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The map label for this gene is rsgA

Identifier: 124024731

GI number: 124024731

Start: 20921

End: 21859

Strand: Direct

Name: rsgA

Synonym: NATL1_00181

Alternate gene names: 124024731

Gene position: 20921-21859 (Clockwise)

Preceding gene: 124024730

Following gene: 124024735

Centisome position: 1.12

GC content: 31.84

Gene sequence:

>939_bases
GTGAATAAAAATAAATCTAATAAATTAAAAGGTATTGTTGTTGCACTTAAGGCAAATTTTTTAATCGTAGAGATTGATCA
TAAAAATTTTAAAGATTATTCATTTGATGAATTTAACGGGAAAATTAGACTTTTATGTATACGAAGAAGTAAATTAAATT
ATCAAGGTTTATTTATAGATGTAGGTGACATAGTTGGCGTCGAGTCTATAGATTATAAAAACAAACGAGCTGTAGTTTCT
GATGTAGAGCCTAGACAAAGTTTCTTAAAGCGTCCAGCAGTGGCAAATGTTACATTAGTTTCTATTTGTATCTCAGCTGA
TGAGCCTTTATTTGATATGGAGCAAACAAGCCGTTTTTTATTAACAGCTGAATGTGCAAATATAGAGCCATTAATAATTT
TAACTAAAATAGATTTAATTACAAAGAATGATTTGATTTTATATATAAATAAATTTAAATCTTGGGGGTATGATTGTATA
CCAGTATCTATACATAATTCTCAGGGTATTGATTCATTAATAGAACGATTGCGAAAAACAAAATTAACTGTACTTGCTGG
TCCTTCTGGAGTAGGAAAGACAAGTTTAATTAATCATTTAATCCCAACAGTTTCACTACCTACTTCATCTGTTTCAAAAA
AATTAAAGAGAGGTACACACACGACTAGGCATGTGGAACTTTTTGCTATTGGAAATGGATCACTTCTTGCTGATACACCG
GGGTTTAATCGTCCGGAAATAGTATGTGAGCCATCTGATTTTGCTTTTTTGTTCCCAGAGTTTCGAACTCAGTTAAGCAA
TTCACAATGCAAGTTCCGAAATTGTTTGCATAGAGATGAACCTGGTTGTGTAATTGATAAAGATCTTGAAAGATATCCTT
TTTATCGTGAGAACCTTGAAGAAATGATTAACTCTCCTCTCCCATACCAGGCAGGTTAA

Upstream 100 bases:

>100_bases
GGCGAAGCTGAAACTAGTGTTATTGATGGTTTACAAGAGAAAGGTTATAAAGTAAAAATATTGAATAAAGATTCAAAAAC
AGTAACTTTGATAATATCGA

Downstream 100 bases:

>100_bases
GTTTGAATCCGCCGGTCAAATCTTCCATTCGTTCTTTCATCGTCGAAGTTGAAACTTCGTGAGCAGATTTCATAGCTTCT
AGTATGGCCTCTTCGATTAT

Product: GTPases

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNKNKSNKLKGIVVALKANFLIVEIDHKNFKDYSFDEFNGKIRLLCIRRSKLNYQGLFIDVGDIVGVESIDYKNKRAVVS
DVEPRQSFLKRPAVANVTLVSICISADEPLFDMEQTSRFLLTAECANIEPLIILTKIDLITKNDLILYINKFKSWGYDCI
PVSIHNSQGIDSLIERLRKTKLTVLAGPSGVGKTSLINHLIPTVSLPTSSVSKKLKRGTHTTRHVELFAIGNGSLLADTP
GFNRPEIVCEPSDFAFLFPEFRTQLSNSQCKFRNCLHRDEPGCVIDKDLERYPFYRENLEEMINSPLPYQAG

Sequences:

>Translated_312_residues
MNKNKSNKLKGIVVALKANFLIVEIDHKNFKDYSFDEFNGKIRLLCIRRSKLNYQGLFIDVGDIVGVESIDYKNKRAVVS
DVEPRQSFLKRPAVANVTLVSICISADEPLFDMEQTSRFLLTAECANIEPLIILTKIDLITKNDLILYINKFKSWGYDCI
PVSIHNSQGIDSLIERLRKTKLTVLAGPSGVGKTSLINHLIPTVSLPTSSVSKKLKRGTHTTRHVELFAIGNGSLLADTP
GFNRPEIVCEPSDFAFLFPEFRTQLSNSQCKFRNCLHRDEPGCVIDKDLERYPFYRENLEEMINSPLPYQAG
>Mature_312_residues
MNKNKSNKLKGIVVALKANFLIVEIDHKNFKDYSFDEFNGKIRLLCIRRSKLNYQGLFIDVGDIVGVESIDYKNKRAVVS
DVEPRQSFLKRPAVANVTLVSICISADEPLFDMEQTSRFLLTAECANIEPLIILTKIDLITKNDLILYINKFKSWGYDCI
PVSIHNSQGIDSLIERLRKTKLTVLAGPSGVGKTSLINHLIPTVSLPTSSVSKKLKRGTHTTRHVELFAIGNGSLLADTP
GFNRPEIVCEPSDFAFLFPEFRTQLSNSQCKFRNCLHRDEPGCVIDKDLERYPFYRENLEEMINSPLPYQAG

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain

Homologues:

Organism=Escherichia coli, GI87082381, Length=250, Percent_Identity=31.6, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSGA_PROM1 (A2BZC2)

Other databases:

- EMBL:   CP000553
- RefSeq:   YP_001013847.1
- ProteinModelPortal:   A2BZC2
- SMR:   A2BZC2
- STRING:   A2BZC2
- GeneID:   4780881
- GenomeReviews:   CP000553_GR
- KEGG:   pme:NATL1_00181
- eggNOG:   COG1162
- HOGENOM:   HBG652450
- OMA:   RGDWERY
- BioCyc:   PMAR167555:NATL1_00181-MONOMER
- HAMAP:   MF_01820
- InterPro:   IPR010914
- InterPro:   IPR016027
- InterPro:   IPR004881
- TIGRFAMs:   TIGR00157

Pfam domain/function: PF03193 DUF258; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 35242; Mature: 35242

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNKSNKLKGIVVALKANFLIVEIDHKNFKDYSFDEFNGKIRLLCIRRSKLNYQGLFID
CCCCCCCCEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEE
VGDIVGVESIDYKNKRAVVSDVEPRQSFLKRPAVANVTLVSICISADEPLFDMEQTSRFL
CCCCCCCCCCCCCCCCEEECCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHCCEEE
LTAECANIEPLIILTKIDLITKNDLILYINKFKSWGYDCIPVSIHNSQGIDSLIERLRKT
EEEECCCCCEEEEEEEEEEEECCCEEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHC
KLTVLAGPSGVGKTSLINHLIPTVSLPTSSVSKKLKRGTHTTRHVELFAIGNGSLLADTP
EEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEEECCC
GFNRPEIVCEPSDFAFLFPEFRTQLSNSQCKFRNCLHRDEPGCVIDKDLERYPFYRENLE
CCCCCEEEECCCCCEEECHHHHHHHCCCCHHHHHHHCCCCCCEEECCCHHHCCCHHHHHH
EMINSPLPYQAG
HHHCCCCCCCCC
>Mature Secondary Structure
MNKNKSNKLKGIVVALKANFLIVEIDHKNFKDYSFDEFNGKIRLLCIRRSKLNYQGLFID
CCCCCCCCEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEE
VGDIVGVESIDYKNKRAVVSDVEPRQSFLKRPAVANVTLVSICISADEPLFDMEQTSRFL
CCCCCCCCCCCCCCCCEEECCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHCCEEE
LTAECANIEPLIILTKIDLITKNDLILYINKFKSWGYDCIPVSIHNSQGIDSLIERLRKT
EEEECCCCCEEEEEEEEEEEECCCEEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHC
KLTVLAGPSGVGKTSLINHLIPTVSLPTSSVSKKLKRGTHTTRHVELFAIGNGSLLADTP
EEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEEECCC
GFNRPEIVCEPSDFAFLFPEFRTQLSNSQCKFRNCLHRDEPGCVIDKDLERYPFYRENLE
CCCCCEEEECCCCCEEECHHHHHHHCCCCHHHHHHHCCCCCCEEECCCHHHCCCHHHHHH
EMINSPLPYQAG
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA