| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is sps [H]
Identifier: 124024705
GI number: 124024705
Start: 2670161
End: 2672284
Strand: Reverse
Name: sps [H]
Synonym: P9303_30171
Alternate gene names: 124024705
Gene position: 2672284-2670161 (Counterclockwise)
Preceding gene: 124024706
Following gene: 124024702
Centisome position: 99.61
GC content: 51.6
Gene sequence:
>2124_bases ATGGGTTTGAGATTGCTTCATCTGCATCTTCATGGACTGTTTCGATCTCACGACTTGGAATTGGGTCGCGATGCTGATAC AGGAGGCCAGGCTCTTTATGTGCTCGAGCTTGTCAGGGGCCTGGCTGCGCGTTCGGAAATTGAGCAGGTGGAGGTGGTTA CCCGCTTAATTCATGATCGTCGGGTTTCTACTGACTATGCCAATCCTATTGAGGATATTGCTCCTGGGGCCAAGATCATC AGGCTGCCTTTTGGACCAAGACGATATTTGCGCAAGGAGTTGTTTTGGCCCTATTTGGATGATTTAGCGGATCAGACCGT GAGCCATCTCCAACAGCAAGAACATCTTCCTGACTGGATTCATGCTCATTACGCCGATGCAGGCTATGTGGGAGCCCTTG TGAGTCGCAGGCTGGGTGTTCCCTTGGTGTTTACAGGTCATTCCTTGGGGAGGGAAAAGTTGCGGCGCCTGTTGGGAGTT GGTGGAGACCATGAACAGATCGAGCAAACATATGCCATTGGTCAACGCATTGATGCTGAAGAGTTGACTCTTGCTCATTG CAGTTTGGTGATTACGAGTACTCGCCAGGAAATTGATTATCAATATGCTCGCTATGGGCGTTTTGTTCCGGAGCAAGCGG AGGTGGTGCCTCCCGGCGTTGATTCCATTCGCTTCCATCCACTCCAATCTTCTAGTGAAACGGATGTTGTTGATGGATTG CTCGCGCCTTTTTTGAGGAAACCTGCTTTACCTCCTCTTTTGGCCATTTCCAGAGCTGTGCGACGTAAAAATATTCCTTT TTTGGTGGAGGCTTACGGCCGCTCGCCTGTGTTGCGTCAACGGCATAATCTTGTGCTTGTACTCGGCTGTCGGGATGATC CTCGTCAGTTGGAGAAGCAACAGCGGGAGGTATTCCAGCAGGTTTTTGATCTTGTGGATCGTTACGACCTCTATGGCCGG GTGGCTTATCCCAAACAGCACCGTCGTGATCAGATCCCAGCGATTTACCGATGGGCAGCCTTGCATCGTGGTTTGTTTGT GAATCCAGCGCTTACTGAGCCCTTTGGGCTCACTTTGCTTGAGGCGGCGGCCTGTGGTTTGCCGATGGTGGCGACTGATG ACGGTGGTCCACGCGACATCCTTGCTCGTTGTGAAAACGGCTTGTTGGTTGACGTTACTGATCTGGAGGCACTTCAGGAT GTAATGGAGCAGGCTGGTTCAGACGCAGATCAGTGGCGTCTTTGGAGTGATAACGGGATTGAGGCGGTCAGTCGGCATTT CAGTTGGGATGCTCATGTTTGCCATTACTTGGCATTGATGAAGCAACGTCTTGAATTGTCTCAGCCACGAATCTGGGCCA CAGACAAAGAGTGTCTGGGCAGTCCACTGGGGGAGAGTTTGTTGTTGCTTGATCTTGATAGTTCTCTCGAAGAACCCGAG GCAGAGGGTTTGGCTTCGCTGCGGGAGGGATTGGAATCCATTGGCTCTGGCGATGCGCATGGTTTGGGAGTATTGACGGG TCGTTCTGTGCAGGCTGCAAAGAAGCGTTATGCAGAGCTGCATCTGCCTTTACCTCGGGTTTGGATTAGTCGCGCGGGTA CTGAAATCCATTACGGATTGGAGGATCAGGCGGATCGCTTTTGGCAGGCCCATATCGACGTTGATTGGCAGCGACAGGCA GTGGTGTCTGCTTTGGCTGATCTCAAGGACCATTTGACCCTTCAGGACGATCAGGAGCAGGGTCCTCACAAGGTGAGTTA TCTATTGAAAGAGCATGGCGAGGCGATTTTGCCACTCGTCCGTCAGCGTTTAAGGCAAAGGGGTCAGGCGGCACGTCCTC ATTTGCGTTGTCATTGGTTTTTGGATGTGGTGCCTTTGCGGGCCTCCCGTAGCGAAGCCATTCGCTATCTCGCTCTTCGT TGGGGGCTGCCTCTTGAGCAGATTTTGGTTGTTGCCAGTCAACAAGGCGATGCTGAATTGGTAAGGGGATTGACTGCTTC AGTAGTCCTTGCAGAGCATGATCCTTGTCTGGAGGGTTTGCGACATCAGCAACGAGTGTTTTTTGCTAGCAGCCCGCATT TGTTTGGACTTTTAGATGGCTTAAATCACTATCGGTTTTTCTGA
Upstream 100 bases:
>100_bases CTCATCCTTTCTTTAGGCTTATGAGGATGGAAGTTCATTGATTATTTCTTGATGGCCATCCGCATCTGGATTGGTTCGTT GATCGCCTTGGAGGCATCAG
Downstream 100 bases:
>100_bases AAGTCTTAAGTGACACCCTTGCCCTTTATTACCTGGATGGATGCGGCGGCTCGATCAGCTTTAGAGCGAACTGCTTCCAG AGACTTGCCTTTGGCTAAAG
Product: sucrose phosphate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 707; Mature: 706
Protein sequence:
>707_residues MGLRLLHLHLHGLFRSHDLELGRDADTGGQALYVLELVRGLAARSEIEQVEVVTRLIHDRRVSTDYANPIEDIAPGAKII RLPFGPRRYLRKELFWPYLDDLADQTVSHLQQQEHLPDWIHAHYADAGYVGALVSRRLGVPLVFTGHSLGREKLRRLLGV GGDHEQIEQTYAIGQRIDAEELTLAHCSLVITSTRQEIDYQYARYGRFVPEQAEVVPPGVDSIRFHPLQSSSETDVVDGL LAPFLRKPALPPLLAISRAVRRKNIPFLVEAYGRSPVLRQRHNLVLVLGCRDDPRQLEKQQREVFQQVFDLVDRYDLYGR VAYPKQHRRDQIPAIYRWAALHRGLFVNPALTEPFGLTLLEAAACGLPMVATDDGGPRDILARCENGLLVDVTDLEALQD VMEQAGSDADQWRLWSDNGIEAVSRHFSWDAHVCHYLALMKQRLELSQPRIWATDKECLGSPLGESLLLLDLDSSLEEPE AEGLASLREGLESIGSGDAHGLGVLTGRSVQAAKKRYAELHLPLPRVWISRAGTEIHYGLEDQADRFWQAHIDVDWQRQA VVSALADLKDHLTLQDDQEQGPHKVSYLLKEHGEAILPLVRQRLRQRGQAARPHLRCHWFLDVVPLRASRSEAIRYLALR WGLPLEQILVVASQQGDAELVRGLTASVVLAEHDPCLEGLRHQQRVFFASSPHLFGLLDGLNHYRFF
Sequences:
>Translated_707_residues MGLRLLHLHLHGLFRSHDLELGRDADTGGQALYVLELVRGLAARSEIEQVEVVTRLIHDRRVSTDYANPIEDIAPGAKII RLPFGPRRYLRKELFWPYLDDLADQTVSHLQQQEHLPDWIHAHYADAGYVGALVSRRLGVPLVFTGHSLGREKLRRLLGV GGDHEQIEQTYAIGQRIDAEELTLAHCSLVITSTRQEIDYQYARYGRFVPEQAEVVPPGVDSIRFHPLQSSSETDVVDGL LAPFLRKPALPPLLAISRAVRRKNIPFLVEAYGRSPVLRQRHNLVLVLGCRDDPRQLEKQQREVFQQVFDLVDRYDLYGR VAYPKQHRRDQIPAIYRWAALHRGLFVNPALTEPFGLTLLEAAACGLPMVATDDGGPRDILARCENGLLVDVTDLEALQD VMEQAGSDADQWRLWSDNGIEAVSRHFSWDAHVCHYLALMKQRLELSQPRIWATDKECLGSPLGESLLLLDLDSSLEEPE AEGLASLREGLESIGSGDAHGLGVLTGRSVQAAKKRYAELHLPLPRVWISRAGTEIHYGLEDQADRFWQAHIDVDWQRQA VVSALADLKDHLTLQDDQEQGPHKVSYLLKEHGEAILPLVRQRLRQRGQAARPHLRCHWFLDVVPLRASRSEAIRYLALR WGLPLEQILVVASQQGDAELVRGLTASVVLAEHDPCLEGLRHQQRVFFASSPHLFGLLDGLNHYRFF >Mature_706_residues GLRLLHLHLHGLFRSHDLELGRDADTGGQALYVLELVRGLAARSEIEQVEVVTRLIHDRRVSTDYANPIEDIAPGAKIIR LPFGPRRYLRKELFWPYLDDLADQTVSHLQQQEHLPDWIHAHYADAGYVGALVSRRLGVPLVFTGHSLGREKLRRLLGVG GDHEQIEQTYAIGQRIDAEELTLAHCSLVITSTRQEIDYQYARYGRFVPEQAEVVPPGVDSIRFHPLQSSSETDVVDGLL APFLRKPALPPLLAISRAVRRKNIPFLVEAYGRSPVLRQRHNLVLVLGCRDDPRQLEKQQREVFQQVFDLVDRYDLYGRV AYPKQHRRDQIPAIYRWAALHRGLFVNPALTEPFGLTLLEAAACGLPMVATDDGGPRDILARCENGLLVDVTDLEALQDV MEQAGSDADQWRLWSDNGIEAVSRHFSWDAHVCHYLALMKQRLELSQPRIWATDKECLGSPLGESLLLLDLDSSLEEPEA EGLASLREGLESIGSGDAHGLGVLTGRSVQAAKKRYAELHLPLPRVWISRAGTEIHYGLEDQADRFWQAHIDVDWQRQAV VSALADLKDHLTLQDDQEQGPHKVSYLLKEHGEAILPLVRQRLRQRGQAARPHLRCHWFLDVVPLRASRSEAIRYLALRW GLPLEQILVVASQQGDAELVRGLTASVVLAEHDPCLEGLRHQQRVFFASSPHLFGLLDGLNHYRFF
Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR000368 [H]
Pfam domain/function: PF00534 Glycos_transf_1; PF00862 Sucrose_synth [H]
EC number: =2.4.1.246 [H]
Molecular weight: Translated: 79929; Mature: 79798
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRLLHLHLHGLFRSHDLELGRDADTGGQALYVLELVRGLAARSEIEQVEVVTRLIHDR CCEEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVSTDYANPIEDIAPGAKIIRLPFGPRRYLRKELFWPYLDDLADQTVSHLQQQEHLPDWI CCCCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH HAHYADAGYVGALVSRRLGVPLVFTGHSLGREKLRRLLGVGGDHEQIEQTYAIGQRIDAE HHHHCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHH ELTLAHCSLVITSTRQEIDYQYARYGRFVPEQAEVVPPGVDSIRFHPLQSSSETDVVDGL HHHHHHHHEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHH LAPFLRKPALPPLLAISRAVRRKNIPFLVEAYGRSPVLRQRHNLVLVLGCRDDPRQLEKQ HHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCEEEEEECCCCHHHHHHH QREVFQQVFDLVDRYDLYGRVAYPKQHRRDQIPAIYRWAALHRGLFVNPALTEPFGLTLL HHHHHHHHHHHHHHHHHHCEECCCHHHHCCCCHHHHHHHHHHCCEEECCCCCCCHHHHHH EAAACGLPMVATDDGGPRDILARCENGLLVDVTDLEALQDVMEQAGSDADQWRLWSDNGI HHHHCCCCEEECCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCHHEEEECCCCH EAVSRHFSWDAHVCHYLALMKQRLELSQPRIWATDKECLGSPLGESLLLLDLDSSLEEPE HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCEEEEECCCCCCCCH AEGLASLREGLESIGSGDAHGLGVLTGRSVQAAKKRYAELHLPLPRVWISRAGTEIHYGL HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCEEEECC EDQADRFWQAHIDVDWQRQAVVSALADLKDHLTLQDDQEQGPHKVSYLLKEHGEAILPLV CHHHHHHEEHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHH RQRLRQRGQAARPHLRCHWFLDVVPLRASRSEAIRYLALRWGLPLEQILVVASQQGDAEL HHHHHHCCCCCCCCEEEEEEEEEHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHH VRGLTASVVLAEHDPCLEGLRHQQRVFFASSPHLFGLLDGLNHYRFF HHCCHHHEEEECCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCC >Mature Secondary Structure GLRLLHLHLHGLFRSHDLELGRDADTGGQALYVLELVRGLAARSEIEQVEVVTRLIHDR CEEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVSTDYANPIEDIAPGAKIIRLPFGPRRYLRKELFWPYLDDLADQTVSHLQQQEHLPDWI CCCCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH HAHYADAGYVGALVSRRLGVPLVFTGHSLGREKLRRLLGVGGDHEQIEQTYAIGQRIDAE HHHHCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHH ELTLAHCSLVITSTRQEIDYQYARYGRFVPEQAEVVPPGVDSIRFHPLQSSSETDVVDGL HHHHHHHHEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHH LAPFLRKPALPPLLAISRAVRRKNIPFLVEAYGRSPVLRQRHNLVLVLGCRDDPRQLEKQ HHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCEEEEEECCCCHHHHHHH QREVFQQVFDLVDRYDLYGRVAYPKQHRRDQIPAIYRWAALHRGLFVNPALTEPFGLTLL HHHHHHHHHHHHHHHHHHCEECCCHHHHCCCCHHHHHHHHHHCCEEECCCCCCCHHHHHH EAAACGLPMVATDDGGPRDILARCENGLLVDVTDLEALQDVMEQAGSDADQWRLWSDNGI HHHHCCCCEEECCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCHHEEEECCCCH EAVSRHFSWDAHVCHYLALMKQRLELSQPRIWATDKECLGSPLGESLLLLDLDSSLEEPE HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCEEEEECCCCCCCCH AEGLASLREGLESIGSGDAHGLGVLTGRSVQAAKKRYAELHLPLPRVWISRAGTEIHYGL HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCEEEECC EDQADRFWQAHIDVDWQRQAVVSALADLKDHLTLQDDQEQGPHKVSYLLKEHGEAILPLV CHHHHHHEEHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHH RQRLRQRGQAARPHLRCHWFLDVVPLRASRSEAIRYLALRWGLPLEQILVVASQQGDAEL HHHHHHCCCCCCCCEEEEEEEEEHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHH VRGLTASVVLAEHDPCLEGLRHQQRVFFASSPHLFGLLDGLNHYRFF HHCCHHHEEEECCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]