| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024755
Identifier: 124024755
GI number: 124024755
Start: 43375
End: 44829
Strand: Reverse
Name: 124024755
Synonym: NATL1_00421
Alternate gene names: NA
Gene position: 44829-43375 (Counterclockwise)
Preceding gene: 124024756
Following gene: 124024753
Centisome position: 2.4
GC content: 28.11
Gene sequence:
>1455_bases ATGAAAGGTTTTGGAGAACAGCATAAATCTAAAAAGAAAAGAAATGAGACAACTACATTCCAAGTTCCATTTCCATTTCC TTTAAGAGAAAGTCAAGAAAATATTAATATTATTACTAATACTCCTTCGAAACTTTCTAAAGAACAAATAATTAATCAAG CATTAAAGTTTCATTCAAAAGGAAACATTTCAGAAGCAACAAAATATTATCAATATTTTATCAACCAAGGTTTTAAAGAT CATAGAGTTTTTTCTAATTATGGAGCAATCCTAAGAAAACAGGGGAAAGTAAAAGAATCAGGGTTTTTCATGAGAAAAGC AATTGAAATTCAACCTAATATCCCCATAATAAATTTTAACATGGGAAATATATTAAAAGATCTAGGTAAATTAAAAGAAG CGGAAATATTTATTCGTAAATCAATTAGAATGGATCCTAATCTTACAAAAGCATATCTTTCTTTATCAACTATTACATAC TCAAATATCGATAATAAAACTTGGCAGGATAATCTTTTTTCTGATTTTATATTAAAGTATAAATCACAAGTAGAGCAAGT TGAAATCTACTTCGCTAGAGCAAATATTCTTCATAAAGAAAAAAAATATAAGAAAAGTTATCAAAACTTAAAATTGGCAA ATAACTTACAACTTGCAATTAAGGCAAGTGATATTAATAAAAGAATAAAAAAGTCTCAATTATTACTTATTGAATCTGAT AAGAAGGTAGTTAATAAAAAAGAAAAGATAAATTATGCCCAGAGTATTTTTATTTTAGGGTTGCCAAGATGTGGTTCAAC ATTATTGGAATCAATTCTTAGTATGAATAAAGACGTATATGATCTAGGTGAAATTAATATTTTAGAAGAATCATTTATAG AGTATAAGAAGTTTATACAAGATATTAGTCTTGCTGAACTTTATAATGATAAAGTTAAAAACAAGACTGACTTGAATATC ACAACAAATAAATGGTTATATAACTATCAATATGCAGGTATTATCGCTCGCCATATTCCAAACGCAAAACTTATTCATTG TTTTCGACATCCTTTAGACAATATTCTTTCACTTTACCGAACACATTTTGCTAGTGGAAATGAATATTCTTCATCCTTAG TTGATTGTGCACGAGTTTATTTAGATCAGGAGAAGGTAATGAAAGAATATAAAAATAGATATAGATCAAAAATTTACGAT TTAAATTATGATTCATTAGTGAACGATCCTAATAAAGAAATTAGATCGTTAATCTCTTGGTTGGGTTGGGAATGGCAAGA TTCATTTCTATCTCCGCAACTAAATTCACGCTCAGTTTCAACAGCAAGCAATGTTCAAGTTCGTTCCCCAATTAATTCAA AATCTATTGGTGGATGGAAGAACTACAAGGACATGCTTAAACCTGCGATTGAAATACTTGCTAAAACCAATGGATATAAA AACATCGCTTCCTAA
Upstream 100 bases:
>100_bases AAAGTCACAAAGAGACAAAGCACATGACAACAAGATAATACTGTCATATTCTAGATATCTAGTATTCTAGTCTCACGCTA AGGGTCTGGAAGTTTTAAAG
Downstream 100 bases:
>100_bases AAACAAGTTACAAAACTAGGAGTAGTTTGAAGAACAACATCCCACGACCTTCGCAGTATTTATCAGTTCTGAATTTGTAA AGCGAAAATCTTACTACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MKGFGEQHKSKKKRNETTTFQVPFPFPLRESQENINIITNTPSKLSKEQIINQALKFHSKGNISEATKYYQYFINQGFKD HRVFSNYGAILRKQGKVKESGFFMRKAIEIQPNIPIINFNMGNILKDLGKLKEAEIFIRKSIRMDPNLTKAYLSLSTITY SNIDNKTWQDNLFSDFILKYKSQVEQVEIYFARANILHKEKKYKKSYQNLKLANNLQLAIKASDINKRIKKSQLLLIESD KKVVNKKEKINYAQSIFILGLPRCGSTLLESILSMNKDVYDLGEINILEESFIEYKKFIQDISLAELYNDKVKNKTDLNI TTNKWLYNYQYAGIIARHIPNAKLIHCFRHPLDNILSLYRTHFASGNEYSSSLVDCARVYLDQEKVMKEYKNRYRSKIYD LNYDSLVNDPNKEIRSLISWLGWEWQDSFLSPQLNSRSVSTASNVQVRSPINSKSIGGWKNYKDMLKPAIEILAKTNGYK NIAS
Sequences:
>Translated_484_residues MKGFGEQHKSKKKRNETTTFQVPFPFPLRESQENINIITNTPSKLSKEQIINQALKFHSKGNISEATKYYQYFINQGFKD HRVFSNYGAILRKQGKVKESGFFMRKAIEIQPNIPIINFNMGNILKDLGKLKEAEIFIRKSIRMDPNLTKAYLSLSTITY SNIDNKTWQDNLFSDFILKYKSQVEQVEIYFARANILHKEKKYKKSYQNLKLANNLQLAIKASDINKRIKKSQLLLIESD KKVVNKKEKINYAQSIFILGLPRCGSTLLESILSMNKDVYDLGEINILEESFIEYKKFIQDISLAELYNDKVKNKTDLNI TTNKWLYNYQYAGIIARHIPNAKLIHCFRHPLDNILSLYRTHFASGNEYSSSLVDCARVYLDQEKVMKEYKNRYRSKIYD LNYDSLVNDPNKEIRSLISWLGWEWQDSFLSPQLNSRSVSTASNVQVRSPINSKSIGGWKNYKDMLKPAIEILAKTNGYK NIAS >Mature_484_residues MKGFGEQHKSKKKRNETTTFQVPFPFPLRESQENINIITNTPSKLSKEQIINQALKFHSKGNISEATKYYQYFINQGFKD HRVFSNYGAILRKQGKVKESGFFMRKAIEIQPNIPIINFNMGNILKDLGKLKEAEIFIRKSIRMDPNLTKAYLSLSTITY SNIDNKTWQDNLFSDFILKYKSQVEQVEIYFARANILHKEKKYKKSYQNLKLANNLQLAIKASDINKRIKKSQLLLIESD KKVVNKKEKINYAQSIFILGLPRCGSTLLESILSMNKDVYDLGEINILEESFIEYKKFIQDISLAELYNDKVKNKTDLNI TTNKWLYNYQYAGIIARHIPNAKLIHCFRHPLDNILSLYRTHFASGNEYSSSLVDCARVYLDQEKVMKEYKNRYRSKIYD LNYDSLVNDPNKEIRSLISWLGWEWQDSFLSPQLNSRSVSTASNVQVRSPINSKSIGGWKNYKDMLKPAIEILAKTNGYK NIAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 8 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 - InterPro: IPR001440 - InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00685 Sulfotransfer_1; PF00515 TPR_1; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 56332; Mature: 56332
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGFGEQHKSKKKRNETTTFQVPFPFPLRESQENINIITNTPSKLSKEQIINQALKFHSK CCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCC GNISEATKYYQYFINQGFKDHRVFSNYGAILRKQGKVKESGFFMRKAIEIQPNIPIINFN CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHEEEECCCCCEEECC MGNILKDLGKLKEAEIFIRKSIRMDPNLTKAYLSLSTITYSNIDNKTWQDNLFSDFILKY HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHH KSQVEQVEIYFARANILHKEKKYKKSYQNLKLANNLQLAIKASDINKRIKKSQLLLIESD HHHHHHHHEEEHHHHHHHHHHHHHHHHHHCEECCCEEEEEEECHHHHHHHHCEEEEEECC KKVVNKKEKINYAQSIFILGLPRCGSTLLESILSMNKDVYDLGEINILEESFIEYKKFIQ HHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH DISLAELYNDKVKNKTDLNITTNKWLYNYQYAGIIARHIPNAKLIHCFRHPLDNILSLYR HHHHHHHHHHHCCCCCCCEEEECCEEEEEEHHHHHHHHCCCHHHHHHHHCCHHHHHHHHH THFASGNEYSSSLVDCARVYLDQEKVMKEYKNRYRSKIYDLNYDSLVNDPNKEIRSLISW HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHCCCCCHHHHHHHHH LGWEWQDSFLSPQLNSRSVSTASNVQVRSPINSKSIGGWKNYKDMLKPAIEILAKTNGYK HCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC NIAS CCCC >Mature Secondary Structure MKGFGEQHKSKKKRNETTTFQVPFPFPLRESQENINIITNTPSKLSKEQIINQALKFHSK CCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCC GNISEATKYYQYFINQGFKDHRVFSNYGAILRKQGKVKESGFFMRKAIEIQPNIPIINFN CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHEEEECCCCCEEECC MGNILKDLGKLKEAEIFIRKSIRMDPNLTKAYLSLSTITYSNIDNKTWQDNLFSDFILKY HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHH KSQVEQVEIYFARANILHKEKKYKKSYQNLKLANNLQLAIKASDINKRIKKSQLLLIESD HHHHHHHHEEEHHHHHHHHHHHHHHHHHHCEECCCEEEEEEECHHHHHHHHCEEEEEECC KKVVNKKEKINYAQSIFILGLPRCGSTLLESILSMNKDVYDLGEINILEESFIEYKKFIQ HHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH DISLAELYNDKVKNKTDLNITTNKWLYNYQYAGIIARHIPNAKLIHCFRHPLDNILSLYR HHHHHHHHHHHCCCCCCCEEEECCEEEEEEHHHHHHHHCCCHHHHHHHHCCHHHHHHHHH THFASGNEYSSSLVDCARVYLDQEKVMKEYKNRYRSKIYDLNYDSLVNDPNKEIRSLISW HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHCCCCCHHHHHHHHH LGWEWQDSFLSPQLNSRSVSTASNVQVRSPINSKSIGGWKNYKDMLKPAIEILAKTNGYK HCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC NIAS CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]