| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024491
Identifier: 124024491
GI number: 124024491
Start: 2469874
End: 2471475
Strand: Reverse
Name: 124024491
Synonym: P9303_28031
Alternate gene names: NA
Gene position: 2471475-2469874 (Counterclockwise)
Preceding gene: 124024492
Following gene: 124024485
Centisome position: 92.13
GC content: 52.81
Gene sequence:
>1602_bases ATGAATCAGGTCATGACATCACAGTTGAATGTCTCAGTTGCAGGGAGCGTGTGGTGGAACGGGTTGACAGCCGAACTCAA CATCACCAATACGACCAGCGAAACTCTTTCAGAATGGAGTTATAGCTTCATAACACCCCACAAAATCTCAGGGATGCCAT GGGGTGTCAGCACATCGGCCGAGCAGCTCGTCAACGGACAAACGAAATACACACTGACAGGAATCGGTTGGGCGCAAACC ATTCCGGCTGGAGGGTCCGTCACTGTCGGCTTCAATGCGCAACAGGGCAAGGCACTCGGTACAGAAGGAGTGCTGACCGC TGAATTGTTGATGACTAAAGCGTCAGAAATGGCAAGCACCGTTGCATCATCTCTTGCGGTAAGTGATGCACCAGCAGTTG AAGTGCAAGGGCATCCACAGAGCGAGAACGACTCTGCAATGGAAGGAATGCATGCACATACAACCTCCGACTCTGCTTTC ACCCTGATCACCGCCTGGGGTGCATCAAGCGGCAGTGAACACACCACCCACGATGAACTGATGGGGGGACGCACTCCCAT CACCACAGAAGCACATGTTGCGTATAACAATCTCCGCACCTTTCTCGGACTGGACCCTGCATCCCTAGAAGACATCGGCA ACTGGGCCTTCGCTAATAACCTCACCAATAACTCCCAGGCCTGGGGCGATGATCTCCAAGGTGTTGGTCTCTGGTACTCC ATGCAGGGGGCGAAAGTTGGCTGGATCGCCGATGAAAACTACGATCCACAATGGCTTGCCGATCTACAACGCAGCGCACG TCTTGGTAGCCCCAATGACGTGATGAGCATGGCGAGACAGATCGCTAAACCTGGCTTCATCGATTACCTCGAGGGCATCG ATGGCGTCGATCACTTCATCAACACTTTGAAGATGGAGCCCCATTTTGGTGGCTGGATGCACGATAGGGCTCATGGATGG CTATCAATCGAAGACGTTGCTATCGCTCATGACATCAACCACCTCACAGTGCTCAGTCATGACCAAACACAACCGTTCAT GAATGACACCTTTGATTGGCCGCAATGGCCTGCCTTAGAGGTCTCCGATCAGGTCGTCATCGACTACTTCCAAAGCATGG TGAGCCTGGGCGGCCCACTGGGATCAAACTTGGACGCTCTAGGTACACCGATAAATGAGGAGAATGAGAAACCTCAACAG GAACCAGTTGTTCTCGTTGAGCAAAGCCAGGTTTCACAGATTGATCCAATCACCGGTAGCGCGGTGGATGTTGAGGTGTC TGGTGATCTTTGGTGGGGTGGCTTCACCGCGGAGATCACCATCACCAATAGCAGTGATCAGCGTCTGGAGAATTGGGCGG TAGGCTTCAACAGTATTCATCACTATTACGGCGAGTCCTGGGGTGTTGATGTCGTTACCGAAGAGGTCGCTGATGATCTC TACAGTTATAAAATCTATGGAGCTGACTGGGGTCAGTCGATCGGAGCTGGTCAATCGATGACTGTGGGCTTCAACGCGCT AACGGGTATGGATCTGGAGCGTAGCGGTTCTCTCACCGCCGAGAGCCTATTTGCCGAGGGCAGCGAGCCTGTACTGCTCT AA
Upstream 100 bases:
>100_bases AGAGAATTCTCAGATAAAAAAAGTCTGCTTTATGGAGCAAAAATCCTTCATTTGAAGGGTTGAGTTGTAGTACACATCAC GCCTAGACCTGCATAAGCAA
Downstream 100 bases:
>100_bases CGGTTGCATAGCCTCAGCTCACTAAACAGCATCACCATTAGCGCAGCGATGGGGGGCTAACGCCAGTGGCTTGCTTTCGA GGGTAGGAGCTGCATCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MNQVMTSQLNVSVAGSVWWNGLTAELNITNTTSETLSEWSYSFITPHKISGMPWGVSTSAEQLVNGQTKYTLTGIGWAQT IPAGGSVTVGFNAQQGKALGTEGVLTAELLMTKASEMASTVASSLAVSDAPAVEVQGHPQSENDSAMEGMHAHTTSDSAF TLITAWGASSGSEHTTHDELMGGRTPITTEAHVAYNNLRTFLGLDPASLEDIGNWAFANNLTNNSQAWGDDLQGVGLWYS MQGAKVGWIADENYDPQWLADLQRSARLGSPNDVMSMARQIAKPGFIDYLEGIDGVDHFINTLKMEPHFGGWMHDRAHGW LSIEDVAIAHDINHLTVLSHDQTQPFMNDTFDWPQWPALEVSDQVVIDYFQSMVSLGGPLGSNLDALGTPINEENEKPQQ EPVVLVEQSQVSQIDPITGSAVDVEVSGDLWWGGFTAEITITNSSDQRLENWAVGFNSIHHYYGESWGVDVVTEEVADDL YSYKIYGADWGQSIGAGQSMTVGFNALTGMDLERSGSLTAESLFAEGSEPVLL
Sequences:
>Translated_533_residues MNQVMTSQLNVSVAGSVWWNGLTAELNITNTTSETLSEWSYSFITPHKISGMPWGVSTSAEQLVNGQTKYTLTGIGWAQT IPAGGSVTVGFNAQQGKALGTEGVLTAELLMTKASEMASTVASSLAVSDAPAVEVQGHPQSENDSAMEGMHAHTTSDSAF TLITAWGASSGSEHTTHDELMGGRTPITTEAHVAYNNLRTFLGLDPASLEDIGNWAFANNLTNNSQAWGDDLQGVGLWYS MQGAKVGWIADENYDPQWLADLQRSARLGSPNDVMSMARQIAKPGFIDYLEGIDGVDHFINTLKMEPHFGGWMHDRAHGW LSIEDVAIAHDINHLTVLSHDQTQPFMNDTFDWPQWPALEVSDQVVIDYFQSMVSLGGPLGSNLDALGTPINEENEKPQQ EPVVLVEQSQVSQIDPITGSAVDVEVSGDLWWGGFTAEITITNSSDQRLENWAVGFNSIHHYYGESWGVDVVTEEVADDL YSYKIYGADWGQSIGAGQSMTVGFNALTGMDLERSGSLTAESLFAEGSEPVLL >Mature_533_residues MNQVMTSQLNVSVAGSVWWNGLTAELNITNTTSETLSEWSYSFITPHKISGMPWGVSTSAEQLVNGQTKYTLTGIGWAQT IPAGGSVTVGFNAQQGKALGTEGVLTAELLMTKASEMASTVASSLAVSDAPAVEVQGHPQSENDSAMEGMHAHTTSDSAF TLITAWGASSGSEHTTHDELMGGRTPITTEAHVAYNNLRTFLGLDPASLEDIGNWAFANNLTNNSQAWGDDLQGVGLWYS MQGAKVGWIADENYDPQWLADLQRSARLGSPNDVMSMARQIAKPGFIDYLEGIDGVDHFINTLKMEPHFGGWMHDRAHGW LSIEDVAIAHDINHLTVLSHDQTQPFMNDTFDWPQWPALEVSDQVVIDYFQSMVSLGGPLGSNLDALGTPINEENEKPQQ EPVVLVEQSQVSQIDPITGSAVDVEVSGDLWWGGFTAEITITNSSDQRLENWAVGFNSIHHYYGESWGVDVVTEEVADDL YSYKIYGADWGQSIGAGQSMTVGFNALTGMDLERSGSLTAESLFAEGSEPVLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57661; Mature: 57661
