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The map label for this gene is rfaB [C]

Identifier: 124024254

GI number: 124024254

Start: 2259255

End: 2260469

Strand: Reverse

Name: rfaB [C]

Synonym: P9303_25651

Alternate gene names: 124024254

Gene position: 2260469-2259255 (Counterclockwise)

Preceding gene: 124024255

Following gene: 124024253

Centisome position: 84.26

GC content: 53.99

Gene sequence:

>1215_bases
ATGAAGGATGTGGTTGATGTCTCATCGCCACGAGTGCTTTTGTATGTTGACTCTTTGAAAATTGGGGGTGCGGAGAGGAT
CACTCTCACCCTTGCTCAGTGGTTGTATCAGGAAGGTTGGACTCCAGTTGTTTTAACCCGTCAGCCTTTGGGAAGGGATT
TTTACCCGATTCCGGCTGGAGTTGAGAGGGCCGCAGAGCCTGTTGATCCAGATTGGCTCAAGAGGCTGCGTTGGTTTGGT
TTCCCATGGCGGGTCCAGCGTTTGCGGTGTTGGATTCGGCGTGAGCGGGTTGCCGTGGCTATTGGTATGACAACGTTGCC
AGCCATCAAGCTGCTTCTCGCTACACGCCCTCTGGCTGTGCCATGCGTTGTTTCTGAGCGGAACTATCCACCGGCTAAGC
GACTTGCTATGCCTTGGCGGTTGTTAAGACGTTTGACCTATCCATGGGCAGATCTCCATCTGGTGCAGACCCGATCAACG
GGCCAGTGGCTTGCGAACAAGGTTGGAGCCAAGCATCAGCTGCTGTTGCCGAATCCCGTGCAGTGGCCACTGCCACGTTT
TGATCCTGCCCCTGACCCAGAGTCGTGGCTTGCGGCTGCCGGGGTGGTTGCAGATGACCCTCTCATTTTGGCTGCTGGCA
CCAAGGCCTATCAAAAGGGTTTCGATCGCTTGATGCAGACCTTTGCCTTATTGGCAGCTCGCTCGCCAAGGGTGCAGCTC
GTGATTTTGGGCCTTGCGTCGAAGACCTATCACGGCATGGATCAGCAGGCCAATTTGCGAGCTCTGCTTGCTCAACATGG
TGACTTTCAGGCTCGACTTCACTTCCCGGGGCGCGTTGGCAACATGATGGATTGGTATCAACGTGCTGGGATTTATGTTC
TTCCCTCGCGTTATGAGGGTTTCCCTAACGTGTTATTGGAGGCCATGGCGGCAGGCTGTGCTTGTGTTGCCTCTGATTGC
CTCACTGGCCCAGCCGATTTGATTGAGAATGGTCGTAATGGGCTGTTAATGCCTGTGGATGCTTCTCCCATGGATTGGGC
TGAGGCTTTGGCTGAGCTTTTGGCCGATACAACGCGGCGCCGTTCATTAGCCAAACAAGCATTAGATGTTCACGAGCGCT
TTGCTCAACAGGTTTTGCGTCAGAGTTTCTGTAAAGCTCTGGCAGGCTTGCAAATAGCAGATCATCAGGGCATTCGGAAT
GGCAAAGATGGATGA

Upstream 100 bases:

>100_bases
AATTATTGCGATTAATGGTTAAGAATAAGGGATTATCACTTGATGGAGTGTTGCCCTTATTCCCTGAGTATCTAGATACT
AAAGTGGCTGAGGTCTGTCA

Downstream 100 bases:

>100_bases
TCTTTGGCTGGTGTTGCCTCATTTGGGGCCGGGTGGTGCCCAAAAGGTTGCTCTTCTCGCTGCTGATCACTTCGCGGCTC
AGGGGCTAAGCCTGCGTGTT

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: Stealth protein SCO2592 [H]

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKDVVDVSSPRVLLYVDSLKIGGAERITLTLAQWLYQEGWTPVVLTRQPLGRDFYPIPAGVERAAEPVDPDWLKRLRWFG
FPWRVQRLRCWIRRERVAVAIGMTTLPAIKLLLATRPLAVPCVVSERNYPPAKRLAMPWRLLRRLTYPWADLHLVQTRST
GQWLANKVGAKHQLLLPNPVQWPLPRFDPAPDPESWLAAAGVVADDPLILAAGTKAYQKGFDRLMQTFALLAARSPRVQL
VILGLASKTYHGMDQQANLRALLAQHGDFQARLHFPGRVGNMMDWYQRAGIYVLPSRYEGFPNVLLEAMAAGCACVASDC
LTGPADLIENGRNGLLMPVDASPMDWAEALAELLADTTRRRSLAKQALDVHERFAQQVLRQSFCKALAGLQIADHQGIRN
GKDG

Sequences:

>Translated_404_residues
MKDVVDVSSPRVLLYVDSLKIGGAERITLTLAQWLYQEGWTPVVLTRQPLGRDFYPIPAGVERAAEPVDPDWLKRLRWFG
FPWRVQRLRCWIRRERVAVAIGMTTLPAIKLLLATRPLAVPCVVSERNYPPAKRLAMPWRLLRRLTYPWADLHLVQTRST
GQWLANKVGAKHQLLLPNPVQWPLPRFDPAPDPESWLAAAGVVADDPLILAAGTKAYQKGFDRLMQTFALLAARSPRVQL
VILGLASKTYHGMDQQANLRALLAQHGDFQARLHFPGRVGNMMDWYQRAGIYVLPSRYEGFPNVLLEAMAAGCACVASDC
LTGPADLIENGRNGLLMPVDASPMDWAEALAELLADTTRRRSLAKQALDVHERFAQQVLRQSFCKALAGLQIADHQGIRN
GKDG
>Mature_404_residues
MKDVVDVSSPRVLLYVDSLKIGGAERITLTLAQWLYQEGWTPVVLTRQPLGRDFYPIPAGVERAAEPVDPDWLKRLRWFG
FPWRVQRLRCWIRRERVAVAIGMTTLPAIKLLLATRPLAVPCVVSERNYPPAKRLAMPWRLLRRLTYPWADLHLVQTRST
GQWLANKVGAKHQLLLPNPVQWPLPRFDPAPDPESWLAAAGVVADDPLILAAGTKAYQKGFDRLMQTFALLAARSPRVQL
VILGLASKTYHGMDQQANLRALLAQHGDFQARLHFPGRVGNMMDWYQRAGIYVLPSRYEGFPNVLLEAMAAGCACVASDC
LTGPADLIENGRNGLLMPVDASPMDWAEALAELLADTTRRRSLAKQALDVHERFAQQVLRQSFCKALAGLQIADHQGIRN
GKDG

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the stealth family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 45184; Mature: 45184

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVVDVSSPRVLLYVDSLKIGGAERITLTLAQWLYQEGWTPVVLTRQPLGRDFYPIPAG
CCCCCCCCCCEEEEEEECEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC
VERAAEPVDPDWLKRLRWFGFPWRVQRLRCWIRRERVAVAIGMTTLPAIKLLLATRPLAV
HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHCCCCEE
PCVVSERNYPPAKRLAMPWRLLRRLTYPWADLHLVQTRSTGQWLANKVGAKHQLLLPNPV
EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCCEEECCCCC
QWPLPRFDPAPDPESWLAAAGVVADDPLILAAGTKAYQKGFDRLMQTFALLAARSPRVQL
CCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEE
VILGLASKTYHGMDQQANLRALLAQHGDFQARLHFPGRVGNMMDWYQRAGIYVLPSRYEG
EEEEECCHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCEEEECCCCCC
FPNVLLEAMAAGCACVASDCLTGPADLIENGRNGLLMPVDASPMDWAEALAELLADTTRR
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH
RSLAKQALDVHERFAQQVLRQSFCKALAGLQIADHQGIRNGKDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCC
>Mature Secondary Structure
MKDVVDVSSPRVLLYVDSLKIGGAERITLTLAQWLYQEGWTPVVLTRQPLGRDFYPIPAG
CCCCCCCCCCEEEEEEECEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC
VERAAEPVDPDWLKRLRWFGFPWRVQRLRCWIRRERVAVAIGMTTLPAIKLLLATRPLAV
HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHCCCCEE
PCVVSERNYPPAKRLAMPWRLLRRLTYPWADLHLVQTRSTGQWLANKVGAKHQLLLPNPV
EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCCEEECCCCC
QWPLPRFDPAPDPESWLAAAGVVADDPLILAAGTKAYQKGFDRLMQTFALLAARSPRVQL
CCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEE
VILGLASKTYHGMDQQANLRALLAQHGDFQARLHFPGRVGNMMDWYQRAGIYVLPSRYEG
EEEEECCHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCEEEECCCCCC
FPNVLLEAMAAGCACVASDCLTGPADLIENGRNGLLMPVDASPMDWAEALAELLADTTRR
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH
RSLAKQALDVHERFAQQVLRQSFCKALAGLQIADHQGIRNGKDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]