| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is bcp [H]
Identifier: 124024857
GI number: 124024857
Start: 142515
End: 142982
Strand: Direct
Name: bcp [H]
Synonym: NATL1_01441
Alternate gene names: 124024857
Gene position: 142515-142982 (Clockwise)
Preceding gene: 124024855
Following gene: 124024860
Centisome position: 7.64
GC content: 33.33
Gene sequence:
>468_bases ATGACTCTCTGTATAGGCGATTCTGCACCAGATTTCACTCTTCCTAATCAAGATGGTGTGGATATCAGTCTTTCATCATT CCAAGGATCGAGAGTAGTAATTTATTTTTATCCAAAGGATGATACTCCTGGATGCACTAAGGAAGCTTGCAGTTTTAGAG ATAATTGGGAGCTTTTCAAATCAAACAATATTCAAGTTTTAGGAATTAGTAAGGACGCCTCAAAATCGCATATAAAGTTC ATTGATAAACATAAATTACCTTTTACACTTTTAACCGATAGTGACCCATGCCCTGTCGCGGCATCATACGAAAGTTATGG CTTGAAGAAATTTATGGGTAGAGAGTATTATGGAATGATGAGACACACTTTCGTTGTAAACAAATACGGGAAAATTGAAT TAATATATTTAAAAGTTAAATCAGATAATATGGCTAATCAGATTTTAAATGATCTTAAATTGAATTAA
Upstream 100 bases:
>100_bases AACCCATTTTTTTTCTTCGCTGCTTATTGGTAAAAGTTTTGATGGCATCAAAAAAAGCCAAAGACCTAGTACTCTTTTAT TGTTTATTTGAGTTGTTATC
Downstream 100 bases:
>100_bases TTTTTTTGTATATATCAATCATTCCTTCTAGAACTAGATTCGGAGAATGATTGATATCAATATTTGTATTTTTGAGTTCA TTTAATATGATTGGAGCATC
Product: putative bacterioferritin comigratory (BCP) protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTLCIGDSAPDFTLPNQDGVDISLSSFQGSRVVIYFYPKDDTPGCTKEACSFRDNWELFKSNNIQVLGISKDASKSHIKF IDKHKLPFTLLTDSDPCPVAASYESYGLKKFMGREYYGMMRHTFVVNKYGKIELIYLKVKSDNMANQILNDLKLN
Sequences:
>Translated_155_residues MTLCIGDSAPDFTLPNQDGVDISLSSFQGSRVVIYFYPKDDTPGCTKEACSFRDNWELFKSNNIQVLGISKDASKSHIKF IDKHKLPFTLLTDSDPCPVAASYESYGLKKFMGREYYGMMRHTFVVNKYGKIELIYLKVKSDNMANQILNDLKLN >Mature_154_residues TLCIGDSAPDFTLPNQDGVDISLSSFQGSRVVIYFYPKDDTPGCTKEACSFRDNWELFKSNNIQVLGISKDASKSHIKFI DKHKLPFTLLTDSDPCPVAASYESYGLKKFMGREYYGMMRHTFVVNKYGKIELIYLKVKSDNMANQILNDLKLN
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=151, Percent_Identity=45.0331125827815, Blast_Score=133, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6322180, Length=93, Percent_Identity=46.2365591397849, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17598; Mature: 17467
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLCIGDSAPDFTLPNQDGVDISLSSFQGSRVVIYFYPKDDTPGCTKEACSFRDNWELFK CEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCHHHHCCCCCCEEEE SNNIQVLGISKDASKSHIKFIDKHKLPFTLLTDSDPCPVAASYESYGLKKFMGREYYGMM CCCEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCCEEECCHHCCHHHHHCCHHHHHH RHTFVVNKYGKIELIYLKVKSDNMANQILNDLKLN HEEEEEECCCCEEEEEEEEECCCHHHHHHHHHCCC >Mature Secondary Structure TLCIGDSAPDFTLPNQDGVDISLSSFQGSRVVIYFYPKDDTPGCTKEACSFRDNWELFK EEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCHHHHCCCCCCEEEE SNNIQVLGISKDASKSHIKFIDKHKLPFTLLTDSDPCPVAASYESYGLKKFMGREYYGMM CCCEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCCEEECCHHCCHHHHHCCHHHHHH RHTFVVNKYGKIELIYLKVKSDNMANQILNDLKLN HEEEEEECCCCEEEEEEEEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]