| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024386
Identifier: 124024386
GI number: 124024386
Start: 2381108
End: 2382088
Strand: Reverse
Name: 124024386
Synonym: P9303_26981
Alternate gene names: NA
Gene position: 2382088-2381108 (Counterclockwise)
Preceding gene: 124024390
Following gene: 124024383
Centisome position: 88.8
GC content: 49.34
Gene sequence:
>981_bases GTGCAGCGTTCCCTTCGTCTCTCCTTGTCGCTCACTGGTGCTGCTGCTCTTGCCTTAGCTAGCACTCCCATCCAGCCAGT AGCGGCTCAAGAAGACGACGGGAATGCAGCAGATCTTGGGGTGATGGAGATCAATCTCAAAGACGCTGTGCAGTTCAACT GGGGCTTTCAAGGTGCACTACAAGGAGCTGGAACTCCTAACCAGGCAGGTATTGGCGCGTTTCTGCCGATTGCTGTTGGT GAGAACAGCGTTTGGTTTATTGATGCTCTAGCCAATGCCAACTTCGCTGATCGTGAGGGTGAAAGCAGCATTGTTAATAC CGATGTCGCTGGTACCACGATCAGCACCTCAACCCGTTTGGGGTATCGCTGGCTCAATGGTGATCGCAGCTGGATGTATG GCATCAATGCTGGCTATGACAGCCGGCCGATGAATACAGGAGATGCGGATACAGGCGTGACTGTCTGGAACAAAGACGAT GTCTTCTTCCAGCAGATAGCAGCAGGTCTAGAAGCAGTTAGTGAGACCTGGAACTTCAATGCCTATGGCCTCTTCCCTAT TGGTGATACAGAACAAAGCCTGAATAGCCACTACCGCGGTGGTGCTCTACACACCTACGGCTTAGATGTTGGCTATTCCA TTACCCCGCAGTGGAATGCCTCAGTTGGTTATTACTACCAACATGGTGATGATCTGACAGAAGACGATGGGTCTGGTGTT AAAGGAAGACTGGCTTACAACATCAGCAATGGTTTAACGCTTGGCGCCAATCTTTCTTACGATGAAGCCTTTGATACTCG CTTTACAGCAGACATTAAATATCGCTTTGGCAGCAATGGTTATGGAGCACCAAGTAGCAAGAAAAAATGGAAGACTCCTG CTATAGAAGCGTTATCTGCAACACCAGCTAATCGGGATGTGAGGGTGCACGATTCGACGAAAACCAACACAACAACCATA CCAACCAACTCAAACTTATAA
Upstream 100 bases:
>100_bases CATCATTATTAGGGAATAGCAGCAAAGCTGAAACTGCCTACTGCAGCGGGCAGCAGCAGGAAAAGCAAGGCAAACACCTC TTCTATTGAAGCCCTTATCA
Downstream 100 bases:
>100_bases CTTAGAGCATAGATCTCCTCCTGTGCTATCTAACGATAAATGCCCAATCGGGATACAATGCTTGTGAATGAGCAGTGGCT TTTGGGCCCTGTAATTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MQRSLRLSLSLTGAAALALASTPIQPVAAQEDDGNAADLGVMEINLKDAVQFNWGFQGALQGAGTPNQAGIGAFLPIAVG ENSVWFIDALANANFADREGESSIVNTDVAGTTISTSTRLGYRWLNGDRSWMYGINAGYDSRPMNTGDADTGVTVWNKDD VFFQQIAAGLEAVSETWNFNAYGLFPIGDTEQSLNSHYRGGALHTYGLDVGYSITPQWNASVGYYYQHGDDLTEDDGSGV KGRLAYNISNGLTLGANLSYDEAFDTRFTADIKYRFGSNGYGAPSSKKKWKTPAIEALSATPANRDVRVHDSTKTNTTTI PTNSNL
Sequences:
>Translated_326_residues MQRSLRLSLSLTGAAALALASTPIQPVAAQEDDGNAADLGVMEINLKDAVQFNWGFQGALQGAGTPNQAGIGAFLPIAVG ENSVWFIDALANANFADREGESSIVNTDVAGTTISTSTRLGYRWLNGDRSWMYGINAGYDSRPMNTGDADTGVTVWNKDD VFFQQIAAGLEAVSETWNFNAYGLFPIGDTEQSLNSHYRGGALHTYGLDVGYSITPQWNASVGYYYQHGDDLTEDDGSGV KGRLAYNISNGLTLGANLSYDEAFDTRFTADIKYRFGSNGYGAPSSKKKWKTPAIEALSATPANRDVRVHDSTKTNTTTI PTNSNL >Mature_326_residues MQRSLRLSLSLTGAAALALASTPIQPVAAQEDDGNAADLGVMEINLKDAVQFNWGFQGALQGAGTPNQAGIGAFLPIAVG ENSVWFIDALANANFADREGESSIVNTDVAGTTISTSTRLGYRWLNGDRSWMYGINAGYDSRPMNTGDADTGVTVWNKDD VFFQQIAAGLEAVSETWNFNAYGLFPIGDTEQSLNSHYRGGALHTYGLDVGYSITPQWNASVGYYYQHGDDLTEDDGSGV KGRLAYNISNGLTLGANLSYDEAFDTRFTADIKYRFGSNGYGAPSSKKKWKTPAIEALSATPANRDVRVHDSTKTNTTTI PTNSNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34989; Mature: 34989
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRSLRLSLSLTGAAALALASTPIQPVAAQEDDGNAADLGVMEINLKDAVQFNWGFQGAL CCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEHHHEEEECCCCCEEE QGAGTPNQAGIGAFLPIAVGENSVWFIDALANANFADREGESSIVNTDVAGTTISTSTRL CCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCEEECCCEE GYRWLNGDRSWMYGINAGYDSRPMNTGDADTGVTVWNKDDVFFQQIAAGLEAVSETWNFN EEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCC AYGLFPIGDTEQSLNSHYRGGALHTYGLDVGYSITPQWNASVGYYYQHGDDLTEDDGSGV CEEEEECCCCHHHHHHHCCCCEEEEEECCCCEEECCCCCCCEEEEEECCCCCCCCCCCCC KGRLAYNISNGLTLGANLSYDEAFDTRFTADIKYRFGSNGYGAPSSKKKWKTPAIEALSA EEEEEEEECCCEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHCC TPANRDVRVHDSTKTNTTTIPTNSNL CCCCCEEEEECCCCCCCEECCCCCCC >Mature Secondary Structure MQRSLRLSLSLTGAAALALASTPIQPVAAQEDDGNAADLGVMEINLKDAVQFNWGFQGAL CCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEHHHEEEECCCCCEEE QGAGTPNQAGIGAFLPIAVGENSVWFIDALANANFADREGESSIVNTDVAGTTISTSTRL CCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCEEECCCEE GYRWLNGDRSWMYGINAGYDSRPMNTGDADTGVTVWNKDDVFFQQIAAGLEAVSETWNFN EEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCC AYGLFPIGDTEQSLNSHYRGGALHTYGLDVGYSITPQWNASVGYYYQHGDDLTEDDGSGV CEEEEECCCCHHHHHHHCCCCEEEEEECCCCEEECCCCCCCEEEEEECCCCCCCCCCCCC KGRLAYNISNGLTLGANLSYDEAFDTRFTADIKYRFGSNGYGAPSSKKKWKTPAIEALSA EEEEEEEECCCEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHCC TPANRDVRVHDSTKTNTTTIPTNSNL CCCCCEEEEECCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA