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The map label for this gene is 124024197

Identifier: 124024197

GI number: 124024197

Start: 2204885

End: 2205079

Strand: Reverse

Name: 124024197

Synonym: P9303_25081

Alternate gene names: NA

Gene position: 2205079-2204885 (Counterclockwise)

Preceding gene: 124024198

Following gene: 124024195

Centisome position: 82.2

GC content: 48.72

Gene sequence:

>195_bases
ATGCCATTGATGGTGCCACGCCCTGGCAGTGAAGCTGAGGATGATGGTTGGCTGTTGGTTTTTGTATGGAATGGAGAGCG
TCGTGCCAGTCAGTTGTTGATTTTGAATGCAAACGATTTAAGCGAGCAGGCAGTGCTTGAGATGCCTATTACCATTCCAT
ACGGATTACATGGCAGCTGGGTTGCTGCTGATTGA

Upstream 100 bases:

>100_bases
TCGGCAGCAATGGATCAGCTCAATCAGCGCTTAGTCACAGTTCGCAGTCGCGTGCGGCCACTCATCCTTGATGATCTAAA
GATTCCTGCTCCACGCAGTT

Downstream 100 bases:

>100_bases
TTGATTGAGTTTAGGGTGTTAATTGGCGAACAAATTCCAAGCTTATTTTGAATTTGTTCGCTCTAAACTTCAGGATTTGG
TTGGTTGACTAGATAAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: ACO; 8'-apo-beta-carotenal 15,15'-oxygenase; Diox1 [H]

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MPLMVPRPGSEAEDDGWLLVFVWNGERRASQLLILNANDLSEQAVLEMPITIPYGLHGSWVAAD

Sequences:

>Translated_64_residues
MPLMVPRPGSEAEDDGWLLVFVWNGERRASQLLILNANDLSEQAVLEMPITIPYGLHGSWVAAD
>Mature_63_residues
PLMVPRPGSEAEDDGWLLVFVWNGERRASQLLILNANDLSEQAVLEMPITIPYGLHGSWVAAD

Specific function: Cleaves a number of carotenals and carotenols in the all-trans configuration at the 15-15' double bond producing retinal or retinol, respectively. Also shows activity toward lycopenals and the corresponding alcohols. Does not cleave beta- carotene or lyco

COG id: COG3670

COG function: function code Q; Lignostilbene-alpha,beta-dioxygenase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid oxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004294 [H]

Pfam domain/function: PF03055 RPE65 [H]

EC number: =1.14.99.41 [H]

Molecular weight: Translated: 7091; Mature: 6960

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLMVPRPGSEAEDDGWLLVFVWNGERRASQLLILNANDLSEQAVLEMPITIPYGLHGSW
CCEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCEE
VAAD
EECC
>Mature Secondary Structure 
PLMVPRPGSEAEDDGWLLVFVWNGERRASQLLILNANDLSEQAVLEMPITIPYGLHGSW
CEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCEE
VAAD
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]