Click here to switch to the map view.

The map label for this gene is 124024369

Identifier: 124024369

GI number: 124024369

Start: 2367696

End: 2369273

Strand: Reverse

Name: 124024369

Synonym: P9303_26811

Alternate gene names: NA

Gene position: 2369273-2367696 (Counterclockwise)

Preceding gene: 124024370

Following gene: 124024368

Centisome position: 88.32

GC content: 37.77

Gene sequence:

>1578_bases
TTGGGGACGTCCCTGATTCATCCCCGAATGAGTCCTGATCAAGTAATTCATGGATCAAAATCCCTAGAGCTTCCCCGAAA
AGAGGAGGCACTCCACTTGCTGGAGGCCGTTCTACAAAACGCTGGATATGACGCTGGTGACCTGCAAATTGCATTAGAAG
CAATTGATCATGCCAAAAGACTTAGGAGTAATAAGAAAAAAGAGACGATATCGGACTCTTATTATATTGATAAAACTTTG
ATCTACGAAGATCATGAGGCTTTCATCTATACACGAGCAGATCACGTACGAAAGAATTGGTATTTCAGTCTCTGGGACAG
TAAGTCACATAAACCTGTCCGAAGAGCTTTAAAAACTACTGATAAGACCCAAGCCATCACAAGAGCCAGACTGCTCTATG
TTGAGATTAAAGGTAAGATTGATAGAGGAGAAAGGCTAAAATCAATTAATACTATTGAACTTATTCAGCTGTGGGATGAG
AAAGTCAAAGCACAAATTACTAATATCCCACATGAAGGCATTACGGAGGGTAGATACAAGGTAATCTTCCAGCATATAAG
GCATTGGAAAGAGTATATTGATTCTCTTGGCCTGTTAAATACAGCTATTGACAGGATAGAACCGCATAGAACAAGAGATT
TTGGAACTTATCTAAAGAACAAACCCAAGCGTGCATACAAGAATAAACCAAGGAACCTTCAGCTAATTAATAGCAATATC
AGTGAAATTAAGCGAATGTATAAAGAATTAGCTGTAAGAGATAAATATATCAGTGCATCTCAGGTTCCAGAAATAGATTT
TATAAAATCACAGAAGGAGGAGGGCTATAAACGTGATATCTTCACAGAAGAACAGTACGAAAGGCTATGGAGATATATAC
AATTTACATATGTCACTAAGAAGCACAATCCTGAGCGTACAGCAGAACAACTTGAGATAAGAAAGATTTGGAAGGAGTTC
ATATTTATTTTGTCCAATGTTGGATTTCGGCCAAAGGAACTTCTCGGAATCAGGATGCATGAGATAACTGATAATCCAAA
TTGGGATACAAAGAGAAGAGAAACAGACTTACTGATGAAGGTATGTAAGGAGAACTCAAAGACAGGTAGAGCAAGAGTTT
GCGTAGCGCCAGTGAAGAAAAGAATTGAAAGAGTTCTTGACTCATATAAAAAGCTTGGAATTACTCATGAACCAACTGAT
GTTCTCTTCATTAGCTATCAAAGGATTAGAGGTGAAGTAGAAGAACGCAAACCTTATTCAAGAGAGGTATTTGCTTGCAG
ACTGAATGAAGTACTCAAGGCTAGTGGTCTACAGGAGGAGTTAGATCGAGAAGGTAAATCAATCACTTTATATAGTTTTC
GCCATCAGTATGCTTGTTGGAGATTGAGATATGGAGATGTACCAATACACTTATTGGCCAAACAAATGGGCACATCAATT
CAGAAAATTGAACAAACCTATGGACATATTGAAGTTGAGCAACAAGCAGATTTGATAACCAAAGCTCAAGACCATATCAA
GAAAACTGGATTTATCTTAAATAAGCCTGAGGTTATAGATGAAGAGGATATTAATTAA

Upstream 100 bases:

>100_bases
CGCATCCCCGAGATTCTTGATCAGGCTGGGATAAAGAAATTGATGGATCCGTAGCATTAAATTCAGTCATACCAACTAAT
CTCGAGAATTGCGCTAAGAT

Downstream 100 bases:

>100_bases
ATAACTGAAAAAGTAGTAGGCAATAGAAGATCTACGGAAAAGACAACAAAATAAAGTCGGAGTTGATTTCGACTCATGGC
TATTAACAAGAGATTGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase; Phage Integrase

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MGTSLIHPRMSPDQVIHGSKSLELPRKEEALHLLEAVLQNAGYDAGDLQIALEAIDHAKRLRSNKKKETISDSYYIDKTL
IYEDHEAFIYTRADHVRKNWYFSLWDSKSHKPVRRALKTTDKTQAITRARLLYVEIKGKIDRGERLKSINTIELIQLWDE
KVKAQITNIPHEGITEGRYKVIFQHIRHWKEYIDSLGLLNTAIDRIEPHRTRDFGTYLKNKPKRAYKNKPRNLQLINSNI
SEIKRMYKELAVRDKYISASQVPEIDFIKSQKEEGYKRDIFTEEQYERLWRYIQFTYVTKKHNPERTAEQLEIRKIWKEF
IFILSNVGFRPKELLGIRMHEITDNPNWDTKRRETDLLMKVCKENSKTGRARVCVAPVKKRIERVLDSYKKLGITHEPTD
VLFISYQRIRGEVEERKPYSREVFACRLNEVLKASGLQEELDREGKSITLYSFRHQYACWRLRYGDVPIHLLAKQMGTSI
QKIEQTYGHIEVEQQADLITKAQDHIKKTGFILNKPEVIDEEDIN

Sequences:

>Translated_525_residues
MGTSLIHPRMSPDQVIHGSKSLELPRKEEALHLLEAVLQNAGYDAGDLQIALEAIDHAKRLRSNKKKETISDSYYIDKTL
IYEDHEAFIYTRADHVRKNWYFSLWDSKSHKPVRRALKTTDKTQAITRARLLYVEIKGKIDRGERLKSINTIELIQLWDE
KVKAQITNIPHEGITEGRYKVIFQHIRHWKEYIDSLGLLNTAIDRIEPHRTRDFGTYLKNKPKRAYKNKPRNLQLINSNI
SEIKRMYKELAVRDKYISASQVPEIDFIKSQKEEGYKRDIFTEEQYERLWRYIQFTYVTKKHNPERTAEQLEIRKIWKEF
IFILSNVGFRPKELLGIRMHEITDNPNWDTKRRETDLLMKVCKENSKTGRARVCVAPVKKRIERVLDSYKKLGITHEPTD
VLFISYQRIRGEVEERKPYSREVFACRLNEVLKASGLQEELDREGKSITLYSFRHQYACWRLRYGDVPIHLLAKQMGTSI
QKIEQTYGHIEVEQQADLITKAQDHIKKTGFILNKPEVIDEEDIN
>Mature_524_residues
GTSLIHPRMSPDQVIHGSKSLELPRKEEALHLLEAVLQNAGYDAGDLQIALEAIDHAKRLRSNKKKETISDSYYIDKTLI
YEDHEAFIYTRADHVRKNWYFSLWDSKSHKPVRRALKTTDKTQAITRARLLYVEIKGKIDRGERLKSINTIELIQLWDEK
VKAQITNIPHEGITEGRYKVIFQHIRHWKEYIDSLGLLNTAIDRIEPHRTRDFGTYLKNKPKRAYKNKPRNLQLINSNIS
EIKRMYKELAVRDKYISASQVPEIDFIKSQKEEGYKRDIFTEEQYERLWRYIQFTYVTKKHNPERTAEQLEIRKIWKEFI
FILSNVGFRPKELLGIRMHEITDNPNWDTKRRETDLLMKVCKENSKTGRARVCVAPVKKRIERVLDSYKKLGITHEPTDV
LFISYQRIRGEVEERKPYSREVFACRLNEVLKASGLQEELDREGKSITLYSFRHQYACWRLRYGDVPIHLLAKQMGTSIQ
KIEQTYGHIEVEQQADLITKAQDHIKKTGFILNKPEVIDEEDIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62037; Mature: 61906

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTSLIHPRMSPDQVIHGSKSLELPRKEEALHLLEAVLQNAGYDAGDLQIALEAIDHAKR
CCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LRSNKKKETISDSYYIDKTLIYEDHEAFIYTRADHVRKNWYFSLWDSKSHKPVRRALKTT
HHCCCHHHHCCCCEEECEEEEEECCCEEEEECHHHHHCCCEEEECCCCCCHHHHHHHHCC
DKTQAITRARLLYVEIKGKIDRGERLKSINTIELIQLWDEKVKAQITNIPHEGITEGRYK
HHHHHHHHHEEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
VIFQHIRHWKEYIDSLGLLNTAIDRIEPHRTRDFGTYLKNKPKRAYKNKPRNLQLINSNI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCCCCCEEEECCCH
SEIKRMYKELAVRDKYISASQVPEIDFIKSQKEEGYKRDIFTEEQYERLWRYIQFTYVTK
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEC
KHNPERTAEQLEIRKIWKEFIFILSNVGFRPKELLGIRMHEITDNPNWDTKRRETDLLMK
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCCCCCHHHHHHHHHH
VCKENSKTGRARVCVAPVKKRIERVLDSYKKLGITHEPTDVLFISYQRIRGEVEERKPYS
HHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCHHHCCCCH
REVFACRLNEVLKASGLQEELDREGKSITLYSFRHQYACWRLRYGDVPIHLLAKQMGTSI
HHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEHHCCCEEEEEEECCCHHHHHHHHHCHHH
QKIEQTYGHIEVEQQADLITKAQDHIKKTGFILNKPEVIDEEDIN
HHHHHHHCCEEEHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
GTSLIHPRMSPDQVIHGSKSLELPRKEEALHLLEAVLQNAGYDAGDLQIALEAIDHAKR
CCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LRSNKKKETISDSYYIDKTLIYEDHEAFIYTRADHVRKNWYFSLWDSKSHKPVRRALKTT
HHCCCHHHHCCCCEEECEEEEEECCCEEEEECHHHHHCCCEEEECCCCCCHHHHHHHHCC
DKTQAITRARLLYVEIKGKIDRGERLKSINTIELIQLWDEKVKAQITNIPHEGITEGRYK
HHHHHHHHHEEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
VIFQHIRHWKEYIDSLGLLNTAIDRIEPHRTRDFGTYLKNKPKRAYKNKPRNLQLINSNI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCCCCCEEEECCCH
SEIKRMYKELAVRDKYISASQVPEIDFIKSQKEEGYKRDIFTEEQYERLWRYIQFTYVTK
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEC
KHNPERTAEQLEIRKIWKEFIFILSNVGFRPKELLGIRMHEITDNPNWDTKRRETDLLMK
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCCCCCHHHHHHHHHH
VCKENSKTGRARVCVAPVKKRIERVLDSYKKLGITHEPTDVLFISYQRIRGEVEERKPYS
HHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCHHHCCCCH
REVFACRLNEVLKASGLQEELDREGKSITLYSFRHQYACWRLRYGDVPIHLLAKQMGTSI
HHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEHHCCCEEEEEEECCCHHHHHHHHHCHHH
QKIEQTYGHIEVEQQADLITKAQDHIKKTGFILNKPEVIDEEDIN
HHHHHHHCCEEEHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA