| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024257
Identifier: 124024257
GI number: 124024257
Start: 2264691
End: 2265791
Strand: Reverse
Name: 124024257
Synonym: P9303_25681
Alternate gene names: NA
Gene position: 2265791-2264691 (Counterclockwise)
Preceding gene: 124024258
Following gene: 124024256
Centisome position: 84.46
GC content: 54.59
Gene sequence:
>1101_bases TTGCAATCGTCAGATTTGATCAAACTGCGGCATAGTTCTGCATCGGTTAGTCCCCTCGCCCCTGTGCGTCGCGTCTTTTT TCTGGTTCCAGGGACTACGGATCGCTATCGCTGCGGTGGTCTTTCAGTGGCGCTCCATACCGCAAGGTTGGTGAACAGGC TTATGCCTACTGATTTGGTCACCTATCGGACCCGTCAGGACGATTATCTGTTTTTGGATGATCTTTTGCAGCAAGAACCA GCTCCAGGGGAAACACTTTGGGTGGTGAGCTGGGGGTTTGAAGTGCCGAAGTTATTGCGGCGTCTAAGGGGGCGGCATGT GATTTATCACGCCCATAGCAGCGGCTATGGATTTGATCTTCCATCAGGGGTTCCTGTCTTCGCTGTGAGCAGGAATACCC TTGGCTACTGGGGTGACCGGGCACCTCGCAATCCTCTTTTTTTGGTGCCTAATGCCTTAGAACCCCATTGGTTGGAGAGA GGTGCTCGGCTTGGAGCAGCTGTGGCTGAAGCTGGAGATCGCTCCATCGATGTCTTGGTGCAGGAGCGAAAGAGTAGCCG TTATGTGTTGGGGCAATTGGTTCCTGCCTTGAGAAAGCTAGGGCTGAAGGTTGTGGTTCAGAGTGGCTGGGTGGAGGATC TGGTCGCTCTGTTCAACGCTTCCAAGGTTTATATCTACGATTCGGCTGAGTATTGGCGGAGTAATGGCCTGAGTGAGGGC TTTGGCTTGCCCCCTCTAGAGGCGATGGCTTGCGGCTGCGTTGTGTTCAGCAGTTTCAACCATGCGCTCGCCGATACCCT TGAGCCGAGTGTGGTGGGCCATCAGATTGGTTGCGGCAGTCTCGCCTGGGATGTGCGACGGATTTGCGAATCTGTGCGAG AGCCGGCGGCTTGGCGTCCAACGCAGGAGCGGCTCAATCAGCTGTTAAGTGAACATACGGAAACGGCTTTGATGTCGCGT TGGAGATCGGCGCTGGCTGCTATTGAGACCATGCCGTCAGATGAAGTGCCCCTCAGGAGGTCTCCAACCTTGGTGTTGCG ATTCAATCGAAAGGTTGGCCGAATATTGAGGCTTTTGAGACGGCTGATCTCTCGCCGCTAA
Upstream 100 bases:
>100_bases ATCGCAACCTGGTGACTGCAATTGGGAAGGTCCTGTTTGTGGATTGCTCACGTGCCGCCAACGAGCTAGCAGCATCGAGG ATGTGGTGGGCTGAGGGGCT
Downstream 100 bases:
>100_bases TTGTGGCTTGTGTCTTTCTGATGAGCTGCTGCATCGACTAAGGGGCTTGGGGAGGGTCAATCGGTTACCTGGCTGGCCGA CCTGTTGCTGATTGTGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MQSSDLIKLRHSSASVSPLAPVRRVFFLVPGTTDRYRCGGLSVALHTARLVNRLMPTDLVTYRTRQDDYLFLDDLLQQEP APGETLWVVSWGFEVPKLLRRLRGRHVIYHAHSSGYGFDLPSGVPVFAVSRNTLGYWGDRAPRNPLFLVPNALEPHWLER GARLGAAVAEAGDRSIDVLVQERKSSRYVLGQLVPALRKLGLKVVVQSGWVEDLVALFNASKVYIYDSAEYWRSNGLSEG FGLPPLEAMACGCVVFSSFNHALADTLEPSVVGHQIGCGSLAWDVRRICESVREPAAWRPTQERLNQLLSEHTETALMSR WRSALAAIETMPSDEVPLRRSPTLVLRFNRKVGRILRLLRRLISRR
Sequences:
>Translated_366_residues MQSSDLIKLRHSSASVSPLAPVRRVFFLVPGTTDRYRCGGLSVALHTARLVNRLMPTDLVTYRTRQDDYLFLDDLLQQEP APGETLWVVSWGFEVPKLLRRLRGRHVIYHAHSSGYGFDLPSGVPVFAVSRNTLGYWGDRAPRNPLFLVPNALEPHWLER GARLGAAVAEAGDRSIDVLVQERKSSRYVLGQLVPALRKLGLKVVVQSGWVEDLVALFNASKVYIYDSAEYWRSNGLSEG FGLPPLEAMACGCVVFSSFNHALADTLEPSVVGHQIGCGSLAWDVRRICESVREPAAWRPTQERLNQLLSEHTETALMSR WRSALAAIETMPSDEVPLRRSPTLVLRFNRKVGRILRLLRRLISRR >Mature_366_residues MQSSDLIKLRHSSASVSPLAPVRRVFFLVPGTTDRYRCGGLSVALHTARLVNRLMPTDLVTYRTRQDDYLFLDDLLQQEP APGETLWVVSWGFEVPKLLRRLRGRHVIYHAHSSGYGFDLPSGVPVFAVSRNTLGYWGDRAPRNPLFLVPNALEPHWLER GARLGAAVAEAGDRSIDVLVQERKSSRYVLGQLVPALRKLGLKVVVQSGWVEDLVALFNASKVYIYDSAEYWRSNGLSEG FGLPPLEAMACGCVVFSSFNHALADTLEPSVVGHQIGCGSLAWDVRRICESVREPAAWRPTQERLNQLLSEHTETALMSR WRSALAAIETMPSDEVPLRRSPTLVLRFNRKVGRILRLLRRLISRR
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41131; Mature: 41131
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSSDLIKLRHSSASVSPLAPVRRVFFLVPGTTDRYRCGGLSVALHTARLVNRLMPTDLV CCCCCEEEEECCCCCCCCHHHHHHEEEECCCCCCCEECCCHHHHHHHHHHHHHHCCCHHH TYRTRQDDYLFLDDLLQQEPAPGETLWVVSWGFEVPKLLRRLRGRHVIYHAHSSGYGFDL EEECCCCCEEHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEECCCCCCCCC PSGVPVFAVSRNTLGYWGDRAPRNPLFLVPNALEPHWLERGARLGAAVAEAGDRSIDVLV CCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH QERKSSRYVLGQLVPALRKLGLKVVVQSGWVEDLVALFNASKVYIYDSAEYWRSNGLSEG HHHCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCEEEEEECHHHHHHCCCCCC FGLPPLEAMACGCVVFSSFNHALADTLEPSVVGHQIGCGSLAWDVRRICESVREPAAWRP CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC TQERLNQLLSEHTETALMSRWRSALAAIETMPSDEVPLRRSPTLVLRFNRKVGRILRLLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHH RLISRR HHHHCC >Mature Secondary Structure MQSSDLIKLRHSSASVSPLAPVRRVFFLVPGTTDRYRCGGLSVALHTARLVNRLMPTDLV CCCCCEEEEECCCCCCCCHHHHHHEEEECCCCCCCEECCCHHHHHHHHHHHHHHCCCHHH TYRTRQDDYLFLDDLLQQEPAPGETLWVVSWGFEVPKLLRRLRGRHVIYHAHSSGYGFDL EEECCCCCEEHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEECCCCCCCCC PSGVPVFAVSRNTLGYWGDRAPRNPLFLVPNALEPHWLERGARLGAAVAEAGDRSIDVLV CCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH QERKSSRYVLGQLVPALRKLGLKVVVQSGWVEDLVALFNASKVYIYDSAEYWRSNGLSEG HHHCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCEEEEEECHHHHHHCCCCCC FGLPPLEAMACGCVVFSSFNHALADTLEPSVVGHQIGCGSLAWDVRRICESVREPAAWRP CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC TQERLNQLLSEHTETALMSRWRSALAAIETMPSDEVPLRRSPTLVLRFNRKVGRILRLLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHH RLISRR HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA