| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024481
Identifier: 124024481
GI number: 124024481
Start: 2459762
End: 2460406
Strand: Reverse
Name: 124024481
Synonym: P9303_27931
Alternate gene names: NA
Gene position: 2460406-2459762 (Counterclockwise)
Preceding gene: 124024482
Following gene: 124024479
Centisome position: 91.71
GC content: 47.44
Gene sequence:
>645_bases ATGAATGAACGCGTTGATGCCTATCAAGATCGTCTTCACTTTGCCGCAACAGAGAGGAACCGTGATGCAATTGCTGCTGT TCTGAGCAAAGTGCTGCCGAGCGATGGGAGAGTGTTGGAACTTGCAAGTGGCAGTGGCGAACATGCCGTTGCTTTTCAAA AATTGTTCCCAAAGCTCATTTGGCACTGCAGCGATATTGATCCAATGCATCTTCGCAGTATCAATGCTTGGATCCATTTT GAGCAGCTTGCACAGACCATGCCCCCACCCCTCAAGATCGATGTCAACGCGCGTCCCTGGCAACTGCCTGATGGATTAAC GGATCATCTTTGCGGGGTTATTTGCATTAATATGATTCATATCTCTCCTTGGAAGTGTTGTGAATCTTTAGTCCAAGAAG CTGCTCAATTACTGGGCAACTCTGCACCTCTAATTCTCTATGGGCCATACAAGCGTAATGGTCTACACACGAGTGAAAGT AATGCCAGATTTGATGATTATCTGCGCCAGCAAGATCCAAGTTGGGGAGTGCGTGAACTCGAAGATGTAGAACGTCTTGG TGTCAGTTCAGGCCTCTTGTTGAATGAGGTGATTGAAATGCCTGCCAACAACCTCTCCTTGATCTTCACGCCTAGGCGAT CATGA
Upstream 100 bases:
>100_bases CAATGCCGCTTCGAGCCGAACCCTCATCAGCAGGGGAGCTTTTCCCTCATCTTTTTGGAGTCCTGCCTTTGAGTGCTGTA GAACTTGTGGAAACTTATCC
Downstream 100 bases:
>100_bases CTTGATCACGCCAATCAAGACATCCTATCTCTACCGCTGACGGCAATGCAGAAGATTTACGCCAACCAAAACTCAAGGGA TCAGTTCGTCTTCATTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MNERVDAYQDRLHFAATERNRDAIAAVLSKVLPSDGRVLELASGSGEHAVAFQKLFPKLIWHCSDIDPMHLRSINAWIHF EQLAQTMPPPLKIDVNARPWQLPDGLTDHLCGVICINMIHISPWKCCESLVQEAAQLLGNSAPLILYGPYKRNGLHTSES NARFDDYLRQQDPSWGVRELEDVERLGVSSGLLLNEVIEMPANNLSLIFTPRRS
Sequences:
>Translated_214_residues MNERVDAYQDRLHFAATERNRDAIAAVLSKVLPSDGRVLELASGSGEHAVAFQKLFPKLIWHCSDIDPMHLRSINAWIHF EQLAQTMPPPLKIDVNARPWQLPDGLTDHLCGVICINMIHISPWKCCESLVQEAAQLLGNSAPLILYGPYKRNGLHTSES NARFDDYLRQQDPSWGVRELEDVERLGVSSGLLLNEVIEMPANNLSLIFTPRRS >Mature_214_residues MNERVDAYQDRLHFAATERNRDAIAAVLSKVLPSDGRVLELASGSGEHAVAFQKLFPKLIWHCSDIDPMHLRSINAWIHF EQLAQTMPPPLKIDVNARPWQLPDGLTDHLCGVICINMIHISPWKCCESLVQEAAQLLGNSAPLILYGPYKRNGLHTSES NARFDDYLRQQDPSWGVRELEDVERLGVSSGLLLNEVIEMPANNLSLIFTPRRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=199, Percent_Identity=45.2261306532663, Blast_Score=142, Evalue=2e-34, Organism=Homo sapiens, GI93102391, Length=138, Percent_Identity=43.4782608695652, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI93102401, Length=183, Percent_Identity=36.6120218579235, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71998087, Length=200, Percent_Identity=36, Blast_Score=116, Evalue=7e-27, Organism=Drosophila melanogaster, GI28574095, Length=207, Percent_Identity=32.8502415458937, Blast_Score=120, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24103; Mature: 24103
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNERVDAYQDRLHFAATERNRDAIAAVLSKVLPSDGRVLELASGSGEHAVAFQKLFPKLI CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH WHCSDIDPMHLRSINAWIHFEQLAQTMPPPLKIDVNARPWQLPDGLTDHLCGVICINMIH HHCCCCCHHHHHHHHHHEEHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHC ISPWKCCESLVQEAAQLLGNSAPLILYGPYKRNGLHTSESNARFDDYLRQQDPSWGVREL CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHH EDVERLGVSSGLLLNEVIEMPANNLSLIFTPRRS HHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCC >Mature Secondary Structure MNERVDAYQDRLHFAATERNRDAIAAVLSKVLPSDGRVLELASGSGEHAVAFQKLFPKLI CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH WHCSDIDPMHLRSINAWIHFEQLAQTMPPPLKIDVNARPWQLPDGLTDHLCGVICINMIH HHCCCCCHHHHHHHHHHEEHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHC ISPWKCCESLVQEAAQLLGNSAPLILYGPYKRNGLHTSESNARFDDYLRQQDPSWGVREL CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHH EDVERLGVSSGLLLNEVIEMPANNLSLIFTPRRS HHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA