| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024591
Identifier: 124024591
GI number: 124024591
Start: 2567731
End: 2568279
Strand: Reverse
Name: 124024591
Synonym: P9303_29031
Alternate gene names: NA
Gene position: 2568279-2567731 (Counterclockwise)
Preceding gene: 124024592
Following gene: 124024590
Centisome position: 95.74
GC content: 55.56
Gene sequence:
>549_bases ATGCCCCTGGTGCCTCTGCTGCCGCTTTTTCATCGCTTCAATAGGGAATATTTCAATGGCGCCCTAGCGATTGGATCCCA GCCTCTTCTGTCTGTGCGGTGGAGTGATGGTCGATTGCGCAAGACAGCAGGTTTTTATCGTCGTGGTTTAAGGGTTGACG GCCGCAATGGCTGCGAGATCGTTCTTTCTCGTCCTTTGCTGGAGCTCCTGCCTCAGACCGCCACTGAAAGCACTCTTTGC CACGAAATGATCCATGCCTGGATTGATCTTGTACTGCAGGTCAAGGAGAGTCATGGCCCTAACTTTCATGCCCGGATGGC CGCCATTAATGCTGCCCAGAACCAGTTTCAGGTGAGTGTGCGCCATCAGTTTCCCGTTCCTAAAACGCCGCCGCGGTGGT GGGCGGTTTGCCCTCGCTGTGGTCTTCGTTCTCCTTATCAGCGGCGTGTTCATCGCGCTGCTTGTCGTCAATGTTGCGAC CGTCACTATGGGGGTAGCTGGCATGCCAGCTGTGTGTTCGTCTATGAACCTGCGTCACCGGAGGCCTGA
Upstream 100 bases:
>100_bases AGAGTCTGACTGACCGACTTCAGAAATATGGTTCTTCAGCGATTGTGTGAAGTGGGCAGACTGTCAAAGCTTGATTTAAG GGCCTACCCCACGCGCATTA
Downstream 100 bases:
>100_bases GTGGACATGTTTTTCTGGGTGCTTCAGGTCAGTGGGGTCTCGATTGCCCTAATCGGTTGGCAACGGGAGCAATGGTTGCA CCGGCGGCGCCGGTAACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MPLVPLLPLFHRFNREYFNGALAIGSQPLLSVRWSDGRLRKTAGFYRRGLRVDGRNGCEIVLSRPLLELLPQTATESTLC HEMIHAWIDLVLQVKESHGPNFHARMAAINAAQNQFQVSVRHQFPVPKTPPRWWAVCPRCGLRSPYQRRVHRAACRQCCD RHYGGSWHASCVFVYEPASPEA
Sequences:
>Translated_182_residues MPLVPLLPLFHRFNREYFNGALAIGSQPLLSVRWSDGRLRKTAGFYRRGLRVDGRNGCEIVLSRPLLELLPQTATESTLC HEMIHAWIDLVLQVKESHGPNFHARMAAINAAQNQFQVSVRHQFPVPKTPPRWWAVCPRCGLRSPYQRRVHRAACRQCCD RHYGGSWHASCVFVYEPASPEA >Mature_181_residues PLVPLLPLFHRFNREYFNGALAIGSQPLLSVRWSDGRLRKTAGFYRRGLRVDGRNGCEIVLSRPLLELLPQTATESTLCH EMIHAWIDLVLQVKESHGPNFHARMAAINAAQNQFQVSVRHQFPVPKTPPRWWAVCPRCGLRSPYQRRVHRAACRQCCDR HYGGSWHASCVFVYEPASPEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI58331107, Length=161, Percent_Identity=35.4037267080745, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI58331105, Length=167, Percent_Identity=34.7305389221557, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17564398, Length=160, Percent_Identity=34.375, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20811; Mature: 20680
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVPLLPLFHRFNREYFNGALAIGSQPLLSVRWSDGRLRKTAGFYRRGLRVDGRNGCEI CCCCHHHHHHHHHCHHHHCCEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEE VLSRPLLELLPQTATESTLCHEMIHAWIDLVLQVKESHGPNFHARMAAINAAQNQFQVSV EECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEE RHQFPVPKTPPRWWAVCPRCGLRSPYQRRVHRAACRQCCDRHYGGSWHASCVFVYEPASP EECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC EA CC >Mature Secondary Structure PLVPLLPLFHRFNREYFNGALAIGSQPLLSVRWSDGRLRKTAGFYRRGLRVDGRNGCEI CCCHHHHHHHHHCHHHHCCEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEE VLSRPLLELLPQTATESTLCHEMIHAWIDLVLQVKESHGPNFHARMAAINAAQNQFQVSV EECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEE RHQFPVPKTPPRWWAVCPRCGLRSPYQRRVHRAACRQCCDRHYGGSWHASCVFVYEPASP EECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC EA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA