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The map label for this gene is accB [H]

Identifier: 124024739

GI number: 124024739

Start: 28460

End: 28957

Strand: Direct

Name: accB [H]

Synonym: NATL1_00261

Alternate gene names: 124024739

Gene position: 28460-28957 (Clockwise)

Preceding gene: 124024738

Following gene: 124024742

Centisome position: 1.53

GC content: 41.77

Gene sequence:

>498_bases
ATGACTATGAATCTTGATCACGAAGAGCTTCATCGCTTGTTGGCAACTTTAGCTGAGAGTGACATTAAAGAGTTTCGACT
TGAGGGAGAAGACTTTTGCCTGGAAGTTAAACGTAATCTTGGGACTTCTTCAGATTCAATAGCTTCTAATAAGAAAATCA
CTTCAGAAGATATTGATTCACCACCACCTCAATCTAAACTTGATGCTCTTCCAGTACAGAGCACTCCCCCTCCTTCAGTG
CCAGGTTCACGCTCTGAATTGGTTGAAGTAACTGCTCCTATGGTTGGGACCTTTTATCGTGCACCAGGCCCAGAAGAGCC
CCCTTTCGTGGAGATTGGATCGAGAATCAAAGTGGGGCAGGCTGTATGTATTCTTGAAGCAATGAAATTAATGAACGAAT
TAGAATCAGAGGTAAGTGGTGAAGTAATTGAAATTCTTGTAGAGAACGGAACACCAGTCGAGTTTGGTCAAGTTTTAATG
AGATTAAAACCTGTGTAA

Upstream 100 bases:

>100_bases
TGGAAACAGGAGCCCAAGTCATGGTCCCATTATTTATTTCAATTGGTGAGAAAATTCGAGTAGATACTCGAAATGACAGT
TATCTAGGCCGAGAGACACA

Downstream 100 bases:

>100_bases
AAGTTTTTACTTATTGAGACAGAAGCCAAGCGTTATTCATTGCTGCAACCATACTTTTTTCTCTTGCCTTGAACATTCCT
GCAATATCAAGAGCTGTCCC

Product: biotin / lipoyl attachment:Acetyl-CoA biotin carboxyl carrier subunit

Products: Malonyl-CoA; malonyl-CoA; phosphate; ADP [C]

Alternate protein names: BCCP [H]

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MTMNLDHEELHRLLATLAESDIKEFRLEGEDFCLEVKRNLGTSSDSIASNKKITSEDIDSPPPQSKLDALPVQSTPPPSV
PGSRSELVEVTAPMVGTFYRAPGPEEPPFVEIGSRIKVGQAVCILEAMKLMNELESEVSGEVIEILVENGTPVEFGQVLM
RLKPV

Sequences:

>Translated_165_residues
MTMNLDHEELHRLLATLAESDIKEFRLEGEDFCLEVKRNLGTSSDSIASNKKITSEDIDSPPPQSKLDALPVQSTPPPSV
PGSRSELVEVTAPMVGTFYRAPGPEEPPFVEIGSRIKVGQAVCILEAMKLMNELESEVSGEVIEILVENGTPVEFGQVLM
RLKPV
>Mature_164_residues
TMNLDHEELHRLLATLAESDIKEFRLEGEDFCLEVKRNLGTSSDSIASNKKITSEDIDSPPPQSKLDALPVQSTPPPSVP
GSRSELVEVTAPMVGTFYRAPGPEEPPFVEIGSRIKVGQAVCILEAMKLMNELESEVSGEVIEILVENGTPVEFGQVLMR
LKPV

Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]

COG id: COG0511

COG function: function code I; Biotin carboxyl carrier protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 biotinyl-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789653, Length=163, Percent_Identity=34.3558282208589, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001249
- InterPro:   IPR001882
- InterPro:   IPR000089
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00364 Biotin_lipoyl [H]

EC number: NA

Molecular weight: Translated: 18044; Mature: 17913

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMNLDHEELHRLLATLAESDIKEFRLEGEDFCLEVKRNLGTSSDSIASNKKITSEDIDS
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCC
PPPQSKLDALPVQSTPPPSVPGSRSELVEVTAPMVGTFYRAPGPEEPPFVEIGSRIKVGQ
CCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHH
AVCILEAMKLMNELESEVSGEVIEILVENGTPVEFGQVLMRLKPV
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TMNLDHEELHRLLATLAESDIKEFRLEGEDFCLEVKRNLGTSSDSIASNKKITSEDIDS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCC
PPPQSKLDALPVQSTPPPSVPGSRSELVEVTAPMVGTFYRAPGPEEPPFVEIGSRIKVGQ
CCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHH
AVCILEAMKLMNELESEVSGEVIEILVENGTPVEFGQVLMRLKPV
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acetyl-CoA; HCO3-; Proton; acetyl-CoA; ATP [C]

Specific reaction: acetyl-CoA = malonyl-CoA HCO3- + Proton + acetyl-CoA + ATP = malonyl-CoA + phosphate + ADP [C]

General reaction: Ligases; Forming Carbon-Carbon Bonds; acetyl-CoA carboxylase Reaction [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8102363; 11759840 [H]