| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024852
Identifier: 124024852
GI number: 124024852
Start: 136586
End: 137668
Strand: Direct
Name: 124024852
Synonym: NATL1_01391
Alternate gene names: NA
Gene position: 136586-137668 (Clockwise)
Preceding gene: 124024851
Following gene: 124024853
Centisome position: 7.32
GC content: 38.13
Gene sequence:
>1083_bases GTGACTTTTGATCAAGAATCCCTGTCACGTTTAACACTTCGTCAGCTTCGTACAAAAGCTAGTGAATTAGGTATTCCTCT TTATAGTAGAAAATCTAAGGCCGATTTAGTTAAGGGTGTATTGCTGTACGAAGAAAAAAAGGAATTAGAAAAACAGTTGA TAAACAATAAAGTCCAACCATCAAGCGAAACTACATATCAAAATTCATCAGAGACCAAAGTCGTTTTTCTTCCTCGTGAT CCCGAGTGGGCATATATATTTTGGGAGATATCAGATTCTGATCGTTCTAATGCTCAAAAAGAAGGTGCTATTAGGCTTTG TTTGCGTTTAGCTGATGTCACCAATAAAAATAATGGAGAGACTAATCCTGGAACTCTTCAAGAAATTGTTGTTGATAGTC ACAGTACGGAGTGGTACTTACCTATTCCTTTAGCTGGAAGAGACTACAAGGTTGAACTCGGTTATCGAATTGGTCATAAA TGGATGTCACTCGCTCATTCATCTTCAGCCAAAGTACCTTCACTTCATCCAAGTGAGCAAATTCTTGATCAATTTGTTCC TTTTAGTCTAGAAGCCCCAGTTACTACTTCCTCTGATTCTAAGATAGAAAGTTTTGCATCAGAACAACCAGACAGTGGTT TGCATGAGCGTTTATATCAATCAGCGACCACAAAATTTAGAACTAGAAGAGTTGGTTCAGAAGAATTCCAAGAGGGTTTC CCAGGAGATCTAAATTCAAATAATGAATCTGGTAGTGGGCTTTGGGCTAGTGGCTTGAATGAATCTGGTATTGGTGGGGT TCCTCAAGCTCGTTCTTTTTGGTTGGTTGCTGATGCGGAATTAATTGTGTATGGAGCTACTGATCCCTCAGCTAAATTGT TTATCGAAGATGAAGAGGTCCCACTAGGAAATGATGGAACTTTTAGATTGCAAGTCCCATTCAGAGACGGTATTCAGAAC TATTCAATTAAAGCTATTGATAAAGATGGTGTTGATTCAAGGAACATAACAATGAAATTCGAAAGAGTTACTCCAGTTGA TAACACTAACCCAAATTCCAAAGCTGAATCAGAATGGTTTTAA
Upstream 100 bases:
>100_bases TTGCATGGAGTCAGTAGATGCTGACCACACCAACGAGAAGAGCACATTTCATCACATACTTACCGCACTGATCCCAAACA AAAAATGGAGGTTTATGAGC
Downstream 100 bases:
>100_bases CTCTAATCTCACTTGATTAATGGTTCGCTTATTTGTTGCTTTTACTCCGTTAGTAGGGGCTATTGCTTTTCCTTTATTAA TTCCTACTACGATTGAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTFDQESLSRLTLRQLRTKASELGIPLYSRKSKADLVKGVLLYEEKKELEKQLINNKVQPSSETTYQNSSETKVVFLPRD PEWAYIFWEISDSDRSNAQKEGAIRLCLRLADVTNKNNGETNPGTLQEIVVDSHSTEWYLPIPLAGRDYKVELGYRIGHK WMSLAHSSSAKVPSLHPSEQILDQFVPFSLEAPVTTSSDSKIESFASEQPDSGLHERLYQSATTKFRTRRVGSEEFQEGF PGDLNSNNESGSGLWASGLNESGIGGVPQARSFWLVADAELIVYGATDPSAKLFIEDEEVPLGNDGTFRLQVPFRDGIQN YSIKAIDKDGVDSRNITMKFERVTPVDNTNPNSKAESEWF
Sequences:
>Translated_360_residues MTFDQESLSRLTLRQLRTKASELGIPLYSRKSKADLVKGVLLYEEKKELEKQLINNKVQPSSETTYQNSSETKVVFLPRD PEWAYIFWEISDSDRSNAQKEGAIRLCLRLADVTNKNNGETNPGTLQEIVVDSHSTEWYLPIPLAGRDYKVELGYRIGHK WMSLAHSSSAKVPSLHPSEQILDQFVPFSLEAPVTTSSDSKIESFASEQPDSGLHERLYQSATTKFRTRRVGSEEFQEGF PGDLNSNNESGSGLWASGLNESGIGGVPQARSFWLVADAELIVYGATDPSAKLFIEDEEVPLGNDGTFRLQVPFRDGIQN YSIKAIDKDGVDSRNITMKFERVTPVDNTNPNSKAESEWF >Mature_359_residues TFDQESLSRLTLRQLRTKASELGIPLYSRKSKADLVKGVLLYEEKKELEKQLINNKVQPSSETTYQNSSETKVVFLPRDP EWAYIFWEISDSDRSNAQKEGAIRLCLRLADVTNKNNGETNPGTLQEIVVDSHSTEWYLPIPLAGRDYKVELGYRIGHKW MSLAHSSSAKVPSLHPSEQILDQFVPFSLEAPVTTSSDSKIESFASEQPDSGLHERLYQSATTKFRTRRVGSEEFQEGFP GDLNSNNESGSGLWASGLNESGIGGVPQARSFWLVADAELIVYGATDPSAKLFIEDEEVPLGNDGTFRLQVPFRDGIQNY SIKAIDKDGVDSRNITMKFERVTPVDNTNPNSKAESEWF
Specific function: Unknown
COG id: COG3330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40351; Mature: 40220
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDQESLSRLTLRQLRTKASELGIPLYSRKSKADLVKGVLLYEEKKELEKQLINNKVQP CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC SSETTYQNSSETKVVFLPRDPEWAYIFWEISDSDRSNAQKEGAIRLCLRLADVTNKNNGE CCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC TNPGTLQEIVVDSHSTEWYLPIPLAGRDYKVELGYRIGHKWMSLAHSSSAKVPSLHPSEQ CCCCHHHHHEECCCCCEEEEECCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCHHH ILDQFVPFSLEAPVTTSSDSKIESFASEQPDSGLHERLYQSATTKFRTRRVGSEEFQEGF HHHHHCCCEECCCEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCC PGDLNSNNESGSGLWASGLNESGIGGVPQARSFWLVADAELIVYGATDPSAKLFIEDEEV CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCEEEEECCCC PLGNDGTFRLQVPFRDGIQNYSIKAIDKDGVDSRNITMKFERVTPVDNTNPNSKAESEWF CCCCCCEEEEEECHHHCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure TFDQESLSRLTLRQLRTKASELGIPLYSRKSKADLVKGVLLYEEKKELEKQLINNKVQP CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC SSETTYQNSSETKVVFLPRDPEWAYIFWEISDSDRSNAQKEGAIRLCLRLADVTNKNNGE CCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC TNPGTLQEIVVDSHSTEWYLPIPLAGRDYKVELGYRIGHKWMSLAHSSSAKVPSLHPSEQ CCCCHHHHHEECCCCCEEEEECCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCHHH ILDQFVPFSLEAPVTTSSDSKIESFASEQPDSGLHERLYQSATTKFRTRRVGSEEFQEGF HHHHHCCCEECCCEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCC PGDLNSNNESGSGLWASGLNESGIGGVPQARSFWLVADAELIVYGATDPSAKLFIEDEEV CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCEEEEECCCC PLGNDGTFRLQVPFRDGIQNYSIKAIDKDGVDSRNITMKFERVTPVDNTNPNSKAESEWF CCCCCCEEEEEECHHHCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA