| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024545
Identifier: 124024545
GI number: 124024545
Start: 2526836
End: 2527561
Strand: Reverse
Name: 124024545
Synonym: P9303_28571
Alternate gene names: NA
Gene position: 2527561-2526836 (Counterclockwise)
Preceding gene: 124024549
Following gene: 124024544
Centisome position: 94.22
GC content: 50.14
Gene sequence:
>726_bases TTGAATCTGCTGCAAGACCTGATGGGAGCAGACGTATCACTGCTGCCTTCCATACGCCTGCTGGCATCTCAACCAACCTT CCTTCAATTCATCAACGCAAAGTCAGAAGCAGGTCTAGTTCCTCAACGAGATGAGCTTCTAACAACATCCCATGAAATGC TTGCGCCCTCATTGGTCACACGCATTGCCAGCTTTCTTGATGGCTACTTGAGCGCCCGCTCTGATCAAGCCCAATCAACT CCGCCATCAGAGCCACAGATGCCCTTTAAGGGAACATCCACACCAGAGCCATCTTTTCCAGCGGTATTAAGTAATTCATC TGATGAACTGCCATCCACCGTGGTGGACCAGTTCGCCAAACCTTCAAGCTCGCCAGCAGCAGATCATTCTTCTTCTCATC AAGGTGGAAGTAGCCAAATAGTGGTGGGATTGATCATCGTTTTGGTAGTGCTAACAGGCTTGTCCGCGGCCTTCGCTTTA TTTACGGTGCCAGCGCTTTGCGAACCCCTTGGTCTTTGTGCAGCAGAAGAAAAAACTGAAGAGAAAAAAGACCGCAAGAA GGAGGATGCAGAGAAACCTGATAGCGCAGCAGAGACTCCTTCAACACCAAAAGAGAAAGCACCAGTAGAGCCACAAGCAG AGCCAAGGGATCGCAAAGGTGAAAGCACAGGCCCTGTTGCACCAGTCCCTCAAAGTGCACCTCAAAGAAATGAGCCGTTG TGGTGA
Upstream 100 bases:
>100_bases TCGCTGGTGATGCATGTCGACGCAGGCTTCTGATCAACAGCTTGGCCAGCGCTTTGCTCAGCTTTTAAAGCCTCGACGGC CAGTTGAGCTGCAAACGGCC
Downstream 100 bases:
>100_bases GGCAGGAAAGGAGATAAGACAGAACCGCGTCGCCTGCTAGCGCTACTCGTTCGTGATCTCGACAGTTCTTCCATTGATTG GAAGTTGCAAGCCCGGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MNLLQDLMGADVSLLPSIRLLASQPTFLQFINAKSEAGLVPQRDELLTTSHEMLAPSLVTRIASFLDGYLSARSDQAQST PPSEPQMPFKGTSTPEPSFPAVLSNSSDELPSTVVDQFAKPSSSPAADHSSSHQGGSSQIVVGLIIVLVVLTGLSAAFAL FTVPALCEPLGLCAAEEKTEEKKDRKKEDAEKPDSAAETPSTPKEKAPVEPQAEPRDRKGESTGPVAPVPQSAPQRNEPL W
Sequences:
>Translated_241_residues MNLLQDLMGADVSLLPSIRLLASQPTFLQFINAKSEAGLVPQRDELLTTSHEMLAPSLVTRIASFLDGYLSARSDQAQST PPSEPQMPFKGTSTPEPSFPAVLSNSSDELPSTVVDQFAKPSSSPAADHSSSHQGGSSQIVVGLIIVLVVLTGLSAAFAL FTVPALCEPLGLCAAEEKTEEKKDRKKEDAEKPDSAAETPSTPKEKAPVEPQAEPRDRKGESTGPVAPVPQSAPQRNEPL W >Mature_241_residues MNLLQDLMGADVSLLPSIRLLASQPTFLQFINAKSEAGLVPQRDELLTTSHEMLAPSLVTRIASFLDGYLSARSDQAQST PPSEPQMPFKGTSTPEPSFPAVLSNSSDELPSTVVDQFAKPSSSPAADHSSSHQGGSSQIVVGLIIVLVVLTGLSAAFAL FTVPALCEPLGLCAAEEKTEEKKDRKKEDAEKPDSAAETPSTPKEKAPVEPQAEPRDRKGESTGPVAPVPQSAPQRNEPL W
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25594; Mature: 25594
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLQDLMGADVSLLPSIRLLASQPTFLQFINAKSEAGLVPQRDELLTTSHEMLAPSLVT CCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHH RIASFLDGYLSARSDQAQSTPPSEPQMPFKGTSTPEPSFPAVLSNSSDELPSTVVDQFAK HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHC PSSSPAADHSSSHQGGSSQIVVGLIIVLVVLTGLSAAFALFTVPALCEPLGLCAAEEKTE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKKDRKKEDAEKPDSAAETPSTPKEKAPVEPQAEPRDRKGESTGPVAPVPQSAPQRNEPL HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC W C >Mature Secondary Structure MNLLQDLMGADVSLLPSIRLLASQPTFLQFINAKSEAGLVPQRDELLTTSHEMLAPSLVT CCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHH RIASFLDGYLSARSDQAQSTPPSEPQMPFKGTSTPEPSFPAVLSNSSDELPSTVVDQFAK HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHC PSSSPAADHSSSHQGGSSQIVVGLIIVLVVLTGLSAAFALFTVPALCEPLGLCAAEEKTE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKKDRKKEDAEKPDSAAETPSTPKEKAPVEPQAEPRDRKGESTGPVAPVPQSAPQRNEPL HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC W C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA