| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024881
Identifier: 124024881
GI number: 124024881
Start: 161816
End: 163165
Strand: Reverse
Name: 124024881
Synonym: NATL1_01681
Alternate gene names: NA
Gene position: 163165-161816 (Counterclockwise)
Preceding gene: 124024882
Following gene: 124024880
Centisome position: 8.75
GC content: 36.44
Gene sequence:
>1350_bases ATGAGCACATTAAAGATAACTCAAAACAAAATTAAACCTGCTGTTGTTGCCTCCATCGAAGAAGGTTCTATAGGCGAGGA GCTTGGATTTGAAGTTGGAGATCGATTAATTAGTATTAATGGTGTAAAGCCAAGAGATCTTATTGATTACAAATTTCTTA TGGCTGAAGAAAATATTCAATTAATAATATTAGATGAAAAAGATAAACAACATACAATTGACATTGAAAAAGATTATGAC GATGAGTTAGGACTTGCTTTTACTGAAGCTTTATTTGATGGATTAAAACAATGCAATAATCAATGTCCATTTTGTTTTAT TGACCAACAACCCCCAGGGAAAAGAAAAAGCCTGTACCTAAAAGATGATGACTACAGGCTAAGTTTTTTATATGGTTCTT ACTTAACACTTACAAATCTTTCCGAACAAGACTGGAAGAGAATTGATCAACAAAGACTAACTCCTTTATTTGTATCAGTG CATGCAACAGAACCTTCTTTAAGGTCGAAATTACTAAGAAATCCTAAAGCTATTGACCTTTTAAATCAGTTGGCTTGGTT CTCAAAAAAAAGAATACAAATTCATGCTCAAATTGTTGTTTGCCCTGAAATAAATGATGGAAAAGCTTTAGAACGAACAA TCAATGATCTATATAGTTTTGCGCAAGGAGATTTTCCCGTAGTCCTCTCAGCAGCTGTAGTTCCAGTTGGGCTAACAAGG TTTCGACCCAGTAATGACGGGCTGATACCCGTAGATCCTGATTGTGCGACAAAAGTAATCAATCAAGTTGAGCCAATGCA AAGAATATTTTATAAATCAACGGGGTCCCGTTTTGCTTGGTTATCTGACGAATGGTATTTAATAGCGAAGAAGGCTTTAC CCACTCTTAATTCTTACGAAGATTTACCTCAAAAAGAGAATGGTGTAGGAAGTATTCGCAGTTTTCTTAGAGCAATGGAT GAAGCCACAAGAGATCTGCCGACCAAAATTGATCAAAAGAAAACCTGCAGCTGGGTTGTTGGCAAACTTGTTGAAAATGA ATTACTGAAGCCTTGCAAGCGAATAAATAAAATAAATAATTTCGCACTCCATCTTTATGGGCTTCCAAGTCCCTATTGGG GGCAAGAACAAATAGTTACTGGCCTACTCACAGGCCAAGACCTCATAAAAGGACTGCGAGGAAAAGAATTAGGCGATGAA TTACTTATACCATCGGTCATGCTAAGGCAAGGTGAAAAAATCTTTCTTGATGACATGACACTTCAAGAGCTCTCTTTGTC ACTTAATGTATCTGTAAGAATTGTCCATGATGCACAAGACATCGTGAACAAAGCACTTGGTAAAGCATAA
Upstream 100 bases:
>100_bases TTTACTAATATTAAAAAATAAATGATTCTTCAAGATCAATTTAATTTTTTCAAACCACCCGAGAAGTATAAAAAATTTAT TTTCTTGTTTAGGAGCCTAA
Downstream 100 bases:
>100_bases TTGCTTTACCAAATCCATCTCAGTTTTTCTTATAACTATGAGGAGAGTGAAGAGAAAGTTTCTAATTGTTGCAGGTTTAT TTATATCTGGGCTAAATCCT
Product: putative Fe-S oxidoreductase
Products: NA
Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MSTLKITQNKIKPAVVASIEEGSIGEELGFEVGDRLISINGVKPRDLIDYKFLMAEENIQLIILDEKDKQHTIDIEKDYD DELGLAFTEALFDGLKQCNNQCPFCFIDQQPPGKRKSLYLKDDDYRLSFLYGSYLTLTNLSEQDWKRIDQQRLTPLFVSV HATEPSLRSKLLRNPKAIDLLNQLAWFSKKRIQIHAQIVVCPEINDGKALERTINDLYSFAQGDFPVVLSAAVVPVGLTR FRPSNDGLIPVDPDCATKVINQVEPMQRIFYKSTGSRFAWLSDEWYLIAKKALPTLNSYEDLPQKENGVGSIRSFLRAMD EATRDLPTKIDQKKTCSWVVGKLVENELLKPCKRINKINNFALHLYGLPSPYWGQEQIVTGLLTGQDLIKGLRGKELGDE LLIPSVMLRQGEKIFLDDMTLQELSLSLNVSVRIVHDAQDIVNKALGKA
Sequences:
>Translated_449_residues MSTLKITQNKIKPAVVASIEEGSIGEELGFEVGDRLISINGVKPRDLIDYKFLMAEENIQLIILDEKDKQHTIDIEKDYD DELGLAFTEALFDGLKQCNNQCPFCFIDQQPPGKRKSLYLKDDDYRLSFLYGSYLTLTNLSEQDWKRIDQQRLTPLFVSV HATEPSLRSKLLRNPKAIDLLNQLAWFSKKRIQIHAQIVVCPEINDGKALERTINDLYSFAQGDFPVVLSAAVVPVGLTR FRPSNDGLIPVDPDCATKVINQVEPMQRIFYKSTGSRFAWLSDEWYLIAKKALPTLNSYEDLPQKENGVGSIRSFLRAMD EATRDLPTKIDQKKTCSWVVGKLVENELLKPCKRINKINNFALHLYGLPSPYWGQEQIVTGLLTGQDLIKGLRGKELGDE LLIPSVMLRQGEKIFLDDMTLQELSLSLNVSVRIVHDAQDIVNKALGKA >Mature_448_residues STLKITQNKIKPAVVASIEEGSIGEELGFEVGDRLISINGVKPRDLIDYKFLMAEENIQLIILDEKDKQHTIDIEKDYDD ELGLAFTEALFDGLKQCNNQCPFCFIDQQPPGKRKSLYLKDDDYRLSFLYGSYLTLTNLSEQDWKRIDQQRLTPLFVSVH ATEPSLRSKLLRNPKAIDLLNQLAWFSKKRIQIHAQIVVCPEINDGKALERTINDLYSFAQGDFPVVLSAAVVPVGLTRF RPSNDGLIPVDPDCATKVINQVEPMQRIFYKSTGSRFAWLSDEWYLIAKKALPTLNSYEDLPQKENGVGSIRSFLRAMDE ATRDLPTKIDQKKTCSWVVGKLVENELLKPCKRINKINNFALHLYGLPSPYWGQEQIVTGLLTGQDLIKGLRGKELGDEL LIPSVMLRQGEKIFLDDMTLQELSLSLNVSVRIVHDAQDIVNKALGKA
Specific function: Unknown
COG id: COG1625
COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50828; Mature: 50697
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLKITQNKIKPAVVASIEEGSIGEELGFEVGDRLISINGVKPRDLIDYKFLMAEENIQ CCCEECCHHCCCCEEEEECCCCCCCHHHCHHHCCEEEEECCCCCCHHHCEEEEEECCCEE LIILDEKDKQHTIDIEKDYDDELGLAFTEALFDGLKQCNNQCPFCFIDQQPPGKRKSLYL EEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEE KDDDYRLSFLYGSYLTLTNLSEQDWKRIDQQRLTPLFVSVHATEPSLRSKLLRNPKAIDL ECCCEEEEEEECCEEEECCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCHHHHH LNQLAWFSKKRIQIHAQIVVCPEINDGKALERTINDLYSFAQGDFPVVLSAAVVPVGLTR HHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FRPSNDGLIPVDPDCATKVINQVEPMQRIFYKSTGSRFAWLSDEWYLIAKKALPTLNSYE CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEHHCCCCCCHH DLPQKENGVGSIRSFLRAMDEATRDLPTKIDQKKTCSWVVGKLVENELLKPCKRINKINN CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC FALHLYGLPSPYWGQEQIVTGLLTGQDLIKGLRGKELGDELLIPSVMLRQGEKIFLDDMT EEEEEEECCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEECCCC LQELSLSLNVSVRIVHDAQDIVNKALGKA HHHHEEEEEEEEEEEECHHHHHHHHHCCC >Mature Secondary Structure STLKITQNKIKPAVVASIEEGSIGEELGFEVGDRLISINGVKPRDLIDYKFLMAEENIQ CCEECCHHCCCCEEEEECCCCCCCHHHCHHHCCEEEEECCCCCCHHHCEEEEEECCCEE LIILDEKDKQHTIDIEKDYDDELGLAFTEALFDGLKQCNNQCPFCFIDQQPPGKRKSLYL EEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEE KDDDYRLSFLYGSYLTLTNLSEQDWKRIDQQRLTPLFVSVHATEPSLRSKLLRNPKAIDL ECCCEEEEEEECCEEEECCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCHHHHH LNQLAWFSKKRIQIHAQIVVCPEINDGKALERTINDLYSFAQGDFPVVLSAAVVPVGLTR HHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FRPSNDGLIPVDPDCATKVINQVEPMQRIFYKSTGSRFAWLSDEWYLIAKKALPTLNSYE CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEHHCCCCCCHH DLPQKENGVGSIRSFLRAMDEATRDLPTKIDQKKTCSWVVGKLVENELLKPCKRINKINN CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC FALHLYGLPSPYWGQEQIVTGLLTGQDLIKGLRGKELGDELLIPSVMLRQGEKIFLDDMT EEEEEEECCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEECCCC LQELSLSLNVSVRIVHDAQDIVNKALGKA HHHHEEEEEEEEEEEECHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA