| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024285
Identifier: 124024285
GI number: 124024285
Start: 2292465
End: 2292923
Strand: Reverse
Name: 124024285
Synonym: P9303_25961
Alternate gene names: NA
Gene position: 2292923-2292465 (Counterclockwise)
Preceding gene: 124024286
Following gene: 124024283
Centisome position: 85.47
GC content: 51.85
Gene sequence:
>459_bases GTGCCTGAAGAGCCCTGTCAATGCCCTGACTGTCAAAGGTTTTACCGGGAGCATGATCGGCTGATTCGTGAGTGCCCTAC CTTGCGTCATCAGCAGGAGCTCAATTGGGCTGCGTTGCAGTCTTTTCGAACACTTTCTGGTCGTGTTCTAGAAGATCTGC AGAAGCAATATGGTTCCCAAGCCAATGAGGCTGCTAATACTCAGGCCACTCCTGTTGGTGGGGGAGAAGAGCCAGCTGAT GCAATCCAGCAATCGATCGCTGATTTGGAGAACATCAATGCGCACCTGTTCTCCATCGAAGCCCTGATGGAACGCATCTT TGATGTGAAGGTGCCAGAAGCTGTTGAGCAGAAATTCCGAGAACTTGCAGGTGAACTAGCTCCAGATCCTCTCAATGCAG ACCGGCTTCGCCTCAACCGTCTTCTGCATCAGACCCCTGATTTGCCTGATCGCAGTTAG
Upstream 100 bases:
>100_bases GCTCCAGGTGATACAGATTCGGGTGAGGGCAGTTTTTCAAGCGAGCCTCCTCTTGCGGCTTAGTAGATGGCATGATGGGA TGTGAGCTAGACGGAGTGCG
Downstream 100 bases:
>100_bases TTTTTCGACCCATCGTTTATTGATTCTTCAGGGCACATCGCAGGTAATTTCTACGGGGAAGGGCTCAGCTTTCCAGATTG TCTGACAGTAGTCTTGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MPEEPCQCPDCQRFYREHDRLIRECPTLRHQQELNWAALQSFRTLSGRVLEDLQKQYGSQANEAANTQATPVGGGEEPAD AIQQSIADLENINAHLFSIEALMERIFDVKVPEAVEQKFRELAGELAPDPLNADRLRLNRLLHQTPDLPDRS
Sequences:
>Translated_152_residues MPEEPCQCPDCQRFYREHDRLIRECPTLRHQQELNWAALQSFRTLSGRVLEDLQKQYGSQANEAANTQATPVGGGEEPAD AIQQSIADLENINAHLFSIEALMERIFDVKVPEAVEQKFRELAGELAPDPLNADRLRLNRLLHQTPDLPDRS >Mature_151_residues PEEPCQCPDCQRFYREHDRLIRECPTLRHQQELNWAALQSFRTLSGRVLEDLQKQYGSQANEAANTQATPVGGGEEPADA IQQSIADLENINAHLFSIEALMERIFDVKVPEAVEQKFRELAGELAPDPLNADRLRLNRLLHQTPDLPDRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17303; Mature: 17171
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEEPCQCPDCQRFYREHDRLIRECPTLRHQQELNWAALQSFRTLSGRVLEDLQKQYGSQ CCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ANEAANTQATPVGGGEEPADAIQQSIADLENINAHLFSIEALMERIFDVKVPEAVEQKFR HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ELAGELAPDPLNADRLRLNRLLHQTPDLPDRS HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PEEPCQCPDCQRFYREHDRLIRECPTLRHQQELNWAALQSFRTLSGRVLEDLQKQYGSQ CCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ANEAANTQATPVGGGEEPADAIQQSIADLENINAHLFSIEALMERIFDVKVPEAVEQKFR HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ELAGELAPDPLNADRLRLNRLLHQTPDLPDRS HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA