| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is dap2 [H]
Identifier: 124024846
GI number: 124024846
Start: 128762
End: 130696
Strand: Direct
Name: dap2 [H]
Synonym: NATL1_01331
Alternate gene names: 124024846
Gene position: 128762-130696 (Clockwise)
Preceding gene: 124024840
Following gene: 124024851
Centisome position: 6.91
GC content: 34.68
Gene sequence:
>1935_bases ATGAAGAACAAAACAATGAGAATCTTGGATGCTGAAAAAGTTTATGGAGAAGCCCCCATATTTAAAGAGCCTCGTATAAT AGGTGATTGGATTTTATGGTTAGAACAAAGACCAAACGAAAAGGGAAGAACTACAGCTTTAATCAGACCTTGGGGACAAA AAGACGTATTACCTCAGGAGTTAACACCTTATCCAAGTGATTTAAGGACAAAAATTCATGGATATGGTGGCGCTCCGCTA ACAGCTACTCTCGATGGATCTGATCTTATATTGACTTGGGTTGACAATAAAGACAACCGCTTATGGATGAGAACTTGGTT TTACGAGGAAGAAAAAGAAAAATCTTTTTCTTTTAAATTCATACCTAAAATAGAATCAATTTGTCTTACAAAAAAACATA GCTATTTTCTTGCAGGTGGCGTGATTGATCTTGAAAAAAATATTTGGATTGGTTTGATGGAGGATGAAGAAGGGGATCAT ATAGTTTCTTACTCTCTAAACAAATCTGAACAATATCCAAAAATTATTTATTCATCTCAGGGATTATTAGGTTATCTTGC TCTCAATTCTAAAGATAGAAAATTAGCATGGGTCGAATGGAAAAATACTTCAATGCCTTGGGATTTAAATGAATTAAAAC TTGCTAAATTAGGTGAGAAAGAAAATATAATTAATGTAGTAACTGTGAATAATGAATATTTAAAATGCACAGAAAAAATA TCATTTTTTAATCCTATTTGGTCCGATACAGGTGATCTTTTTGTCGCTGAAGATAGTAGTGGCTGGTGGAATATAACGCA GATAAAAACTGACTTAAATAATAATTCAATTACTATTTTCCAGAATCAATGGACTATTAAGGCTGAAATTGCTTTCCCAC AATGGGTCCTCGGGATGTCGAGCTTTTCATGTGTGGGGGATAATGTCGTTGGGGCTTTTGCTCAGGAAGGAATTTGGACT TTAGCTCTATTTCAAAAAGATGGATCTATCAAGACTTTTGATCAGACTTTTATTGAATTCTCAGGTATTCATTCGCATCA AAATCGACTTGTTGCAATTGCCAGTAGTGCAGAAATTACTGAAGGGATTTTTGAAATAGATTTATTGAATCAAAGTTGGG AACATACTCCTGCCTCTTCATTTAGCTTGGATCCAAAGGAAATAAGTATTGGCGAATCTTTTTGGTTTATTGGATCGAAT GAAGAGAAAGTACATGCTTGGTATTACCCTCCTCTGAATAAACAAATATTGTTACCTCCTTTGTTGGTGAAAAGTCATAG CGGACCTACTGGTATGGCTCGTTGTGGATTGGATCTTGAGGTGCAATTTTGGACATCAAGAGGTTGGGCGGTCGTAGACG TTAATTATGGAGGCTCTTCTGGTTTTGGTAGGGAATATAGAGATCGATTAAGAGGTAATTGGGGAGTAATCGATGTTATG GATTGCACTAAGGCAGCTCAGTCTTTGATTGCATCTGGTAAGGCTGACAAGGACCGTATAGCAATTATGGGGAGCAGCGC ATCGGGTTTTACAGCTTTAGGTTGTTTGATATCTTCTGACATTTTTAATATTGGTGCATGTAAATATGCTGTGACTGATT TGATTGGTATGGCTAATTCAACGCATAGGTTTGAGGAATTTTATTTAGATTATTTAATAGGAAACATAGAAACTGATTAT GAGAAATATCTGAAAAGATCGCCAATTGAAAATGTCAATTTTATGAATATGCCATTGATTTTGTTTCATGGTTTAAAAGA TAAAGTTATACCCTCTGATCAATCTATTGCGATTAAAGATGAATTGTTAAAGCGTGAAATTCCTGTGCAAATCAATTTAT TTGAGAACGAAGGTCATGGATTTAAAGACGGTAAAATCAAAGTTGATGTATTAAACAAAACAGAGGCTTTTTTTAGACAA TATCTAAATATTTAA
Upstream 100 bases:
>100_bases TGAGCAAAACTGCCAGCCAAAGGAGTCTTAAGACAACAACTTTTATACTTTACTTTGTTTTAAGTTCAATGAGTGCATTA ATCATTGACTCTCAACATCA
Downstream 100 bases:
>100_bases GAATTTTTCTTTAAAAAAGAAATTACTGATTTTAGTTCTTCAGCAAGATAATCAATTTCAGATGGAGTAGATGTAAAGCT CAAGCTTGCTCTAGCTGTGC
Product: esterase/lipase/thioesterase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 644; Mature: 644
Protein sequence:
>644_residues MKNKTMRILDAEKVYGEAPIFKEPRIIGDWILWLEQRPNEKGRTTALIRPWGQKDVLPQELTPYPSDLRTKIHGYGGAPL TATLDGSDLILTWVDNKDNRLWMRTWFYEEEKEKSFSFKFIPKIESICLTKKHSYFLAGGVIDLEKNIWIGLMEDEEGDH IVSYSLNKSEQYPKIIYSSQGLLGYLALNSKDRKLAWVEWKNTSMPWDLNELKLAKLGEKENIINVVTVNNEYLKCTEKI SFFNPIWSDTGDLFVAEDSSGWWNITQIKTDLNNNSITIFQNQWTIKAEIAFPQWVLGMSSFSCVGDNVVGAFAQEGIWT LALFQKDGSIKTFDQTFIEFSGIHSHQNRLVAIASSAEITEGIFEIDLLNQSWEHTPASSFSLDPKEISIGESFWFIGSN EEKVHAWYYPPLNKQILLPPLLVKSHSGPTGMARCGLDLEVQFWTSRGWAVVDVNYGGSSGFGREYRDRLRGNWGVIDVM DCTKAAQSLIASGKADKDRIAIMGSSASGFTALGCLISSDIFNIGACKYAVTDLIGMANSTHRFEEFYLDYLIGNIETDY EKYLKRSPIENVNFMNMPLILFHGLKDKVIPSDQSIAIKDELLKREIPVQINLFENEGHGFKDGKIKVDVLNKTEAFFRQ YLNI
Sequences:
>Translated_644_residues MKNKTMRILDAEKVYGEAPIFKEPRIIGDWILWLEQRPNEKGRTTALIRPWGQKDVLPQELTPYPSDLRTKIHGYGGAPL TATLDGSDLILTWVDNKDNRLWMRTWFYEEEKEKSFSFKFIPKIESICLTKKHSYFLAGGVIDLEKNIWIGLMEDEEGDH IVSYSLNKSEQYPKIIYSSQGLLGYLALNSKDRKLAWVEWKNTSMPWDLNELKLAKLGEKENIINVVTVNNEYLKCTEKI SFFNPIWSDTGDLFVAEDSSGWWNITQIKTDLNNNSITIFQNQWTIKAEIAFPQWVLGMSSFSCVGDNVVGAFAQEGIWT LALFQKDGSIKTFDQTFIEFSGIHSHQNRLVAIASSAEITEGIFEIDLLNQSWEHTPASSFSLDPKEISIGESFWFIGSN EEKVHAWYYPPLNKQILLPPLLVKSHSGPTGMARCGLDLEVQFWTSRGWAVVDVNYGGSSGFGREYRDRLRGNWGVIDVM DCTKAAQSLIASGKADKDRIAIMGSSASGFTALGCLISSDIFNIGACKYAVTDLIGMANSTHRFEEFYLDYLIGNIETDY EKYLKRSPIENVNFMNMPLILFHGLKDKVIPSDQSIAIKDELLKREIPVQINLFENEGHGFKDGKIKVDVLNKTEAFFRQ YLNI >Mature_644_residues MKNKTMRILDAEKVYGEAPIFKEPRIIGDWILWLEQRPNEKGRTTALIRPWGQKDVLPQELTPYPSDLRTKIHGYGGAPL TATLDGSDLILTWVDNKDNRLWMRTWFYEEEKEKSFSFKFIPKIESICLTKKHSYFLAGGVIDLEKNIWIGLMEDEEGDH IVSYSLNKSEQYPKIIYSSQGLLGYLALNSKDRKLAWVEWKNTSMPWDLNELKLAKLGEKENIINVVTVNNEYLKCTEKI SFFNPIWSDTGDLFVAEDSSGWWNITQIKTDLNNNSITIFQNQWTIKAEIAFPQWVLGMSSFSCVGDNVVGAFAQEGIWT LALFQKDGSIKTFDQTFIEFSGIHSHQNRLVAIASSAEITEGIFEIDLLNQSWEHTPASSFSLDPKEISIGESFWFIGSN EEKVHAWYYPPLNKQILLPPLLVKSHSGPTGMARCGLDLEVQFWTSRGWAVVDVNYGGSSGFGREYRDRLRGNWGVIDVM DCTKAAQSLIASGKADKDRIAIMGSSASGFTALGCLISSDIFNIGACKYAVTDLIGMANSTHRFEEFYLDYLIGNIETDY EKYLKRSPIENVNFMNMPLILFHGLKDKVIPSDQSIAIKDELLKREIPVQINLFENEGHGFKDGKIKVDVLNKTEAFFRQ YLNI
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI23510451, Length=245, Percent_Identity=26.9387755102041, Blast_Score=82, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17552908, Length=589, Percent_Identity=29.5415959252971, Blast_Score=236, Evalue=4e-62, Organism=Caenorhabditis elegans, GI25144540, Length=229, Percent_Identity=25.3275109170306, Blast_Score=89, Evalue=1e-17, Organism=Caenorhabditis elegans, GI25144537, Length=229, Percent_Identity=25.3275109170306, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI25149159, Length=224, Percent_Identity=25.4464285714286, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 73272; Mature: 73272
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKTMRILDAEKVYGEAPIFKEPRIIGDWILWLEQRPNEKGRTTALIRPWGQKDVLPQE CCCCEEEEEEHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCHH LTPYPSDLRTKIHGYGGAPLTATLDGSDLILTWVDNKDNRLWMRTWFYEEEKEKSFSFKF CCCCCHHHHHEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEE IPKIESICLTKKHSYFLAGGVIDLEKNIWIGLMEDEEGDHIVSYSLNKSEQYPKIIYSSQ CCCHHHEEEECCCCEEEECCEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEECC GLLGYLALNSKDRKLAWVEWKNTSMPWDLNELKLAKLGEKENIINVVTVNNEYLKCTEKI CEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEEEECCHHEEHHHHH SFFNPIWSDTGDLFVAEDSSGWWNITQIKTDLNNNSITIFQNQWTIKAEIAFPQWVLGMS HHCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEEEECCEEEEEEECCCHHHHCCC SFSCVGDNVVGAFAQEGIWTLALFQKDGSIKTFDQTFIEFSGIHSHQNRLVAIASSAEIT CCCCCCCHHHHHHHHCCEEEEEEEECCCCEEEHHHHHHHHCCCCCCCCEEEEEECCCCHH EGIFEIDLLNQSWEHTPASSFSLDPKEISIGESFWFIGSNEEKVHAWYYPPLNKQILLPP CCEEEEEEECCCCCCCCCCCCCCCHHHEECCCEEEEEECCCCEEEEEECCCCCCCEECCC LLVKSHSGPTGMARCGLDLEVQFWTSRGWAVVDVNYGGSSGFGREYRDRLRGNWGVIDVM EEEECCCCCCCHHHCCCEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHCCCCCEEEHH DCTKAAQSLIASGKADKDRIAIMGSSASGFTALGCLISSDIFNIGACKYAVTDLIGMANS HHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCHHCCCHHHHHHHHHHHCCCC THRFEEFYLDYLIGNIETDYEKYLKRSPIENVNFMNMPLILFHGLKDKVIPSDQSIAIKD CHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEHH ELLKREIPVQINLFENEGHGFKDGKIKVDVLNKTEAFFRQYLNI HHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCHHHHHHHHHCC >Mature Secondary Structure MKNKTMRILDAEKVYGEAPIFKEPRIIGDWILWLEQRPNEKGRTTALIRPWGQKDVLPQE CCCCEEEEEEHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCHH LTPYPSDLRTKIHGYGGAPLTATLDGSDLILTWVDNKDNRLWMRTWFYEEEKEKSFSFKF CCCCCHHHHHEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEE IPKIESICLTKKHSYFLAGGVIDLEKNIWIGLMEDEEGDHIVSYSLNKSEQYPKIIYSSQ CCCHHHEEEECCCCEEEECCEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEECC GLLGYLALNSKDRKLAWVEWKNTSMPWDLNELKLAKLGEKENIINVVTVNNEYLKCTEKI CEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEEEECCHHEEHHHHH SFFNPIWSDTGDLFVAEDSSGWWNITQIKTDLNNNSITIFQNQWTIKAEIAFPQWVLGMS HHCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEEEECCEEEEEEECCCHHHHCCC SFSCVGDNVVGAFAQEGIWTLALFQKDGSIKTFDQTFIEFSGIHSHQNRLVAIASSAEIT CCCCCCCHHHHHHHHCCEEEEEEEECCCCEEEHHHHHHHHCCCCCCCCEEEEEECCCCHH EGIFEIDLLNQSWEHTPASSFSLDPKEISIGESFWFIGSNEEKVHAWYYPPLNKQILLPP CCEEEEEEECCCCCCCCCCCCCCCHHHEECCCEEEEEECCCCEEEEEECCCCCCCEECCC LLVKSHSGPTGMARCGLDLEVQFWTSRGWAVVDVNYGGSSGFGREYRDRLRGNWGVIDVM EEEECCCCCCCHHHCCCEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHCCCCCEEEHH DCTKAAQSLIASGKADKDRIAIMGSSASGFTALGCLISSDIFNIGACKYAVTDLIGMANS HHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCHHCCCHHHHHHHHHHHCCCC THRFEEFYLDYLIGNIETDYEKYLKRSPIENVNFMNMPLILFHGLKDKVIPSDQSIAIKD CHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEHH ELLKREIPVQINLFENEGHGFKDGKIKVDVLNKTEAFFRQYLNI HHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]