Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is eda

Identifier: 124025018

GI number: 124025018

Start: 283012

End: 283647

Strand: Reverse

Name: eda

Synonym: NATL1_03051

Alternate gene names: NA

Gene position: 283647-283012 (Counterclockwise)

Preceding gene: 124025019

Following gene: 124025015

Centisome position: 15.21

GC content: 26.1

Gene sequence:

>636_bases
TTGGAAGCTAAGCAAAATAATTTAATAAAATCTCTTAGGATACAGCCGCTTATAGTTGTAATTAGACTAGAACATAATTT
TTTTAATCTCTCAAAAAAAAAGGAAAATTTACTTTCTAAAATTGAAAAATTGTCTAATTTTGGTATAAAAAATATTGAAA
TAGGGTGGGATTCTAATCCAGAATGGGTAAATTTAATATTAGAAATAAAAAAAAGATTCAAATCAATTAATATTGGTGTT
GCATCAATTTCTTCAAGGCAATCTTTAGAATCAATTCTCTCATTAGATGTTAATTATTCGATGAGTCAATTCTTTAATAA
AGAAATTCATATACAAGCCATTGAATACAATCAATTAGTTATTCCGGGGATATCAAATATTGAAAATTTCAAAGAGGCAA
TCGATCTAGGATATAAAATTGTAAAAATCTTTCCAGCATCAAAATTAGGAATTAACTTTATAAATGAATTAAAAGACTTT
AAAAAAAAGGATATTTTTTTTATTGGTGCAGGTGGAATTAAAAGTAAGAATTTAAAAAAATTCCTAAAAAGTGGATATGA
TGCTTTGGTCATCGGAAGAGAATTGCGAAATCAAACACCTGATAAAGACCTAGAAATATGGCTAGAGGATTACTGA

Upstream 100 bases:

>100_bases
CTTATGGAAACTGAGACAGTTGATTCTCTAGAGTTCCAGGATTTGTTAATTCGCCATGAAGTTAAAGTTGCTGAATATGC
TTAGTTGAAAAATATAATTC

Downstream 100 bases:

>100_bases
TAATCTATTCTAAAAATCAACAATATATTCCTTGTCTAGCATTGCATCTTAAATAATTATTTATTTGAACATTAGTCAGT
ACATTGGCCTCTTTGCCTTA

Product: 2-keto-3-deoxy-6-phosphogluconate aldolase

Products: pyruvate; D-glyceraldehyde 3-phosphate

Alternate protein names: Aldolase; 2-Keto-3-Deoxy-Phosphogluconate Aldolase; 2-Dehydro-3-Deoxyphosphogluconate Aldolase

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MEAKQNNLIKSLRIQPLIVVIRLEHNFFNLSKKKENLLSKIEKLSNFGIKNIEIGWDSNPEWVNLILEIKKRFKSINIGV
ASISSRQSLESILSLDVNYSMSQFFNKEIHIQAIEYNQLVIPGISNIENFKEAIDLGYKIVKIFPASKLGINFINELKDF
KKKDIFFIGAGGIKSKNLKKFLKSGYDALVIGRELRNQTPDKDLEIWLEDY

Sequences:

>Translated_211_residues
MEAKQNNLIKSLRIQPLIVVIRLEHNFFNLSKKKENLLSKIEKLSNFGIKNIEIGWDSNPEWVNLILEIKKRFKSINIGV
ASISSRQSLESILSLDVNYSMSQFFNKEIHIQAIEYNQLVIPGISNIENFKEAIDLGYKIVKIFPASKLGINFINELKDF
KKKDIFFIGAGGIKSKNLKKFLKSGYDALVIGRELRNQTPDKDLEIWLEDY
>Mature_211_residues
MEAKQNNLIKSLRIQPLIVVIRLEHNFFNLSKKKENLLSKIEKLSNFGIKNIEIGWDSNPEWVNLILEIKKRFKSINIGV
ASISSRQSLESILSLDVNYSMSQFFNKEIHIQAIEYNQLVIPGISNIENFKEAIDLGYKIVKIFPASKLGINFINELKDF
KKKDIFFIGAGGIKSKNLKKFLKSGYDALVIGRELRNQTPDKDLEIWLEDY

Specific function: Unknown

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.1.2.14; 4.1.3.16

Molecular weight: Translated: 24349; Mature: 24349

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAKQNNLIKSLRIQPLIVVIRLEHNFFNLSKKKENLLSKIEKLSNFGIKNIEIGWDSNP
CCCCHHHHHHHHCCCEEEEEEEEECCHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCH
EWVNLILEIKKRFKSINIGVASISSRQSLESILSLDVNYSMSQFFNKEIHIQAIEYNQLV
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEECCEEE
IPGISNIENFKEAIDLGYKIVKIFPASKLGINFINELKDFKKKDIFFIGAGGIKSKNLKK
ECCCCCHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHH
FLKSGYDALVIGRELRNQTPDKDLEIWLEDY
HHHCCCCEEEEEHHHHCCCCCCCEEEEEECC
>Mature Secondary Structure
MEAKQNNLIKSLRIQPLIVVIRLEHNFFNLSKKKENLLSKIEKLSNFGIKNIEIGWDSNP
CCCCHHHHHHHHCCCEEEEEEEEECCHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCH
EWVNLILEIKKRFKSINIGVASISSRQSLESILSLDVNYSMSQFFNKEIHIQAIEYNQLV
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEECCEEE
IPGISNIENFKEAIDLGYKIVKIFPASKLGINFINELKDFKKKDIFFIGAGGIKSKNLKK
ECCCCCHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHH
FLKSGYDALVIGRELRNQTPDKDLEIWLEDY
HHHCCCCEEEEEHHHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-dehydro-3-deoxy-D-gluconate 6-phosphate

Specific reaction: 2-dehydro-3-deoxy-D-gluconate 6-phosphate = pyruvate + D-glyceraldehyde 3-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA