| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024633
Identifier: 124024633
GI number: 124024633
Start: 2605043
End: 2605792
Strand: Reverse
Name: 124024633
Synonym: P9303_29451
Alternate gene names: NA
Gene position: 2605792-2605043 (Counterclockwise)
Preceding gene: 124024634
Following gene: 124024632
Centisome position: 97.13
GC content: 39.73
Gene sequence:
>750_bases ATGAAAACTGATTGGGATTATTCTGACCTAGCTAATGCCTATCTTAAGAGGCCAGATTATTCTGACAATGCAATTGACGC AATGTTGTCTATTGTAGAGGCTCGAAAATTATGGAAATTTTGTGATGTCGGCGCTGGAGTTGCTCACTTAACTCTTATGT TGTTAGAGCGTGGTTTCGAGGTGGTTCCTGTCGAACCAAATGATGCTATGCGCACAAGCGGTATCAATAGAACTAAGTCA TTTTCTCAAGTAAATTGGAAAGAAGGAACGGGAGAGGTCACAGGCGAGGATTCTAACTTGTTTGACATGGTTACTTTTGG CAGCTCATTTAATGTTTGTGATCGACAATTAGCGCTTAAAGAAACTGCCCGAATATTAAAACCTAATGGATGGTTTGCAT GTATGTGGAACCATCGAGACTTGAACGACCCTATTCAAAAAAATATTGAGTTAATAATTAAAGAGCATGTCCCCGTATAT GGGTATGGTACCCGTAGAGAAGATCAAACTTCTGTAATTAATCACTCAAAATTGTTTGGCTCTGTTGTTCATGTTGACTC CAGAATCATGCACGAGCAAACCATTGATGAGTGTGTTGAAGCATGGCGTTCTCACGCAACCTTAGAAAGACAAGCCGGTA TTGCATTCCCTGAGGTCGTTAACTTAATACAACAGTACCTTAATTCTCTTGGAACTGCTAGTATTAAGATACCGTATTCT ACAAATATCTGGCTTGCTAAACTGCTTTGA
Upstream 100 bases:
>100_bases ATGCCCTGCTCTCCAGACCATGTGTTACTAGCCGAAACAAATTACAACTGCGAAAGCGAAGCATCTAAAATAGTAAGTCG GGTTCTGCGACTAAAACAAA
Downstream 100 bases:
>100_bases TATAACGTGAAGCTTAGCTTTTTGTCCAAGGCCAGAACTCTGGCCTCATTGAAAAATGTTGTTGAACATGCTCAGATCGC ACCGTTAACATTTTTCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKTDWDYSDLANAYLKRPDYSDNAIDAMLSIVEARKLWKFCDVGAGVAHLTLMLLERGFEVVPVEPNDAMRTSGINRTKS FSQVNWKEGTGEVTGEDSNLFDMVTFGSSFNVCDRQLALKETARILKPNGWFACMWNHRDLNDPIQKNIELIIKEHVPVY GYGTRREDQTSVINHSKLFGSVVHVDSRIMHEQTIDECVEAWRSHATLERQAGIAFPEVVNLIQQYLNSLGTASIKIPYS TNIWLAKLL
Sequences:
>Translated_249_residues MKTDWDYSDLANAYLKRPDYSDNAIDAMLSIVEARKLWKFCDVGAGVAHLTLMLLERGFEVVPVEPNDAMRTSGINRTKS FSQVNWKEGTGEVTGEDSNLFDMVTFGSSFNVCDRQLALKETARILKPNGWFACMWNHRDLNDPIQKNIELIIKEHVPVY GYGTRREDQTSVINHSKLFGSVVHVDSRIMHEQTIDECVEAWRSHATLERQAGIAFPEVVNLIQQYLNSLGTASIKIPYS TNIWLAKLL >Mature_249_residues MKTDWDYSDLANAYLKRPDYSDNAIDAMLSIVEARKLWKFCDVGAGVAHLTLMLLERGFEVVPVEPNDAMRTSGINRTKS FSQVNWKEGTGEVTGEDSNLFDMVTFGSSFNVCDRQLALKETARILKPNGWFACMWNHRDLNDPIQKNIELIIKEHVPVY GYGTRREDQTSVINHSKLFGSVVHVDSRIMHEQTIDECVEAWRSHATLERQAGIAFPEVVNLIQQYLNSLGTASIKIPYS TNIWLAKLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 28283; Mature: 28283
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTDWDYSDLANAYLKRPDYSDNAIDAMLSIVEARKLWKFCDVGAGVAHLTLMLLERGFE CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCE VVPVEPNDAMRTSGINRTKSFSQVNWKEGTGEVTGEDSNLFDMVTFGSSFNVCDRQLALK EEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHH ETARILKPNGWFACMWNHRDLNDPIQKNIELIIKEHVPVYGYGTRREDQTSVINHSKLFG HHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHH SVVHVDSRIMHEQTIDECVEAWRSHATLERQAGIAFPEVVNLIQQYLNSLGTASIKIPYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCC TNIWLAKLL CCEEEEECC >Mature Secondary Structure MKTDWDYSDLANAYLKRPDYSDNAIDAMLSIVEARKLWKFCDVGAGVAHLTLMLLERGFE CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCE VVPVEPNDAMRTSGINRTKSFSQVNWKEGTGEVTGEDSNLFDMVTFGSSFNVCDRQLALK EEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHH ETARILKPNGWFACMWNHRDLNDPIQKNIELIIKEHVPVYGYGTRREDQTSVINHSKLFG HHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHH SVVHVDSRIMHEQTIDECVEAWRSHATLERQAGIAFPEVVNLIQQYLNSLGTASIKIPYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCC TNIWLAKLL CCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]