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQVMTSQLNVSVAGSVWWNGLTAELNITNTTSETLSEWSYSFITPHKISGMPWGVSTSA CCCCCCCCCCEEEEEEEEECCEEEEEEECCCCHHHHHHCCCEEECCCCCCCCCCCCCCCH EQLVNGQTKYTLTGIGWAQTIPAGGSVTVGFNAQQGKALGTEGVLTAELLMTKASEMAST HHHHCCCCEEEEEECCHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH VASSLAVSDAPAVEVQGHPQSENDSAMEGMHAHTTSDSAFTLITAWGASSGSEHTTHDEL HHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHH MGGRTPITTEAHVAYNNLRTFLGLDPASLEDIGNWAFANNLTNNSQAWGDDLQGVGLWYS CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCCCCCCCCCCCCCCCEEEEE MQGAKVGWIADENYDPQWLADLQRSARLGSPNDVMSMARQIAKPGFIDYLEGIDGVDHFI ECCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCHHHHHH NTLKMEPHFGGWMHDRAHGWLSIEDVAIAHDINHLTVLSHDQTQPFMNDTFDWPQWPALE HHEECCCCCCCCCHHCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCC VSDQVVIDYFQSMVSLGGPLGSNLDALGTPINEENEKPQQEPVVLVEQSQVSQIDPITGS CCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC AVDVEVSGDLWWGGFTAEITITNSSDQRLENWAVGFNSIHHYYGESWGVDVVTEEVADDL EEEEEECCCEEECCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YSYKIYGADWGQSIGAGQSMTVGFNALTGMDLERSGSLTAESLFAEGSEPVLL HEEEEECCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCHHHHHCCCCCCCCC >Mature Secondary Structure MNQVMTSQLNVSVAGSVWWNGLTAELNITNTTSETLSEWSYSFITPHKISGMPWGVSTSA CCCCCCCCCCEEEEEEEEECCEEEEEEECCCCHHHHHHCCCEEECCCCCCCCCCCCCCCH EQLVNGQTKYTLTGIGWAQTIPAGGSVTVGFNAQQGKALGTEGVLTAELLMTKASEMAST HHHHCCCCEEEEEECCHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH VASSLAVSDAPAVEVQGHPQSENDSAMEGMHAHTTSDSAFTLITAWGASSGSEHTTHDEL HHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHH MGGRTPITTEAHVAYNNLRTFLGLDPASLEDIGNWAFANNLTNNSQAWGDDLQGVGLWYS CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCCCCCCCCCCCCCCCEEEEE MQGAKVGWIADENYDPQWLADLQRSARLGSPNDVMSMARQIAKPGFIDYLEGIDGVDHFI ECCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCHHHHHH NTLKMEPHFGGWMHDRAHGWLSIEDVAIAHDINHLTVLSHDQTQPFMNDTFDWPQWPALE HHEECCCCCCCCCHHCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCC VSDQVVIDYFQSMVSLGGPLGSNLDALGTPINEENEKPQQEPVVLVEQSQVSQIDPITGS CCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC AVDVEVSGDLWWGGFTAEITITNSSDQRLENWAVGFNSIHHYYGESWGVDVVTEEVADDL EEEEEECCCEEECCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YSYKIYGADWGQSIGAGQSMTVGFNALTGMDLERSGSLTAESLFAEGSEPVLL HEEEEECCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA