| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is cynS
Identifier: 124024783
GI number: 124024783
Start: 75407
End: 75850
Strand: Reverse
Name: cynS
Synonym: NATL1_00701
Alternate gene names: 124024783
Gene position: 75850-75407 (Counterclockwise)
Preceding gene: 124024784
Following gene: 124024782
Centisome position: 4.07
GC content: 35.59
Gene sequence:
>444_bases ATGTCATTTCCTGAATCAACTCAATTATTATTAAAAGCAAAAAAAGAAAAAGGATTAACCTTTGCAGATATTGGAATTCT ACTAGGACTAGATGAAGTCTGGGTTGCTAGTCTTTTTTATGGACAATCAACTGCCAGTGATGAAGAGGCTGATAAATTAT TAACTACTTTAGGACTTGGTACGGAACATAAAGAGATATTGACAACTCCACCCGTAAAAGGATCACTAGATCCAGTAATT CCCACCGATCCATTGATATATCGTTTTTATGAAATCATGCAAGTTTATGGCATGCCAATGAAAGACGTGATTCAAGAAAA GTTTGGTGATGGGATCATGAGTGCAATAGATTTTACAATCAATGTAGATAAAGTCGAAGATCCGAAAGGTGACAGAGTGA AGGTTTCAATGTGTGGGAAGTTTTTACCCTACAAGAAATGGTAA
Upstream 100 bases:
>100_bases CTAACTGAAACAATCAAGATTTAATCGTATTAGTTAATTACCTATCTAATGAATATCTCTCGTTAGATATACCTCTCTTT ACGTTGTTAAATTTGTTTCT
Downstream 100 bases:
>100_bases AGATTAATTCCTTTCTTTATGTTCAAGTGGTATAAAAGTGGTATATTTGAAAAAGTAATCCCTCAAATCCATTCCGGTGG AAAAGATCTTAGGTCAAGTG
Product: cyanate hydratase
Products: NA
Alternate protein names: Cyanase; Cyanate hydrolase; Cyanate lyase
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSFPESTQLLLKAKKEKGLTFADIGILLGLDEVWVASLFYGQSTASDEEADKLLTTLGLGTEHKEILTTPPVKGSLDPVI PTDPLIYRFYEIMQVYGMPMKDVIQEKFGDGIMSAIDFTINVDKVEDPKGDRVKVSMCGKFLPYKKW
Sequences:
>Translated_147_residues MSFPESTQLLLKAKKEKGLTFADIGILLGLDEVWVASLFYGQSTASDEEADKLLTTLGLGTEHKEILTTPPVKGSLDPVI PTDPLIYRFYEIMQVYGMPMKDVIQEKFGDGIMSAIDFTINVDKVEDPKGDRVKVSMCGKFLPYKKW >Mature_146_residues SFPESTQLLLKAKKEKGLTFADIGILLGLDEVWVASLFYGQSTASDEEADKLLTTLGLGTEHKEILTTPPVKGSLDPVIP TDPLIYRFYEIMQVYGMPMKDVIQEKFGDGIMSAIDFTINVDKVEDPKGDRVKVSMCGKFLPYKKW
Specific function: Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
COG id: COG1513
COG function: function code P; Cyanate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyanase family
Homologues:
Organism=Escherichia coli, GI1786535, Length=140, Percent_Identity=43.5714285714286, Blast_Score=111, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYNS_PROM1 (A2BZH4)
Other databases:
- EMBL: CP000553 - RefSeq: YP_001013899.1 - ProteinModelPortal: A2BZH4 - SMR: A2BZH4 - STRING: A2BZH4 - GeneID: 4779099 - GenomeReviews: CP000553_GR - KEGG: pme:NATL1_00701 - eggNOG: COG1513 - HOGENOM: HBG317643 - OMA: QTIPLRG - ProtClustDB: PRK02866 - BioCyc: PMAR167555:NATL1_00701-MONOMER - HAMAP: MF_00535 - InterPro: IPR008076 - InterPro: IPR003712 - InterPro: IPR010982 - Gene3D: G3DSA:3.30.1160.10 - PIRSF: PIRSF001263 - PRINTS: PR01693 - TIGRFAMs: TIGR00673
Pfam domain/function: PF02560 Cyanate_lyase; SSF55234 Cyanate_lyase_C; SSF47413 Lambda_like_DNA
EC number: =4.2.1.104
Molecular weight: Translated: 16424; Mature: 16293
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: ACT_SITE 88-88 ACT_SITE 91-91 ACT_SITE 114-114
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPESTQLLLKAKKEKGLTFADIGILLGLDEVWVASLFYGQSTASDEEADKLLTTLGLG CCCCHHHHHHHHHHHHCCCEEEHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC TEHKEILTTPPVKGSLDPVIPTDPLIYRFYEIMQVYGMPMKDVIQEKFGDGIMSAIDFTI CCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHEE NVDKVEDPKGDRVKVSMCGKFLPYKKW ECCCCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure SFPESTQLLLKAKKEKGLTFADIGILLGLDEVWVASLFYGQSTASDEEADKLLTTLGLG CCCHHHHHHHHHHHHCCCEEEHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC TEHKEILTTPPVKGSLDPVIPTDPLIYRFYEIMQVYGMPMKDVIQEKFGDGIMSAIDFTI CCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHEE NVDKVEDPKGDRVKVSMCGKFLPYKKW ECCCCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA