| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124024439
Identifier: 124024439
GI number: 124024439
Start: 2422397
End: 2423413
Strand: Reverse
Name: 124024439
Synonym: P9303_27511
Alternate gene names: NA
Gene position: 2423413-2422397 (Counterclockwise)
Preceding gene: 124024440
Following gene: 124024437
Centisome position: 90.34
GC content: 49.66
Gene sequence:
>1017_bases GTGCAGCGTTCCCTTCGTCTTCCTCTGTCGCTCACTGGTGCTGCTGCTCTTGCCTTAGCCAATACTCCGATTCAGCCAGT TGCTGCTCAAGAGAAAGACGGCAGTGCCGCAGATCTCGGCGTGATGGAGATCAACCTCAAAGACGCTGTGCAGTTCAATT GGGGATTCCAAGGTGCCCTACAAGGAGCAGGCACACCCAATCAAGCCGGTATTGGTGCCTTCCTTCCGATTGCCGTTGGT GAGAACAGCGTTTGGTTTATTGATGCTCTAGCCAATGCCAACTTTGCTGATCGTGATGGAGAAAGCAGCATCGTTAATAC CGATGTCGCGGGTACCACGATCAGCACCTCAACCAGGCTTGGTTATCGCTGGCTCAATGGTGATCGCAGCTGGATGTATG GAGTGAATGCTGGCTATGACAGCCGGCCAATGAATACAGGTGATGCTGATACCAGCGTCAATGTTTTTGACAAGCGTGAT GTCTTCTTCTCTCAAGTTGCTGCAGGCTTAGAAGCAGTCTCAGACACTTGGAACTTCAATGCCTATGCACTGGTTCCAAT CGGTGATGACGAACACAGGCTGAACAGCCAGTACGAAGCTGGGGCTTTAGATACCTACGGATTAGATGTTGGCTACAGCA TCACACCAGATCTCAATGCTTTTGTTGGTTACTACTACCACAGTGGTGATGTCGGTGAAGCCGATGGTTCTGGTGTTAAA GGAAGGCTGGCTTACCACATCAGCAATGGTTTAACTCTTGGTGCAAATCTCTCATATGACGAGGCTTTTGATACACGCTT TACGGCAGATATTAAATATCGCTTTGGCAGTAATGGCTATGGAGCACCTAGCAAGAAAGAGCCAGCAGTGATGCCTGCAA TTCAAGCGTTATCTGCAACACCAGCCAATCGGGACGTAAGGGTGGGGGACGGGTGTTTTTATGTAAATGGTGTGTATAAA TGCTTTGATGTGAAGACAGAGCCGAGCGGGGGTATCTGCGACGGTACTTTCTGTTGA
Upstream 100 bases:
>100_bases CTGTTGACCTGGTGAGATCGAGTACTTCAGTTGATGTCTGCTGATAGATGAAACCAGAGACCTCCCAGATAATTAGTGAC CTTTTAAGCGTTCAATCCCA
Downstream 100 bases:
>100_bases TGTGATTGGTAGCGAATGACTGTTTGGATGTGTAGATGTTTGAAGCATAGCTTATCTAAGTCCCCTCCAATCGCTGGGGC TTTTTGTTTCTTAAAATACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MQRSLRLPLSLTGAAALALANTPIQPVAAQEKDGSAADLGVMEINLKDAVQFNWGFQGALQGAGTPNQAGIGAFLPIAVG ENSVWFIDALANANFADRDGESSIVNTDVAGTTISTSTRLGYRWLNGDRSWMYGVNAGYDSRPMNTGDADTSVNVFDKRD VFFSQVAAGLEAVSDTWNFNAYALVPIGDDEHRLNSQYEAGALDTYGLDVGYSITPDLNAFVGYYYHSGDVGEADGSGVK GRLAYHISNGLTLGANLSYDEAFDTRFTADIKYRFGSNGYGAPSKKEPAVMPAIQALSATPANRDVRVGDGCFYVNGVYK CFDVKTEPSGGICDGTFC
Sequences:
>Translated_338_residues MQRSLRLPLSLTGAAALALANTPIQPVAAQEKDGSAADLGVMEINLKDAVQFNWGFQGALQGAGTPNQAGIGAFLPIAVG ENSVWFIDALANANFADRDGESSIVNTDVAGTTISTSTRLGYRWLNGDRSWMYGVNAGYDSRPMNTGDADTSVNVFDKRD VFFSQVAAGLEAVSDTWNFNAYALVPIGDDEHRLNSQYEAGALDTYGLDVGYSITPDLNAFVGYYYHSGDVGEADGSGVK GRLAYHISNGLTLGANLSYDEAFDTRFTADIKYRFGSNGYGAPSKKEPAVMPAIQALSATPANRDVRVGDGCFYVNGVYK CFDVKTEPSGGICDGTFC >Mature_338_residues MQRSLRLPLSLTGAAALALANTPIQPVAAQEKDGSAADLGVMEINLKDAVQFNWGFQGALQGAGTPNQAGIGAFLPIAVG ENSVWFIDALANANFADRDGESSIVNTDVAGTTISTSTRLGYRWLNGDRSWMYGVNAGYDSRPMNTGDADTSVNVFDKRD VFFSQVAAGLEAVSDTWNFNAYALVPIGDDEHRLNSQYEAGALDTYGLDVGYSITPDLNAFVGYYYHSGDVGEADGSGVK GRLAYHISNGLTLGANLSYDEAFDTRFTADIKYRFGSNGYGAPSKKEPAVMPAIQALSATPANRDVRVGDGCFYVNGVYK CFDVKTEPSGGICDGTFC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35947; Mature: 35947
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRSLRLPLSLTGAAALALANTPIQPVAAQEKDGSAADLGVMEINLKDAVQFNWGFQGAL CCCCEECCEEECCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEHHHEEEECCCCCEEE QGAGTPNQAGIGAFLPIAVGENSVWFIDALANANFADRDGESSIVNTDVAGTTISTSTRL CCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCEEECCCEE GYRWLNGDRSWMYGVNAGYDSRPMNTGDADTSVNVFDKRDVFFSQVAAGLEAVSDTWNFN EEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCC AYALVPIGDDEHRLNSQYEAGALDTYGLDVGYSITPDLNAFVGYYYHSGDVGEADGSGVK EEEEEEECCCHHHCCCCCCCCCCEEECCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCC GRLAYHISNGLTLGANLSYDEAFDTRFTADIKYRFGSNGYGAPSKKEPAVMPAIQALSAT EEEEEEECCCEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCC PANRDVRVGDGCFYVNGVYKCFDVKTEPSGGICDGTFC CCCCCEEECCCEEEECCEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MQRSLRLPLSLTGAAALALANTPIQPVAAQEKDGSAADLGVMEINLKDAVQFNWGFQGAL CCCCEECCEEECCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEHHHEEEECCCCCEEE QGAGTPNQAGIGAFLPIAVGENSVWFIDALANANFADRDGESSIVNTDVAGTTISTSTRL CCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCEEECCCEE GYRWLNGDRSWMYGVNAGYDSRPMNTGDADTSVNVFDKRDVFFSQVAAGLEAVSDTWNFN EEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCC AYALVPIGDDEHRLNSQYEAGALDTYGLDVGYSITPDLNAFVGYYYHSGDVGEADGSGVK EEEEEEECCCHHHCCCCCCCCCCEEECCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCC GRLAYHISNGLTLGANLSYDEAFDTRFTADIKYRFGSNGYGAPSKKEPAVMPAIQALSAT EEEEEEECCCEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCC PANRDVRVGDGCFYVNGVYKCFDVKTEPSGGICDGTFC CCCCCEEECCCEEEECCEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA