| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024630
Identifier: 124024630
GI number: 124024630
Start: 2601075
End: 2601809
Strand: Reverse
Name: 124024630
Synonym: P9303_29421
Alternate gene names: NA
Gene position: 2601809-2601075 (Counterclockwise)
Preceding gene: 124024631
Following gene: 124024624
Centisome position: 96.99
GC content: 38.78
Gene sequence:
>735_bases TTGATTAATGCCCCCCCTCTCTTGAGAGCGATTATTCTTGCTGCTGGTCGTGGTAGTCGTATGAAAGCGTTGACCAGAGA AAAGCCCAAATGCCTTGTATCAGTAAGAGGCAAAAGCTTAATCGATTGGCAATTAGAAACTTTTCATGAATGCGATATTC AGGACATCGCGATTGTGACAGGTTATAAAAAGAATCATTTAACCAACCGCGGGCTTGTTGAATTTCATAATCAACACTGG GAGAATACAAATATGGTTTGCTCACTTCAATGCGCAAGCTCATGGCTTGAAAATTACCCATGCATTGTTACTTATTCTGA TATTTTTTTTGAACCGTCCGCTGTTAAGCTACTTCTTTCCTCTACAAGTTCAATAGCAATCACTTACGACCCTAATTGGC TTTCTCTATGGCAGAGGAGATTTGAAGATCCTTTGGTTGATGCCGAGACATTTCGTGTCTCTGATAATCAAACTTTGCTA GAAATTGGGAATAGACCTTCGAATTTAGACACTATACAAGGCCAATACATGGGTTTATTGTCATTCACTCCCAAAGGATG GTGCGAAATGTTTAATATGATCTCTTCCTTAAAAGACTACAATGTAAAAAGTATGCATATGACTGATGCATTGCAAAAAT TAATAGAGTTGAATCGTATCTCAATACATGCACTTCCATACTTTGGCGAATGGGGAGAGATCGACTCTGTTAGCGATTTG TCTGTTTATCAATGA
Upstream 100 bases:
>100_bases ATTATTTTAATTGGTTTAGTTGAACGATACACAACTTTAATTAGCGTTAAATTTTTTGTCTATCTTTATGACTGCTTTGT CTGGTTGATTTAACATAGAT
Downstream 100 bases:
>100_bases AATACGTTTATCTTGTAAGTGCTGGTAGGAATGGGCCGCTGTTCCTTCAAAGCCTTTAGAATTCAGATCCTGAAATTCTG AAATTTCCAGGTATATATTA
Product: hypothetical protein
Products: NA
Alternate protein names: Transferase; Sugar Nucleotidyltransferase; Sugar Metabolism Cluster Protein; Phosphoenolpyruvate Phosphomutase; Sugar-1-Phosphate Nucleotidyltransferase; LicC Protein; 2 3-Dimethylmalate Lyase; Sugar Nucleotidyltransferase-Like Protein
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MINAPPLLRAIILAAGRGSRMKALTREKPKCLVSVRGKSLIDWQLETFHECDIQDIAIVTGYKKNHLTNRGLVEFHNQHW ENTNMVCSLQCASSWLENYPCIVTYSDIFFEPSAVKLLLSSTSSIAITYDPNWLSLWQRRFEDPLVDAETFRVSDNQTLL EIGNRPSNLDTIQGQYMGLLSFTPKGWCEMFNMISSLKDYNVKSMHMTDALQKLIELNRISIHALPYFGEWGEIDSVSDL SVYQ
Sequences:
>Translated_244_residues MINAPPLLRAIILAAGRGSRMKALTREKPKCLVSVRGKSLIDWQLETFHECDIQDIAIVTGYKKNHLTNRGLVEFHNQHW ENTNMVCSLQCASSWLENYPCIVTYSDIFFEPSAVKLLLSSTSSIAITYDPNWLSLWQRRFEDPLVDAETFRVSDNQTLL EIGNRPSNLDTIQGQYMGLLSFTPKGWCEMFNMISSLKDYNVKSMHMTDALQKLIELNRISIHALPYFGEWGEIDSVSDL SVYQ >Mature_244_residues MINAPPLLRAIILAAGRGSRMKALTREKPKCLVSVRGKSLIDWQLETFHECDIQDIAIVTGYKKNHLTNRGLVEFHNQHW ENTNMVCSLQCASSWLENYPCIVTYSDIFFEPSAVKLLLSSTSSIAITYDPNWLSLWQRRFEDPLVDAETFRVSDNQTLL EIGNRPSNLDTIQGQYMGLLSFTPKGWCEMFNMISSLKDYNVKSMHMTDALQKLIELNRISIHALPYFGEWGEIDSVSDL SVYQ
Specific function: Unknown
COG id: COG1213
COG function: function code M; Predicted sugar nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27917; Mature: 27917
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINAPPLLRAIILAAGRGSRMKALTREKPKCLVSVRGKSLIDWQLETFHECDIQDIAIVT CCCCHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCEEEEEEHHHHHCCCCCEEEEEE GYKKNHLTNRGLVEFHNQHWENTNMVCSLQCASSWLENYPCIVTYSDIFFEPSAVKLLLS CCHHHCCCCCCHHHHHHCCCCCCCCEEEEHHHHHHHHCCCEEEEEHHHEECCHHHHHEEE STSSIAITYDPNWLSLWQRRFEDPLVDAETFRVSDNQTLLEIGNRPSNLDTIQGQYMGLL CCCEEEEEECCCHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCEEEEE SFTPKGWCEMFNMISSLKDYNVKSMHMTDALQKLIELNRISIHALPYFGEWGEIDSVSDL ECCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCC SVYQ CCCC >Mature Secondary Structure MINAPPLLRAIILAAGRGSRMKALTREKPKCLVSVRGKSLIDWQLETFHECDIQDIAIVT CCCCHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCEEEEEEHHHHHCCCCCEEEEEE GYKKNHLTNRGLVEFHNQHWENTNMVCSLQCASSWLENYPCIVTYSDIFFEPSAVKLLLS CCHHHCCCCCCHHHHHHCCCCCCCCEEEEHHHHHHHHCCCEEEEEHHHEECCHHHHHEEE STSSIAITYDPNWLSLWQRRFEDPLVDAETFRVSDNQTLLEIGNRPSNLDTIQGQYMGLL CCCEEEEEECCCHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCEEEEE SFTPKGWCEMFNMISSLKDYNVKSMHMTDALQKLIELNRISIHALPYFGEWGEIDSVSDL ECCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCC SVYQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA