Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is dap2 [H]

Identifier: 124024846

GI number: 124024846

Start: 128762

End: 130696

Strand: Direct

Name: dap2 [H]

Synonym: NATL1_01331

Alternate gene names: 124024846

Gene position: 128762-130696 (Clockwise)

Preceding gene: 124024840

Following gene: 124024851

Centisome position: 6.91

GC content: 34.68

Gene sequence:

>1935_bases
ATGAAGAACAAAACAATGAGAATCTTGGATGCTGAAAAAGTTTATGGAGAAGCCCCCATATTTAAAGAGCCTCGTATAAT
AGGTGATTGGATTTTATGGTTAGAACAAAGACCAAACGAAAAGGGAAGAACTACAGCTTTAATCAGACCTTGGGGACAAA
AAGACGTATTACCTCAGGAGTTAACACCTTATCCAAGTGATTTAAGGACAAAAATTCATGGATATGGTGGCGCTCCGCTA
ACAGCTACTCTCGATGGATCTGATCTTATATTGACTTGGGTTGACAATAAAGACAACCGCTTATGGATGAGAACTTGGTT
TTACGAGGAAGAAAAAGAAAAATCTTTTTCTTTTAAATTCATACCTAAAATAGAATCAATTTGTCTTACAAAAAAACATA
GCTATTTTCTTGCAGGTGGCGTGATTGATCTTGAAAAAAATATTTGGATTGGTTTGATGGAGGATGAAGAAGGGGATCAT
ATAGTTTCTTACTCTCTAAACAAATCTGAACAATATCCAAAAATTATTTATTCATCTCAGGGATTATTAGGTTATCTTGC
TCTCAATTCTAAAGATAGAAAATTAGCATGGGTCGAATGGAAAAATACTTCAATGCCTTGGGATTTAAATGAATTAAAAC
TTGCTAAATTAGGTGAGAAAGAAAATATAATTAATGTAGTAACTGTGAATAATGAATATTTAAAATGCACAGAAAAAATA
TCATTTTTTAATCCTATTTGGTCCGATACAGGTGATCTTTTTGTCGCTGAAGATAGTAGTGGCTGGTGGAATATAACGCA
GATAAAAACTGACTTAAATAATAATTCAATTACTATTTTCCAGAATCAATGGACTATTAAGGCTGAAATTGCTTTCCCAC
AATGGGTCCTCGGGATGTCGAGCTTTTCATGTGTGGGGGATAATGTCGTTGGGGCTTTTGCTCAGGAAGGAATTTGGACT
TTAGCTCTATTTCAAAAAGATGGATCTATCAAGACTTTTGATCAGACTTTTATTGAATTCTCAGGTATTCATTCGCATCA
AAATCGACTTGTTGCAATTGCCAGTAGTGCAGAAATTACTGAAGGGATTTTTGAAATAGATTTATTGAATCAAAGTTGGG
AACATACTCCTGCCTCTTCATTTAGCTTGGATCCAAAGGAAATAAGTATTGGCGAATCTTTTTGGTTTATTGGATCGAAT
GAAGAGAAAGTACATGCTTGGTATTACCCTCCTCTGAATAAACAAATATTGTTACCTCCTTTGTTGGTGAAAAGTCATAG
CGGACCTACTGGTATGGCTCGTTGTGGATTGGATCTTGAGGTGCAATTTTGGACATCAAGAGGTTGGGCGGTCGTAGACG
TTAATTATGGAGGCTCTTCTGGTTTTGGTAGGGAATATAGAGATCGATTAAGAGGTAATTGGGGAGTAATCGATGTTATG
GATTGCACTAAGGCAGCTCAGTCTTTGATTGCATCTGGTAAGGCTGACAAGGACCGTATAGCAATTATGGGGAGCAGCGC
ATCGGGTTTTACAGCTTTAGGTTGTTTGATATCTTCTGACATTTTTAATATTGGTGCATGTAAATATGCTGTGACTGATT
TGATTGGTATGGCTAATTCAACGCATAGGTTTGAGGAATTTTATTTAGATTATTTAATAGGAAACATAGAAACTGATTAT
GAGAAATATCTGAAAAGATCGCCAATTGAAAATGTCAATTTTATGAATATGCCATTGATTTTGTTTCATGGTTTAAAAGA
TAAAGTTATACCCTCTGATCAATCTATTGCGATTAAAGATGAATTGTTAAAGCGTGAAATTCCTGTGCAAATCAATTTAT
TTGAGAACGAAGGTCATGGATTTAAAGACGGTAAAATCAAAGTTGATGTATTAAACAAAACAGAGGCTTTTTTTAGACAA
TATCTAAATATTTAA

Upstream 100 bases:

>100_bases
TGAGCAAAACTGCCAGCCAAAGGAGTCTTAAGACAACAACTTTTATACTTTACTTTGTTTTAAGTTCAATGAGTGCATTA
ATCATTGACTCTCAACATCA

Downstream 100 bases:

>100_bases
GAATTTTTCTTTAAAAAAGAAATTACTGATTTTAGTTCTTCAGCAAGATAATCAATTTCAGATGGAGTAGATGTAAAGCT
CAAGCTTGCTCTAGCTGTGC

Product: esterase/lipase/thioesterase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 644; Mature: 644

Protein sequence:

>644_residues
MKNKTMRILDAEKVYGEAPIFKEPRIIGDWILWLEQRPNEKGRTTALIRPWGQKDVLPQELTPYPSDLRTKIHGYGGAPL
TATLDGSDLILTWVDNKDNRLWMRTWFYEEEKEKSFSFKFIPKIESICLTKKHSYFLAGGVIDLEKNIWIGLMEDEEGDH
IVSYSLNKSEQYPKIIYSSQGLLGYLALNSKDRKLAWVEWKNTSMPWDLNELKLAKLGEKENIINVVTVNNEYLKCTEKI
SFFNPIWSDTGDLFVAEDSSGWWNITQIKTDLNNNSITIFQNQWTIKAEIAFPQWVLGMSSFSCVGDNVVGAFAQEGIWT
LALFQKDGSIKTFDQTFIEFSGIHSHQNRLVAIASSAEITEGIFEIDLLNQSWEHTPASSFSLDPKEISIGESFWFIGSN
EEKVHAWYYPPLNKQILLPPLLVKSHSGPTGMARCGLDLEVQFWTSRGWAVVDVNYGGSSGFGREYRDRLRGNWGVIDVM
DCTKAAQSLIASGKADKDRIAIMGSSASGFTALGCLISSDIFNIGACKYAVTDLIGMANSTHRFEEFYLDYLIGNIETDY
EKYLKRSPIENVNFMNMPLILFHGLKDKVIPSDQSIAIKDELLKREIPVQINLFENEGHGFKDGKIKVDVLNKTEAFFRQ
YLNI

Sequences:

>Translated_644_residues
MKNKTMRILDAEKVYGEAPIFKEPRIIGDWILWLEQRPNEKGRTTALIRPWGQKDVLPQELTPYPSDLRTKIHGYGGAPL
TATLDGSDLILTWVDNKDNRLWMRTWFYEEEKEKSFSFKFIPKIESICLTKKHSYFLAGGVIDLEKNIWIGLMEDEEGDH
IVSYSLNKSEQYPKIIYSSQGLLGYLALNSKDRKLAWVEWKNTSMPWDLNELKLAKLGEKENIINVVTVNNEYLKCTEKI
SFFNPIWSDTGDLFVAEDSSGWWNITQIKTDLNNNSITIFQNQWTIKAEIAFPQWVLGMSSFSCVGDNVVGAFAQEGIWT
LALFQKDGSIKTFDQTFIEFSGIHSHQNRLVAIASSAEITEGIFEIDLLNQSWEHTPASSFSLDPKEISIGESFWFIGSN
EEKVHAWYYPPLNKQILLPPLLVKSHSGPTGMARCGLDLEVQFWTSRGWAVVDVNYGGSSGFGREYRDRLRGNWGVIDVM
DCTKAAQSLIASGKADKDRIAIMGSSASGFTALGCLISSDIFNIGACKYAVTDLIGMANSTHRFEEFYLDYLIGNIETDY
EKYLKRSPIENVNFMNMPLILFHGLKDKVIPSDQSIAIKDELLKREIPVQINLFENEGHGFKDGKIKVDVLNKTEAFFRQ
YLNI
>Mature_644_residues
MKNKTMRILDAEKVYGEAPIFKEPRIIGDWILWLEQRPNEKGRTTALIRPWGQKDVLPQELTPYPSDLRTKIHGYGGAPL
TATLDGSDLILTWVDNKDNRLWMRTWFYEEEKEKSFSFKFIPKIESICLTKKHSYFLAGGVIDLEKNIWIGLMEDEEGDH
IVSYSLNKSEQYPKIIYSSQGLLGYLALNSKDRKLAWVEWKNTSMPWDLNELKLAKLGEKENIINVVTVNNEYLKCTEKI
SFFNPIWSDTGDLFVAEDSSGWWNITQIKTDLNNNSITIFQNQWTIKAEIAFPQWVLGMSSFSCVGDNVVGAFAQEGIWT
LALFQKDGSIKTFDQTFIEFSGIHSHQNRLVAIASSAEITEGIFEIDLLNQSWEHTPASSFSLDPKEISIGESFWFIGSN
EEKVHAWYYPPLNKQILLPPLLVKSHSGPTGMARCGLDLEVQFWTSRGWAVVDVNYGGSSGFGREYRDRLRGNWGVIDVM
DCTKAAQSLIASGKADKDRIAIMGSSASGFTALGCLISSDIFNIGACKYAVTDLIGMANSTHRFEEFYLDYLIGNIETDY
EKYLKRSPIENVNFMNMPLILFHGLKDKVIPSDQSIAIKDELLKREIPVQINLFENEGHGFKDGKIKVDVLNKTEAFFRQ
YLNI

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI23510451, Length=245, Percent_Identity=26.9387755102041, Blast_Score=82, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17552908, Length=589, Percent_Identity=29.5415959252971, Blast_Score=236, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI25144540, Length=229, Percent_Identity=25.3275109170306, Blast_Score=89, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25144537, Length=229, Percent_Identity=25.3275109170306, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25149159, Length=224, Percent_Identity=25.4464285714286, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 73272; Mature: 73272

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKTMRILDAEKVYGEAPIFKEPRIIGDWILWLEQRPNEKGRTTALIRPWGQKDVLPQE
CCCCEEEEEEHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCHH
LTPYPSDLRTKIHGYGGAPLTATLDGSDLILTWVDNKDNRLWMRTWFYEEEKEKSFSFKF
CCCCCHHHHHEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEE
IPKIESICLTKKHSYFLAGGVIDLEKNIWIGLMEDEEGDHIVSYSLNKSEQYPKIIYSSQ
CCCHHHEEEECCCCEEEECCEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEECC
GLLGYLALNSKDRKLAWVEWKNTSMPWDLNELKLAKLGEKENIINVVTVNNEYLKCTEKI
CEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEEEECCHHEEHHHHH
SFFNPIWSDTGDLFVAEDSSGWWNITQIKTDLNNNSITIFQNQWTIKAEIAFPQWVLGMS
HHCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEEEECCEEEEEEECCCHHHHCCC
SFSCVGDNVVGAFAQEGIWTLALFQKDGSIKTFDQTFIEFSGIHSHQNRLVAIASSAEIT
CCCCCCCHHHHHHHHCCEEEEEEEECCCCEEEHHHHHHHHCCCCCCCCEEEEEECCCCHH
EGIFEIDLLNQSWEHTPASSFSLDPKEISIGESFWFIGSNEEKVHAWYYPPLNKQILLPP
CCEEEEEEECCCCCCCCCCCCCCCHHHEECCCEEEEEECCCCEEEEEECCCCCCCEECCC
LLVKSHSGPTGMARCGLDLEVQFWTSRGWAVVDVNYGGSSGFGREYRDRLRGNWGVIDVM
EEEECCCCCCCHHHCCCEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHCCCCCEEEHH
DCTKAAQSLIASGKADKDRIAIMGSSASGFTALGCLISSDIFNIGACKYAVTDLIGMANS
HHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCHHCCCHHHHHHHHHHHCCCC
THRFEEFYLDYLIGNIETDYEKYLKRSPIENVNFMNMPLILFHGLKDKVIPSDQSIAIKD
CHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEHH
ELLKREIPVQINLFENEGHGFKDGKIKVDVLNKTEAFFRQYLNI
HHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCHHHHHHHHHCC
>Mature Secondary Structure
MKNKTMRILDAEKVYGEAPIFKEPRIIGDWILWLEQRPNEKGRTTALIRPWGQKDVLPQE
CCCCEEEEEEHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCHH
LTPYPSDLRTKIHGYGGAPLTATLDGSDLILTWVDNKDNRLWMRTWFYEEEKEKSFSFKF
CCCCCHHHHHEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEE
IPKIESICLTKKHSYFLAGGVIDLEKNIWIGLMEDEEGDHIVSYSLNKSEQYPKIIYSSQ
CCCHHHEEEECCCCEEEECCEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEECC
GLLGYLALNSKDRKLAWVEWKNTSMPWDLNELKLAKLGEKENIINVVTVNNEYLKCTEKI
CEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEEEECCHHEEHHHHH
SFFNPIWSDTGDLFVAEDSSGWWNITQIKTDLNNNSITIFQNQWTIKAEIAFPQWVLGMS
HHCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEEEECCEEEEEEECCCHHHHCCC
SFSCVGDNVVGAFAQEGIWTLALFQKDGSIKTFDQTFIEFSGIHSHQNRLVAIASSAEIT
CCCCCCCHHHHHHHHCCEEEEEEEECCCCEEEHHHHHHHHCCCCCCCCEEEEEECCCCHH
EGIFEIDLLNQSWEHTPASSFSLDPKEISIGESFWFIGSNEEKVHAWYYPPLNKQILLPP
CCEEEEEEECCCCCCCCCCCCCCCHHHEECCCEEEEEECCCCEEEEEECCCCCCCEECCC
LLVKSHSGPTGMARCGLDLEVQFWTSRGWAVVDVNYGGSSGFGREYRDRLRGNWGVIDVM
EEEECCCCCCCHHHCCCEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHCCCCCEEEHH
DCTKAAQSLIASGKADKDRIAIMGSSASGFTALGCLISSDIFNIGACKYAVTDLIGMANS
HHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCHHCCCHHHHHHHHHHHCCCC
THRFEEFYLDYLIGNIETDYEKYLKRSPIENVNFMNMPLILFHGLKDKVIPSDQSIAIKD
CHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEHH
ELLKREIPVQINLFENEGHGFKDGKIKVDVLNKTEAFFRQYLNI
HHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]