYGENQAEYGNDPNENFDPTMDQKFFTEGNPLEMKLGGISIKDIIKSSEFT HHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCEEHHHHHCCCCCC LQDFSPYIPPSAEFLEKQKVVVHYLGYYLEWDPQECYYYAVENTGFEANTERTPGTYSKY HHCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCHHH SSIDDKIDMFHYYTTYIKFGIGRATYDASQEIRNGKITREEGVHLVNKYDAEFPEKYFKD HCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCCHHHCCEEHHHHCCCCHHHHHHH FLEYIDIDREKFIETVDNARSPHLWEKVNNEWKLRYKVSNKNHFDS HHHHHCCCHHHHHHHHHCCCCCHHHHHCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MESLYGTPEIICFCKNCVISNQRPRSTIEFKHTSSDKKQTMGFDENGICDACKYSQVKAN CCCCCCCHHHEEEEHHHHCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCHHHHHHHHHH LIDWKLRESKLIELLDKYRKNNGQYDVVVPGSGGKDSAFTSHILKYKYGMNPLTVTWAPH HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCH LYTDIGWKNFTNWSHIGGHDNLLFTPNGKLHRHLTRLAFLNLLHPFQPFIVGQRIIGPLL HHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAKHGISLVMYGENQAEYGNDPNENFDPTMDQKFFTEGNPLEMKLGGISIKDIIKSSEFT HHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCEEHHHHHCCCCCC LQDFSPYIPPSAEFLEKQKVVVHYLGYYLEWDPQECYYYAVENTGFEANTERTPGTYSKY HHCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCHHH SSIDDKIDMFHYYTTYIKFGIGRATYDASQEIRNGKITREEGVHLVNKYDAEFPEKYFKD HCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCCHHHCCEEHHHHCCCCHHHHHHH FLEYIDIDREKFIETVDNARSPHLWEKVNNEWKLRYKVSNKNHFDS HHHHHCCCHHHHHHHHHCCCCCHHHHHCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA