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The map label for this gene is ureF [H]

Identifier: 124024664

GI number: 124024664

Start: 2629980

End: 2630663

Strand: Reverse

Name: ureF [H]

Synonym: P9303_29761

Alternate gene names: 124024664

Gene position: 2630663-2629980 (Counterclockwise)

Preceding gene: 124024665

Following gene: 124024663

Centisome position: 98.06

GC content: 55.85

Gene sequence:

>684_bases
ATGAGCAGTCTCGCTTTGCTTCAGCTTGTTAGCCCGGCTTTGCCGGTGGGTGCGTTCAGTTATTCGGAGGGTTTGGAACT
GCTGGTGCAGCGTGAGCAGCTTCAGGATCGAGCAACTTTGGCAAGTTGGTTGGAGGCGGAGCTCAGTCGCGGGCAGGTCA
TGATCGAAGCTGCTGCTTTGCGTCCGCTGCGTCATTCCCTCAGCCAATGGAAGGTGAGTGCTGAGCAGGGCAAAGTTGAC
CATGGCACTGCTGTGCGGGATTGGGCTCAATGGTTGATTGCACTGCGAGATGCGGCTGAAGTAAGAGCCCAGCAGCAGCA
GATGGGTCGATCTCTTTTGCAGTTATTAGCTGAGCTGGGTCATCCTCTCCCTGATGGAGGAGTGGATTTTGGTTGGCCAG
TGGCTTGGGCTTGGGCTGGTTTGGCTTGGGAGATAACGCCTCTGGAGGTTGTGCAGGGTTACCTGTTTGGTTGGGTGGCT
AATCAGCTCAGTGCGGCCGTGCGTCTTGTTCCGCTGGGGCCAACTGAGGCACAACGGTTGCAGCGTCAGCTTCAGCCGCT
CATTGAAATGCAGGCCATTAGCTTGCTTGATGTGGATCCACAGCAGCTTTGGTGCGGAGGAGTGGGTTCTGCTATTGCAC
AGCTCTCCCATGCTGAGCTTTATTCCCAATTATTCCGGAGCTGA

Upstream 100 bases:

>100_bases
AGTCTGTGATGGAGCCATTTTATCCAGAGCCTGGGGCCTATCAAGGCGTCCATAGCCATGATCAACAGCCCATTGATGGG
CACCAACAACGTCATCACTG

Downstream 100 bases:

>100_bases
TGAGTAGCAAACTGCGCTTAGGTGTGGCTGGCCCGGTGGGTTCGGGTAAGACAGCACTAGTGGAGGCAATTTGTCGCCGT
CTACGAGATCAGTTGCAATT

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSSLALLQLVSPALPVGAFSYSEGLELLVQREQLQDRATLASWLEAELSRGQVMIEAAALRPLRHSLSQWKVSAEQGKVD
HGTAVRDWAQWLIALRDAAEVRAQQQQMGRSLLQLLAELGHPLPDGGVDFGWPVAWAWAGLAWEITPLEVVQGYLFGWVA
NQLSAAVRLVPLGPTEAQRLQRQLQPLIEMQAISLLDVDPQQLWCGGVGSAIAQLSHAELYSQLFRS

Sequences:

>Translated_227_residues
MSSLALLQLVSPALPVGAFSYSEGLELLVQREQLQDRATLASWLEAELSRGQVMIEAAALRPLRHSLSQWKVSAEQGKVD
HGTAVRDWAQWLIALRDAAEVRAQQQQMGRSLLQLLAELGHPLPDGGVDFGWPVAWAWAGLAWEITPLEVVQGYLFGWVA
NQLSAAVRLVPLGPTEAQRLQRQLQPLIEMQAISLLDVDPQQLWCGGVGSAIAQLSHAELYSQLFRS
>Mature_226_residues
SSLALLQLVSPALPVGAFSYSEGLELLVQREQLQDRATLASWLEAELSRGQVMIEAAALRPLRHSLSQWKVSAEQGKVDH
GTAVRDWAQWLIALRDAAEVRAQQQQMGRSLLQLLAELGHPLPDGGVDFGWPVAWAWAGLAWEITPLEVVQGYLFGWVAN
QLSAAVRLVPLGPTEAQRLQRQLQPLIEMQAISLLDVDPQQLWCGGVGSAIAQLSHAELYSQLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 24988; Mature: 24857

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLALLQLVSPALPVGAFSYSEGLELLVQREQLQDRATLASWLEAELSRGQVMIEAAAL
CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHH
RPLRHSLSQWKVSAEQGKVDHGTAVRDWAQWLIALRDAAEVRAQQQQMGRSLLQLLAELG
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HPLPDGGVDFGWPVAWAWAGLAWEITPLEVVQGYLFGWVANQLSAAVRLVPLGPTEAQRL
CCCCCCCCCCCCHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHH
QRQLQPLIEMQAISLLDVDPQQLWCGGVGSAIAQLSHAELYSQLFRS
HHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSLALLQLVSPALPVGAFSYSEGLELLVQREQLQDRATLASWLEAELSRGQVMIEAAAL
CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHH
RPLRHSLSQWKVSAEQGKVDHGTAVRDWAQWLIALRDAAEVRAQQQQMGRSLLQLLAELG
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HPLPDGGVDFGWPVAWAWAGLAWEITPLEVVQGYLFGWVANQLSAAVRLVPLGPTEAQRL
CCCCCCCCCCCCHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHH
QRQLQPLIEMQAISLLDVDPQQLWCGGVGSAIAQLSHAELYSQLFRS
HHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]