| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024768
Identifier: 124024768
GI number: 124024768
Start: 57261
End: 57785
Strand: Reverse
Name: 124024768
Synonym: NATL1_00551
Alternate gene names: NA
Gene position: 57785-57261 (Counterclockwise)
Preceding gene: 124024769
Following gene: 124024764
Centisome position: 3.1
GC content: 35.81
Gene sequence:
>525_bases ATGTCTAATAAAAAGCTTCTTGTTATAACTGCTAGTAATGGTGAAAATCTCAAATTAGCGAAAAGATTTCTAGTCGCAGG CAAAGAACTAAATTACTCATGCGAATTACTTGATTTGACAGAATCAAAAAATGATTTGCCTATATTTAATCCACGTAATA ATTCAAAAGACAAAGCACCAGAAAATCTAAAGTCAATCAATACTGAAATGGAGAGCCACTCACACTGGGTCATTTGTGCA CCAGAATATAACGGCTCAATCCCTCCAATTCTTACAAATGCAATAGCTTGGCTGTCTGTGCAAGGAACAGATTTTCGAAG TTTATTCAACGAACGCCCAATTGCAATTGCAAGTTTTTCAGGAGGAGGATGTATGGAGTTATTACTTTCGATGCGAATTC AATTGACCCACCTTGGGGCTTTAGTCTTAGGTCGTCAATTAGCTACGAATAAATCAAAAGTTGCTGAGGATAAATCAATC AACGCCATTCTAAATCAACTACTACAACTAAATCATCCTAATTAA
Upstream 100 bases:
>100_bases AAGATGGAGTAACAGCAGTTCATCATCGAAAAACCGGAGCGAACTACTAGATCCATTACAAAAATGACATCATCCATTTA CACTTCACTGTTAATTCACA
Downstream 100 bases:
>100_bases TTCAATATCTAATCTTTACTTCTAATTAACTCATTTTTAGATTTTTGCTCATACCAAGCCCGTAGCACTTTTCTTGCCAT AGGTAGAGCATGTACTGAAC
Product: putative reductase
Products: NA
Alternate protein names: Flavoprotein; NADPH-Dependent FMN Reductase; Oxidoreductase; FMN Reductase; NADPH-Dependent Fmn Reductase Domain Protein
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSNKKLLVITASNGENLKLAKRFLVAGKELNYSCELLDLTESKNDLPIFNPRNNSKDKAPENLKSINTEMESHSHWVICA PEYNGSIPPILTNAIAWLSVQGTDFRSLFNERPIAIASFSGGGCMELLLSMRIQLTHLGALVLGRQLATNKSKVAEDKSI NAILNQLLQLNHPN
Sequences:
>Translated_174_residues MSNKKLLVITASNGENLKLAKRFLVAGKELNYSCELLDLTESKNDLPIFNPRNNSKDKAPENLKSINTEMESHSHWVICA PEYNGSIPPILTNAIAWLSVQGTDFRSLFNERPIAIASFSGGGCMELLLSMRIQLTHLGALVLGRQLATNKSKVAEDKSI NAILNQLLQLNHPN >Mature_173_residues SNKKLLVITASNGENLKLAKRFLVAGKELNYSCELLDLTESKNDLPIFNPRNNSKDKAPENLKSINTEMESHSHWVICAP EYNGSIPPILTNAIAWLSVQGTDFRSLFNERPIAIASFSGGGCMELLLSMRIQLTHLGALVLGRQLATNKSKVAEDKSIN AILNQLLQLNHPN
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19211; Mature: 19080
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKKLLVITASNGENLKLAKRFLVAGKELNYSCELLDLTESKNDLPIFNPRNNSKDKAP CCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCH ENLKSINTEMESHSHWVICAPEYNGSIPPILTNAIAWLSVQGTDFRSLFNERPIAIASFS HHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHEEEEEECCCHHHHHHCCCCEEEEEEC GGGCMELLLSMRIQLTHLGALVLGRQLATNKSKVAEDKSINAILNQLLQLNHPN CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure SNKKLLVITASNGENLKLAKRFLVAGKELNYSCELLDLTESKNDLPIFNPRNNSKDKAP CCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCH ENLKSINTEMESHSHWVICAPEYNGSIPPILTNAIAWLSVQGTDFRSLFNERPIAIASFS HHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHEEEEEECCCHHHHHHCCCCEEEEEEC GGGCMELLLSMRIQLTHLGALVLGRQLATNKSKVAEDKSINAILNQLLQLNHPN CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA