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The map label for this gene is 124024320

Identifier: 124024320

GI number: 124024320

Start: 2323112

End: 2324743

Strand: Reverse

Name: 124024320

Synonym: P9303_26321

Alternate gene names: NA

Gene position: 2324743-2323112 (Counterclockwise)

Preceding gene: 124024321

Following gene: 124024319

Centisome position: 86.66

GC content: 54.11

Gene sequence:

>1632_bases
ATGAAACTCTTCCAGCAATTGCTGGTGGCACCTGCTGCCTTGGGCCTGATGGCCCCTATGGCTGCTAATGCCGCAGACCT
AGACATCAAAGGTGTGTCCGATTATTCGGCCTCCAGCGAGCAGGTCACCAGCATCTCCCAATTCCAAGATGTTTACCCAA
CCGACTGGGCTTATCAGGCTCTGAGCAACCTGATTGAGCGCTATGGCTGTGTAGCTGGCTATCCAAGCGGTAGCTACCTG
GGCAACAGAGCAATGACCCGCTTTGAAGCGGCTGCTCTATTGAATGCTTGCCTCGATCGCATCACTGAGGTCACCGACGA
ACTGCGTCGTCTTCTCAACGAATTCGAGCAGGAGCTCGCCATCCTCAAGGGCCGTGTTGATGGGCTAGAAGCCCGCGTTG
GTGAACTCGAAGCCACTCAGTTCTCCACCACTACCAAGCTTGTTGGTCAGACATCCTTCATTGTTGGTGCCAACAGCTTC
GCCGGTGATGCCGAGGATGTTTTCGGTGATGATCGTGATGACGAAGCTGCCGCATCAGATGGCGCGACTGTCTTCAACTA
CGACATGCGCCTTGAGCTCAATACCAGCTTCACTGGTAAAGACTTACTGAAGACACGCCTGCGTGCTGGCAACTTTGCTA
AATCTCCCTACAGCGGCAATGGCTATGTCGGCCTTTCTGCCCTGGAAGTGGCTTTCCCAGGTGATGAAGATCACAACGAT
GTAGTCAAAGTTGATCGTCTCTGGTATCAGTTCCCACTCGGCGAAGAGTTCACCGTAACCGCTGGCGCCATGGTCCGCCA
GGACAACATGCTTGCCGTATGGCCTAGCAACTATCCGTCCGAAACCATCCTTGACGTCTTCACCTATGCAGGTGCCCCTG
GCGCCTACAGCCTCACCAAAGGTGGTGGTGCTGGCATCTGGTGGGATGACAACGATAGCGGCTGGAGCATTAGCGCTAGC
TACGTTTCTGGCAATGCTGATGATGGCAATCCCAACACTGGTGGGGTTGGCACAGATGGTGCTGCTTCCAATGCAACGGC
TCAAATTGCATACGCCCAGGACCAGTGGGGCATTGCAGCTGCTTACTCCTACACCTCTGGAGACAATGGCGCCGGCATCT
ACCCTGGCAATGCCACACCTTTGGCTGTTTCATTGGCCGGATCAGGTACGACCAATTCCTATGCCGTGAGTGCCTGGTGG
GCTCCAGAAGACACCGGTTGGTTCCCAAGCATCAGCGCTGGTTGGGGTCTTAACGACGTCAACGAGAACGATGACTCCGA
TCTGATTGACAATGCGACATCCCAGTCTTGGTATGTCGGAGTTCAGTGGGAAGATGCATTTATCGAGGGCAATGTGCTTG
GCGCTGCTGTGGGTCAGCCCACCTTCGTCACTGCCGTCGACTATGACAGCGATGTCGATGCCTCCGATTTCGTTGCTGAT
GGCAACTATGCCTTTGAACTCTGGTACAAGTTCCAGGTCACCGATAACATCTCTGTGACTCCTGCTGTTTATTACCTCAG
TCGTCCTTTGGGTGATCTCACCGATGGTGGTGGCCCTGTGTTCGGTGGTGGTCGTAGCGACGACACCTTCAGCAACTTTG
GTGGTTTAGTTAGAACCACATTTAAGTTCTGA

Upstream 100 bases:

>100_bases
TTGCAACCATTGATACATCTGTCACACCAAGTGGTGTTTAATCAGAAGTTAATGACCAACATTGACTCGGCGCATTGCGC
CTATCTGTGTGAGGAACCAA

Downstream 100 bases:

>100_bases
TCGAAATGGCCCAACATCATTAGTTGGGCCTCAGAAGCTACTCCTCACAATCTCTATCAATTGCCGCCCTCCGCAAACGG
GGGGCTTTTTTATGTTCTGA

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MKLFQQLLVAPAALGLMAPMAANAADLDIKGVSDYSASSEQVTSISQFQDVYPTDWAYQALSNLIERYGCVAGYPSGSYL
GNRAMTRFEAAALLNACLDRITEVTDELRRLLNEFEQELAILKGRVDGLEARVGELEATQFSTTTKLVGQTSFIVGANSF
AGDAEDVFGDDRDDEAAASDGATVFNYDMRLELNTSFTGKDLLKTRLRAGNFAKSPYSGNGYVGLSALEVAFPGDEDHND
VVKVDRLWYQFPLGEEFTVTAGAMVRQDNMLAVWPSNYPSETILDVFTYAGAPGAYSLTKGGGAGIWWDDNDSGWSISAS
YVSGNADDGNPNTGGVGTDGAASNATAQIAYAQDQWGIAAAYSYTSGDNGAGIYPGNATPLAVSLAGSGTTNSYAVSAWW
APEDTGWFPSISAGWGLNDVNENDDSDLIDNATSQSWYVGVQWEDAFIEGNVLGAAVGQPTFVTAVDYDSDVDASDFVAD
GNYAFELWYKFQVTDNISVTPAVYYLSRPLGDLTDGGGPVFGGGRSDDTFSNFGGLVRTTFKF

Sequences:

>Translated_543_residues
MKLFQQLLVAPAALGLMAPMAANAADLDIKGVSDYSASSEQVTSISQFQDVYPTDWAYQALSNLIERYGCVAGYPSGSYL
GNRAMTRFEAAALLNACLDRITEVTDELRRLLNEFEQELAILKGRVDGLEARVGELEATQFSTTTKLVGQTSFIVGANSF
AGDAEDVFGDDRDDEAAASDGATVFNYDMRLELNTSFTGKDLLKTRLRAGNFAKSPYSGNGYVGLSALEVAFPGDEDHND
VVKVDRLWYQFPLGEEFTVTAGAMVRQDNMLAVWPSNYPSETILDVFTYAGAPGAYSLTKGGGAGIWWDDNDSGWSISAS
YVSGNADDGNPNTGGVGTDGAASNATAQIAYAQDQWGIAAAYSYTSGDNGAGIYPGNATPLAVSLAGSGTTNSYAVSAWW
APEDTGWFPSISAGWGLNDVNENDDSDLIDNATSQSWYVGVQWEDAFIEGNVLGAAVGQPTFVTAVDYDSDVDASDFVAD
GNYAFELWYKFQVTDNISVTPAVYYLSRPLGDLTDGGGPVFGGGRSDDTFSNFGGLVRTTFKF
>Mature_543_residues
MKLFQQLLVAPAALGLMAPMAANAADLDIKGVSDYSASSEQVTSISQFQDVYPTDWAYQALSNLIERYGCVAGYPSGSYL
GNRAMTRFEAAALLNACLDRITEVTDELRRLLNEFEQELAILKGRVDGLEARVGELEATQFSTTTKLVGQTSFIVGANSF
AGDAEDVFGDDRDDEAAASDGATVFNYDMRLELNTSFTGKDLLKTRLRAGNFAKSPYSGNGYVGLSALEVAFPGDEDHND
VVKVDRLWYQFPLGEEFTVTAGAMVRQDNMLAVWPSNYPSETILDVFTYAGAPGAYSLTKGGGAGIWWDDNDSGWSISAS
YVSGNADDGNPNTGGVGTDGAASNATAQIAYAQDQWGIAAAYSYTSGDNGAGIYPGNATPLAVSLAGSGTTNSYAVSAWW
APEDTGWFPSISAGWGLNDVNENDDSDLIDNATSQSWYVGVQWEDAFIEGNVLGAAVGQPTFVTAVDYDSDVDASDFVAD
GNYAFELWYKFQVTDNISVTPAVYYLSRPLGDLTDGGGPVFGGGRSDDTFSNFGGLVRTTFKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 57928; Mature: 57928

Theoretical pI: Translated: 3.79; Mature: 3.79

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFQQLLVAPAALGLMAPMAANAADLDIKGVSDYSASSEQVTSISQFQDVYPTDWAYQA
CHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
LSNLIERYGCVAGYPSGSYLGNRAMTRFEAAALLNACLDRITEVTDELRRLLNEFEQELA
HHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKGRVDGLEARVGELEATQFSTTTKLVGQTSFIVGANSFAGDAEDVFGDDRDDEAAASD
HHHCCCCCHHHHHCCCCCCCHHHHHHHHCCEEEEEECCCCCCCHHHHCCCCCCCHHHCCC
GATVFNYDMRLELNTSFTGKDLLKTRLRAGNFAKSPYSGNGYVGLSALEVAFPGDEDHND
CCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCC
VVKVDRLWYQFPLGEEFTVTAGAMVRQDNMLAVWPSNYPSETILDVFTYAGAPGAYSLTK
CEEEEEEEEECCCCCCEEEECCEEEECCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEEC
GGGAGIWWDDNDSGWSISASYVSGNADDGNPNTGGVGTDGAASNATAQIAYAQDQWGIAA
CCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEE
AYSYTSGDNGAGIYPGNATPLAVSLAGSGTTNSYAVSAWWAPEDTGWFPSISAGWGLNDV
EEEECCCCCCCEECCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
NENDDSDLIDNATSQSWYVGVQWEDAFIEGNVLGAAVGQPTFVTAVDYDSDVDASDFVAD
CCCCCCHHHCCCCCCCEEEEEEEECEEEECCEEEEECCCCEEEEEECCCCCCCHHHEEEC
GNYAFELWYKFQVTDNISVTPAVYYLSRPLGDLTDGGGPVFGGGRSDDTFSNFGGLVRTT
CCEEEEEEEEEEECCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEE
FKF
ECC
>Mature Secondary Structure
MKLFQQLLVAPAALGLMAPMAANAADLDIKGVSDYSASSEQVTSISQFQDVYPTDWAYQA
CHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
LSNLIERYGCVAGYPSGSYLGNRAMTRFEAAALLNACLDRITEVTDELRRLLNEFEQELA
HHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKGRVDGLEARVGELEATQFSTTTKLVGQTSFIVGANSFAGDAEDVFGDDRDDEAAASD
HHHCCCCCHHHHHCCCCCCCHHHHHHHHCCEEEEEECCCCCCCHHHHCCCCCCCHHHCCC
GATVFNYDMRLELNTSFTGKDLLKTRLRAGNFAKSPYSGNGYVGLSALEVAFPGDEDHND
CCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCC
VVKVDRLWYQFPLGEEFTVTAGAMVRQDNMLAVWPSNYPSETILDVFTYAGAPGAYSLTK
CEEEEEEEEECCCCCCEEEECCEEEECCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEEC
GGGAGIWWDDNDSGWSISASYVSGNADDGNPNTGGVGTDGAASNATAQIAYAQDQWGIAA
CCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEE
AYSYTSGDNGAGIYPGNATPLAVSLAGSGTTNSYAVSAWWAPEDTGWFPSISAGWGLNDV
EEEECCCCCCCEECCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
NENDDSDLIDNATSQSWYVGVQWEDAFIEGNVLGAAVGQPTFVTAVDYDSDVDASDFVAD
CCCCCCHHHCCCCCCCEEEEEEEECEEEECCEEEEECCCCEEEEEECCCCCCCHHHEEEC
GNYAFELWYKFQVTDNISVTPAVYYLSRPLGDLTDGGGPVFGGGRSDDTFSNFGGLVRTT
CCEEEEEEEEEEECCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEE
FKF
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]