| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024404
Identifier: 124024404
GI number: 124024404
Start: 2394312
End: 2394926
Strand: Reverse
Name: 124024404
Synonym: P9303_27161
Alternate gene names: NA
Gene position: 2394926-2394312 (Counterclockwise)
Preceding gene: 124024405
Following gene: 124024401
Centisome position: 89.27
GC content: 44.23
Gene sequence:
>615_bases GTGATCGTTGAATCCCCAAGAGCTCGTGACTTGTTGATGTTGAAGCGTGGGTTGCTGATTGCATGCTCTTTGATGGGAAT TGCAGGTTGCTCTTTGAATTCTGTGCGCCAGCATGAAGTGTTGCAGCCTGAAAGATTGGACCTGCAATTATTAGTCTGCA AAATAAAATCTACGTTTTTCTCTGATGTAAACCAGGACGGACAAATTTCAGTTGGAGATCATATGACATATGTTTTTAAT GTTTCTGAGGATGATACTTGTGCTCAGTCGCAATCAACCTTTTATGCTGTTGAGCAGATTGTGATGAGGCAGGATTTGGG GCATGATCGGCAGCAGACTTTTGTGACTCATTTTCAGGGAACTTTTAGGTTGAAGAAAGGCAATCTTCAGTTGCGAGGCC TGGGTTCTCTTGGTTTAAGCGCTAGCAAGTGGAAAGCTATCAATCAATCCGGTTCTATTGATCTTGTGCTTGCCAACATC TTTCCTGAGAGCCATAGGCTTTCAGTTATTGGCGAGGGCGGTTCTTACACTGGGCTGGTGGGCACCGCATTTGTCAAGCC TGGAGATGCAGTGGTAGTTGATATTAACTTGTTCAGCCAATTCAAGCTTGATTGA
Upstream 100 bases:
>100_bases TGTGCCCTACCGCAACCGTCTGCATGGCTTCACAGCCTGCTCGCCGCGGCGCCTCCAGATGAAGACAGAAAGATGAGCGG CGCCTATTTCACCAGTTAGG
Downstream 100 bases:
>100_bases GTTTAATAGATATTGTCTTTCCCTATTGCTTTTGCCAGAAGATTTGGCTGTGATTTTAAATTTTCTTGAACTCAATCAGT CGTGAAAAGTAGAATGGAGC
Product: dockerin repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MIVESPRARDLLMLKRGLLIACSLMGIAGCSLNSVRQHEVLQPERLDLQLLVCKIKSTFFSDVNQDGQISVGDHMTYVFN VSEDDTCAQSQSTFYAVEQIVMRQDLGHDRQQTFVTHFQGTFRLKKGNLQLRGLGSLGLSASKWKAINQSGSIDLVLANI FPESHRLSVIGEGGSYTGLVGTAFVKPGDAVVVDINLFSQFKLD
Sequences:
>Translated_204_residues MIVESPRARDLLMLKRGLLIACSLMGIAGCSLNSVRQHEVLQPERLDLQLLVCKIKSTFFSDVNQDGQISVGDHMTYVFN VSEDDTCAQSQSTFYAVEQIVMRQDLGHDRQQTFVTHFQGTFRLKKGNLQLRGLGSLGLSASKWKAINQSGSIDLVLANI FPESHRLSVIGEGGSYTGLVGTAFVKPGDAVVVDINLFSQFKLD >Mature_204_residues MIVESPRARDLLMLKRGLLIACSLMGIAGCSLNSVRQHEVLQPERLDLQLLVCKIKSTFFSDVNQDGQISVGDHMTYVFN VSEDDTCAQSQSTFYAVEQIVMRQDLGHDRQQTFVTHFQGTFRLKKGNLQLRGLGSLGLSASKWKAINQSGSIDLVLANI FPESHRLSVIGEGGSYTGLVGTAFVKPGDAVVVDINLFSQFKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22452; Mature: 22452
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVESPRARDLLMLKRGLLIACSLMGIAGCSLNSVRQHEVLQPERLDLQLLVCKIKSTFF CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEEEHHHHHHH SDVNQDGQISVGDHMTYVFNVSEDDTCAQSQSTFYAVEQIVMRQDLGHDRQQTFVTHFQG HCCCCCCCEEECCCEEEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCCCHHHHHHEECCE TFRLKKGNLQLRGLGSLGLSASKWKAINQSGSIDLVLANIFPESHRLSVIGEGGSYTGLV EEEEECCCEEEEECCCCCCCHHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEE GTAFVKPGDAVVVDINLFSQFKLD EEEEECCCCEEEEEEEEEEEEECC >Mature Secondary Structure MIVESPRARDLLMLKRGLLIACSLMGIAGCSLNSVRQHEVLQPERLDLQLLVCKIKSTFF CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEEEHHHHHHH SDVNQDGQISVGDHMTYVFNVSEDDTCAQSQSTFYAVEQIVMRQDLGHDRQQTFVTHFQG HCCCCCCCEEECCCEEEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCCCHHHHHHEECCE TFRLKKGNLQLRGLGSLGLSASKWKAINQSGSIDLVLANIFPESHRLSVIGEGGSYTGLV EEEEECCCEEEEECCCCCCCHHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEE GTAFVKPGDAVVVDINLFSQFKLD EEEEECCCCEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA