| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024470
Identifier: 124024470
GI number: 124024470
Start: 2447914
End: 2448651
Strand: Reverse
Name: 124024470
Synonym: P9303_27821
Alternate gene names: NA
Gene position: 2448651-2447914 (Counterclockwise)
Preceding gene: 124024477
Following gene: 124024460
Centisome position: 91.28
GC content: 50.68
Gene sequence:
>738_bases ATGTCGCGAACCTCCCCCGAGCTCCTCATGGCATTGAGAAAGCCAGGCAACAGGCTGTTGGTTTTAGGTCTTGGTTTATT CACTTTGCTGACGACCTTGCCAGCAATCTCCAAAACGATTTTCAATAGTCAGCCTCTCAACCAAGAACGCTTGGTCGTGT TGGCTCAGGCAGTGGGAGGAAATCGCTGGAAACTGCTCGTACTCGAACAAATCAAGCCTCTGCCACTGTGCTGGCAAACC CGTCCAGACGGATTGGTCAACCCAACCCTTAATAACTTCAACTTTGCAGGAATCTGCAATCGTTACTTAGACAGCAATGG CTATTCCTTGCGAAGTAGCGGCGAAGACGTGGCTCACAGCTTTCGGCTGCGAATCAAACAAAGCCGAGACCATCTGGAAC TAAAAGCCCTCGATCCTGCGCGGTCGGTTCCAATTACCGTTGCCAGCGCAATACTTCCTCAACGCAATCGTGATGCGTTT GTGAAATTAAACTTGGAACCCGGTTGGAAGCTGGAGCGTCGCATATACCAAGGACGCAAACTCAGCCACGTCTACTTTGC TCATCCAGATCCTGTGAACCTCTTAATTGCCAAAGCATCAGCTCATCAAGGACCTTCCGTCTTCAATCAGCTAGGAGCTC CCAAGGCACCACTCCCTCCCCCAATTTCAATAGCCAACAACAGCGTCATACATGGCAAGGGCCCCATTCGACTCCTTGTG ATTCCTTATCGTCCGTGA
Upstream 100 bases:
>100_bases AGTGGCAGCAGCAACAACCCGTCCACGACCATCAGCCATTTGAGAAGTCTGTTGTTGTTTGGTACAACACGGTTCGCTTG GTTCTTAGTAATTAGACCCT
Downstream 100 bases:
>100_bases CGCAGGCCACTGCAGAGAGGACAGTTGAATTAGCGCCCCTTAATACTAGTAACTCTATAGATTGCCTTATATCATTAACA TTGTGAGGGGTGCGAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSRTSPELLMALRKPGNRLLVLGLGLFTLLTTLPAISKTIFNSQPLNQERLVVLAQAVGGNRWKLLVLEQIKPLPLCWQT RPDGLVNPTLNNFNFAGICNRYLDSNGYSLRSSGEDVAHSFRLRIKQSRDHLELKALDPARSVPITVASAILPQRNRDAF VKLNLEPGWKLERRIYQGRKLSHVYFAHPDPVNLLIAKASAHQGPSVFNQLGAPKAPLPPPISIANNSVIHGKGPIRLLV IPYRP
Sequences:
>Translated_245_residues MSRTSPELLMALRKPGNRLLVLGLGLFTLLTTLPAISKTIFNSQPLNQERLVVLAQAVGGNRWKLLVLEQIKPLPLCWQT RPDGLVNPTLNNFNFAGICNRYLDSNGYSLRSSGEDVAHSFRLRIKQSRDHLELKALDPARSVPITVASAILPQRNRDAF VKLNLEPGWKLERRIYQGRKLSHVYFAHPDPVNLLIAKASAHQGPSVFNQLGAPKAPLPPPISIANNSVIHGKGPIRLLV IPYRP >Mature_244_residues SRTSPELLMALRKPGNRLLVLGLGLFTLLTTLPAISKTIFNSQPLNQERLVVLAQAVGGNRWKLLVLEQIKPLPLCWQTR PDGLVNPTLNNFNFAGICNRYLDSNGYSLRSSGEDVAHSFRLRIKQSRDHLELKALDPARSVPITVASAILPQRNRDAFV KLNLEPGWKLERRIYQGRKLSHVYFAHPDPVNLLIAKASAHQGPSVFNQLGAPKAPLPPPISIANNSVIHGKGPIRLLVI PYRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27213; Mature: 27082
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTSPELLMALRKPGNRLLVLGLGLFTLLTTLPAISKTIFNSQPLNQERLVVLAQAVGG CCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCC NRWKLLVLEQIKPLPLCWQTRPDGLVNPTLNNFNFAGICNRYLDSNGYSLRSSGEDVAHS CCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCHHHHHH FRLRIKQSRDHLELKALDPARSVPITVASAILPQRNRDAFVKLNLEPGWKLERRIYQGRK HHHHEECCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCC LSHVYFAHPDPVNLLIAKASAHQGPSVFNQLGAPKAPLPPPISIANNSVIHGKGPIRLLV EEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEE IPYRP EECCC >Mature Secondary Structure SRTSPELLMALRKPGNRLLVLGLGLFTLLTTLPAISKTIFNSQPLNQERLVVLAQAVGG CCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCC NRWKLLVLEQIKPLPLCWQTRPDGLVNPTLNNFNFAGICNRYLDSNGYSLRSSGEDVAHS CCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCHHHHHH FRLRIKQSRDHLELKALDPARSVPITVASAILPQRNRDAFVKLNLEPGWKLERRIYQGRK HHHHEECCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCC LSHVYFAHPDPVNLLIAKASAHQGPSVFNQLGAPKAPLPPPISIANNSVIHGKGPIRLLV EEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEE IPYRP EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA