| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024392
Identifier: 124024392
GI number: 124024392
Start: 2386134
End: 2387207
Strand: Reverse
Name: 124024392
Synonym: P9303_27041
Alternate gene names: NA
Gene position: 2387207-2386134 (Counterclockwise)
Preceding gene: 124024393
Following gene: 124024390
Centisome position: 88.99
GC content: 48.88
Gene sequence:
>1074_bases GTGCAGCATTCCCTACGCCTCTCCTTATCGCTCACTGGTGCTGCTGCTCTTGCTCTAGCTGGTTCTCCATTTCAACCAGT CGCTGCTCAAGAAGACGGCAGTGCTGCAGATCTCGGTGTGATGGAGATCAACCTCAAAGATGCTGTTCAGTTCAATTGGG GATTCCAAGGTGCACTGCAAGGAGCAGGCACACCCAATCAAGCCGGTATTGGCGCCTTCCTCCCGATTGCCGTTGGTGAG AACAGTGTTTGGTTTATCGATGTTTTAGCCAATGCCAACTTTGCTGATTACGGCGGCAACAGCAGCATCGTCAATACAGA AGTTGCTGGCACCACGATCAGCACCTCTTCAAGGCTTGGTTATCGCTGGCTGAACAGCGACCGCAGCTGGATGTATGGCA TCAACGCTGGTTATGACAGCCGGCCGATGAATACAGGTAATGCTGATTCAGGTGTCACCCTCTACGACAAGGAAAGTGCT TTCTTTCAGCAAATCTCAGCAGGATTAGAAGCGGTCTCTGATACCTGGAACTTCAATGCCTATGCCCTGATCCCTGTTGG TGATACAGAGCAAAGCCTCAATGTGCGTTATCTCGGCGGGGCGCTTGATACCTATGGCCTGGATGTTGGTTATTTCATCA CCCCTGAACTCAATGCTTCTGTTGGTTATTACTACCAGCAAGGTGATCTGGATGATGCTGATGGTTCTGGCGTGCAGGTG GAGCTGGATTATCAGATCGCTGATGGCTTAACCGCTGGCATCAATGTTTCCTATGACGAAGCCTTTGAAACCAGAGTTTC AGGAAACATTGAATATCGATTTGGTAGTAATAGTTCAGCATCAATCAGTGAGAAGAAAGCATGGGAGGCGCCAACGATAA AAGCATTATCTGAAAGCGTTAAAAACAGAAATATCCGCGTTCATGATGGAGCAGATCCAAATGCGAAGTGCAAGTCTCCA GAAGGGCATCTTACAGACATCTTTTTAGGGGGCATATTTAATACCATTCGATTTCATTGTAGCCCTGGCGCGACTAATGC TGCAACTACGGGCTGGTTGCGAACGGGCTACTAG
Upstream 100 bases:
>100_bases TCTAGGAATTTTCCTTGCCTGCCAACCCAACGACTGCCTCACGCTCTGCTCTGCAAGCCAGTTTTCAAACGAGTATGAGC TGATCAGTTAGTCACTCCCA
Downstream 100 bases:
>100_bases ATCCGTGGTCATCATTTCATACTTAAAACCCTCTTGAGTACTGACCCATCTAGGATTTAATATCTCATCAAAACGCCCAT GCAAGCAGCCAATTAACTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MQHSLRLSLSLTGAAALALAGSPFQPVAAQEDGSAADLGVMEINLKDAVQFNWGFQGALQGAGTPNQAGIGAFLPIAVGE NSVWFIDVLANANFADYGGNSSIVNTEVAGTTISTSSRLGYRWLNSDRSWMYGINAGYDSRPMNTGNADSGVTLYDKESA FFQQISAGLEAVSDTWNFNAYALIPVGDTEQSLNVRYLGGALDTYGLDVGYFITPELNASVGYYYQQGDLDDADGSGVQV ELDYQIADGLTAGINVSYDEAFETRVSGNIEYRFGSNSSASISEKKAWEAPTIKALSESVKNRNIRVHDGADPNAKCKSP EGHLTDIFLGGIFNTIRFHCSPGATNAATTGWLRTGY
Sequences:
>Translated_357_residues MQHSLRLSLSLTGAAALALAGSPFQPVAAQEDGSAADLGVMEINLKDAVQFNWGFQGALQGAGTPNQAGIGAFLPIAVGE NSVWFIDVLANANFADYGGNSSIVNTEVAGTTISTSSRLGYRWLNSDRSWMYGINAGYDSRPMNTGNADSGVTLYDKESA FFQQISAGLEAVSDTWNFNAYALIPVGDTEQSLNVRYLGGALDTYGLDVGYFITPELNASVGYYYQQGDLDDADGSGVQV ELDYQIADGLTAGINVSYDEAFETRVSGNIEYRFGSNSSASISEKKAWEAPTIKALSESVKNRNIRVHDGADPNAKCKSP EGHLTDIFLGGIFNTIRFHCSPGATNAATTGWLRTGY >Mature_357_residues MQHSLRLSLSLTGAAALALAGSPFQPVAAQEDGSAADLGVMEINLKDAVQFNWGFQGALQGAGTPNQAGIGAFLPIAVGE NSVWFIDVLANANFADYGGNSSIVNTEVAGTTISTSSRLGYRWLNSDRSWMYGINAGYDSRPMNTGNADSGVTLYDKESA FFQQISAGLEAVSDTWNFNAYALIPVGDTEQSLNVRYLGGALDTYGLDVGYFITPELNASVGYYYQQGDLDDADGSGVQV ELDYQIADGLTAGINVSYDEAFETRVSGNIEYRFGSNSSASISEKKAWEAPTIKALSESVKNRNIRVHDGADPNAKCKSP EGHLTDIFLGGIFNTIRFHCSPGATNAATTGWLRTGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38040; Mature: 38040
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHSLRLSLSLTGAAALALAGSPFQPVAAQEDGSAADLGVMEINLKDAVQFNWGFQGALQ CCCEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHHEEEECCCCCEEEC GAGTPNQAGIGAFLPIAVGENSVWFIDVLANANFADYGGNSSIVNTEVAGTTISTSSRLG CCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCEECCCCCCCEEEEEECCEEEECCCCCC YRWLNSDRSWMYGINAGYDSRPMNTGNADSGVTLYDKESAFFQQISAGLEAVSDTWNFNA EEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCE YALIPVGDTEQSLNVRYLGGALDTYGLDVGYFITPELNASVGYYYQQGDLDDADGSGVQV EEEEECCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCEEE ELDYQIADGLTAGINVSYDEAFETRVSGNIEYRFGSNSSASISEKKAWEAPTIKALSESV EEEEEEECCCEECEECCHHHHHHHHHCCEEEEEECCCCCCCCCHHHCCCCCHHHHHHHHH KNRNIRVHDGADPNAKCKSPEGHLTDIFLGGIFNTIRFHCSPGATNAATTGWLRTGY HCCCEEEECCCCCCCCCCCCCCCEEEEEHHHHCEEEEEEECCCCCCCCCCCEEECCC >Mature Secondary Structure MQHSLRLSLSLTGAAALALAGSPFQPVAAQEDGSAADLGVMEINLKDAVQFNWGFQGALQ CCCEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHHEEEECCCCCEEEC GAGTPNQAGIGAFLPIAVGENSVWFIDVLANANFADYGGNSSIVNTEVAGTTISTSSRLG CCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCEECCCCCCCEEEEEECCEEEECCCCCC YRWLNSDRSWMYGINAGYDSRPMNTGNADSGVTLYDKESAFFQQISAGLEAVSDTWNFNA EEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCE YALIPVGDTEQSLNVRYLGGALDTYGLDVGYFITPELNASVGYYYQQGDLDDADGSGVQV EEEEECCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCEEE ELDYQIADGLTAGINVSYDEAFETRVSGNIEYRFGSNSSASISEKKAWEAPTIKALSESV EEEEEEECCCEECEECCHHHHHHHHHCCEEEEEECCCCCCCCCHHHCCCCCHHHHHHHHH KNRNIRVHDGADPNAKCKSPEGHLTDIFLGGIFNTIRFHCSPGATNAATTGWLRTGY HCCCEEEECCCCCCCCCCCCCCCEEEEEHHHHCEEEEEEECCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA